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Aliases for OR13C6P Gene

Aliases for OR13C6P Gene

  • Olfactory Receptor Family 13 Subfamily C Member 6 Pseudogene 2 3 5
  • Olfactory Receptor, Family 13, Subfamily C, Member 6 Pseudogene 2 4
  • Olfactory Receptor, Family 13, Subfamily C, Member 7 Pseudogene 4
  • Putative Olfactory Receptor ENSP00000348552 3
  • Putative Olfactory Receptor 13C7 4
  • OR37B 3

External Ids for OR13C6P Gene

Previous GeneCards Identifiers for OR13C6P Gene

  • GC09U990183
  • GC09M035983

Summaries for OR13C6P Gene

Entrez Gene Summary for OR13C6P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR13C6P Gene

OR13C6P (Olfactory Receptor Family 13 Subfamily C Member 6 Pseudogene) is a Pseudogene. GO annotations related to this gene include G-protein coupled receptor activity.

UniProtKB/Swiss-Prot for OR13C6P Gene

  • Odorant receptor.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR13C6P Gene

Genomics for OR13C6P Gene

Regulatory Elements for OR13C6P Gene

Enhancers for OR13C6P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F035995 0.5 Ensembl ENCODE 10.7 -4.7 -4712 2.7 JUND TRIM24 SETDB1 OR13C6P OR2S1P HRCT1 OR13C7
GH09F036005 0.2 ENCODE 6.1 -14.3 -14255 1.1 HDAC1 PKNOX1 TBL1XR1 ZNF766 GATA2 ETV6 ZEB2 ELF1 KLF16 SMARCA4 OR13C6P OR13C7 OR2S1P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around OR13C6P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR13C6P Gene

Chromosome:
9
Start:
35,991,336 bp from pter
End:
35,992,285 bp from pter
Size:
950 bases
Orientation:
Minus strand

Genomic View for OR13C6P Gene

Genes around OR13C6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR13C6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR13C6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR13C6P Gene

Proteins for OR13C6P Gene

  • Protein details for OR13C6P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NH95-O13C6_HUMAN
    Recommended name:
    Putative olfactory receptor 13C6
    Protein Accession:
    Q8NH95

    Protein attributes for OR13C6P Gene

    Size:
    151 amino acids
    Molecular mass:
    16702 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05742.1; Type=Miscellaneous discrepancy; Note=Several sequencing errors.; Evidence={ECO:0000305};

neXtProt entry for OR13C6P Gene

Post-translational modifications for OR13C6P Gene

Other Protein References for OR13C6P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR13C6P Gene

Domains & Families for OR13C6P Gene

Gene Families for OR13C6P Gene

Protein Domains for OR13C6P Gene

Graphical View of Domain Structure for InterPro Entry

Q8NH95

UniProtKB/Swiss-Prot:

O13C6_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR13C6P: view

No data available for Suggested Antigen Peptide Sequences for OR13C6P Gene

Function for OR13C6P Gene

Molecular function for OR13C6P Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR13C6P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
genes like me logo Genes that share ontologies with OR13C6P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR13C6P Gene

Localization for OR13C6P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR13C6P Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR13C6P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR13C6P: view

No data available for Subcellular locations from COMPARTMENTS for OR13C6P Gene

Pathways & Interactions for OR13C6P Gene

SuperPathways for OR13C6P Gene

No Data Available

Interacting Proteins for OR13C6P Gene

Gene Ontology (GO) - Biological Process for OR13C6P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0007608 sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR13C6P: view

No data available for Pathways by source and SIGNOR curated interactions for OR13C6P Gene

Transcripts for OR13C6P Gene

mRNA/cDNA for OR13C6P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR13C6P Gene

No ASD Table

Relevant External Links for OR13C6P Gene

GeneLoc Exon Structure for
OR13C6P
ECgene alternative splicing isoforms for
OR13C6P

Expression for OR13C6P Gene

mRNA expression in normal human tissues for OR13C6P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR13C6P Gene:

OR13C6P
genes like me logo Genes that share expression patterns with OR13C6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OR13C6P Gene

Orthologs for OR13C6P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR13C6P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or13d31-ps 55 Olfr269-ps1
  • chr4:43,767,428-43,767,777
Species where no ortholog for OR13C6P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR13C6P Gene

ENSEMBL:
Gene Tree for OR13C6P (if available)
TreeFam:
Gene Tree for OR13C6P (if available)

Paralogs for OR13C6P Gene

No data available for Paralogs for OR13C6P Gene

Variants for OR13C6P Gene

Relevant External Links for OR13C6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR13C6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR13C6P Gene

Disorders for OR13C6P Gene

No disorders were found for OR13C6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR13C6P Gene

Publications for OR13C6P Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4 64
  2. Organization and evolutionary relatedness of OR37 olfactory receptor genes in mouse and human. (PMID: 12906860) Hoppe R. … Strotmann J. (Genomics 2003) 3 64

Products for OR13C6P Gene

Sources for OR13C6P Gene

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