Free for academic non-profit institutions. Other users need a Commercial license

Aliases for OR13C7 Gene

Aliases for OR13C7 Gene

  • Olfactory Receptor Family 13 Subfamily C Member 7 (Gene/Pseudogene) 2 3 5
  • Olfactory Receptor, Family 13, Subfamily C, Member 7 Pseudogene 2 3
  • OR13C7P 3 4
  • Olfactory Receptor, Family 13, Subfamily C, Member 7 (Gene/Pseudogene) 2
  • OST706 3
  • OR37C 3

External Ids for OR13C7 Gene

Previous HGNC Symbols for OR13C7 Gene

  • OR13C7P

Previous GeneCards Identifiers for OR13C7 Gene

  • GC09U990182

Summaries for OR13C7 Gene

Entrez Gene Summary for OR13C7 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. This olfactory receptor gene is a segregating pseudogene, where some individuals have an allele that encodes a functional olfactory receptor, while other individuals have an allele encoding a protein that is predicted to be non-functional. [provided by RefSeq, Jan 2017]

GeneCards Summary for OR13C7 Gene

OR13C7 (Olfactory Receptor Family 13 Subfamily C Member 7 (Gene/Pseudogene)) is a Protein Coding gene. GO annotations related to this gene include G-protein coupled receptor activity. An important paralog of this gene is OR2S2.

UniProtKB/Swiss-Prot for OR13C7 Gene

  • Odorant receptor.

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR13C7 Gene

Genomics for OR13C7 Gene

Regulatory Elements for OR13C7 Gene

Enhancers for OR13C7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G036005 0.9 ENCODE 0.7 -2.7 -2673 1.1 HDAC1 PKNOX1 TBL1XR1 ARNT TCF12 ZNF766 ELK1 GATA2 ETV6 CREM OR13C6P OR13C7 OR2S1P
GH09G036008 0.8 ENCODE 0.4 -5.1 -5122 0.2 RB1 SIN3A ZSCAN9 RAD21 RFX5 ZNF143 DEK THAP11 ZNF654 NFYA ENSG00000227388 NPR2 OR2S1P OR13C7
GH09G035995 0.4 ENCODE 0.4 +6.9 6871 2.7 JUND TRIM24 OR13C6P OR2S1P HRCT1 OR13C7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR13C7 on UCSC Golden Path with GeneCards custom track

Genomic Location for OR13C7 Gene

Chromosome:
9
Start:
36,002,909 bp from pter
End:
36,003,867 bp from pter
Size:
959 bases
Orientation:
Minus strand

Genomic View for OR13C7 Gene

Genes around OR13C7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR13C7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR13C7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR13C7 Gene

Proteins for OR13C7 Gene

  • Protein details for OR13C7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0DN81-O13C7_HUMAN
    Recommended name:
    Olfactory receptor 13C7
    Protein Accession:
    P0DN81

    Protein attributes for OR13C7 Gene

    Size:
    318 amino acids
    Molecular mass:
    34899 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR13C7 Gene

Post-translational modifications for OR13C7 Gene

No Post-translational modifications

Other Protein References for OR13C7 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for OR13C7 Gene

Domains & Families for OR13C7 Gene

Gene Families for OR13C7 Gene

Protein Domains for OR13C7 Gene

Graphical View of Domain Structure for InterPro Entry

P0DN81

UniProtKB/Swiss-Prot:

O13C7_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR13C7: view

No data available for Suggested Antigen Peptide Sequences for OR13C7 Gene

Function for OR13C7 Gene

Molecular function for OR13C7 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR13C7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR13C7: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR13C7 Gene

Localization for OR13C7 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR13C7 Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR13C7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR13C7: view

No data available for Subcellular locations from COMPARTMENTS for OR13C7 Gene

Pathways & Interactions for OR13C7 Gene

SuperPathways for OR13C7 Gene

No Data Available

Interacting Proteins for OR13C7 Gene

Gene Ontology (GO) - Biological Process for OR13C7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR13C7: view

No data available for Pathways by source and SIGNOR curated interactions for OR13C7 Gene

Drugs & Compounds for OR13C7 Gene

No Compound Related Data Available

Transcripts for OR13C7 Gene

mRNA/cDNA for OR13C7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR13C7 Gene

No ASD Table

Relevant External Links for OR13C7 Gene

GeneLoc Exon Structure for
OR13C7
ECgene alternative splicing isoforms for
OR13C7

Expression for OR13C7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR13C7 Gene

NURSA nuclear receptor signaling pathways regulating expression of OR13C7 Gene:

OR13C7
genes like me logo Genes that share expression patterns with OR13C7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR13C7 Gene

Orthologs for OR13C7 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR13C7 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia -- 35
  • 48 (a)
OneToMany
-- 35
  • 46 (a)
OneToMany
cow
(Bos Taurus)
Mammalia OR13C7P 35
  • 47 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Or13c7b 55 Olfr156 35
  • 47 (a)
OneToMany
Or13c7 55 Olfr155
  • chr4:43,854,311-43,855,267
Or13c7c 55 Olfr157
  • chr4:43,835,535-43,836,488
Or13c7d 55 Olfr159
  • chr4:43,770,053-43,771,009
Or13c7e-ps 55 Olfr29-ps1
  • chr4:43,781,369-43,782,328
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 34 (a)
ManyToMany
Species where no ortholog for OR13C7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR13C7 Gene

ENSEMBL:
Gene Tree for OR13C7 (if available)
TreeFam:
Gene Tree for OR13C7 (if available)

Paralogs for OR13C7 Gene

genes like me logo Genes that share paralogs with OR13C7: view

Variants for OR13C7 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for OR13C7 Gene

O13C7_HUMAN-P0DN81
Segregating pseudogene, locus showing both intact and pseudogene forms in the population. A double nucleotide deletion at position Pro-144 in the gene coding for this protein is responsible for functional diversity, producing a pseudogene.

Relevant External Links for OR13C7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR13C7

No data available for Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR13C7 Gene

Disorders for OR13C7 Gene

No disorders were found for OR13C7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR13C7 Gene

Publications for OR13C7 Gene

  1. Personal receptor repertoires: olfaction as a model. (PMID: 22908908) Olender T. … Lancet D. (BMC Genomics 2012) 3 4 64
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4 64
  3. Organization and evolutionary relatedness of OR37 olfactory receptor genes in mouse and human. (PMID: 12906860) Hoppe R. … Strotmann J. (Genomics 2003) 3 64

Products for OR13C7 Gene

Sources for OR13C7 Gene

Content
Loading form....