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Aliases for OR12D1 Gene

Aliases for OR12D1 Gene

  • Olfactory Receptor Family 12 Subfamily D Member 1 (Gene/Pseudogene) 2 3 5
  • Olfactory Receptor, Family 12, Subfamily D, Member 1 Pseudogene 2 3
  • OR12D1P 3 4
  • Olfactory Receptor, Family 12, Subfamily D, Member 1 (Gene/Pseudogene) 2
  • Olfactory Receptor, Family 12, Subfamily D, Member 1 2
  • Olfactory Receptor 12D1 Pseudogene 4
  • Hs6M1-19 3

External Ids for OR12D1 Gene

Previous HGNC Symbols for OR12D1 Gene

  • OR12D1P

Previous GeneCards Identifiers for OR12D1 Gene

  • GC06P029492
  • GC06P029388

Summaries for OR12D1 Gene

Entrez Gene Summary for OR12D1 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR12D1 Gene

OR12D1 (Olfactory Receptor Family 12 Subfamily D Member 1 (Gene/Pseudogene)) is a Protein Coding gene. An important paralog of this gene is OR12D2.

UniProtKB/Swiss-Prot for OR12D1 Gene

  • Odorant receptor.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR12D1 Gene

Genomics for OR12D1 Gene

Genomic Location for OR12D1 Gene

Chromosome:
6
Start:
29,417,165 bp from pter
End:
29,418,296 bp from pter
Size:
1,132 bases
Orientation:
Plus strand

Genomic View for OR12D1 Gene

Genes around OR12D1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR12D1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR12D1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements for OR12D1 Gene

Proteins for OR12D1 Gene

  • Protein details for OR12D1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0DN82-O12D1_HUMAN
    Recommended name:
    Olfactory receptor 12D1
    Protein Accession:
    P0DN82

    Protein attributes for OR12D1 Gene

    Size:
    309 amino acids
    Molecular mass:
    35330 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR12D1 Gene

Proteomics data for OR12D1 Gene at MOPED

Post-translational modifications for OR12D1 Gene

No Post-translational modifications

Other Protein References for OR12D1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for OR12D1 Gene

Domains & Families for OR12D1 Gene

Gene Families for OR12D1 Gene

Protein Domains for OR12D1 Gene

Graphical View of Domain Structure for InterPro Entry

P0DN82

UniProtKB/Swiss-Prot:

O12D1_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR12D1: view

No data available for Suggested Antigen Peptide Sequences for OR12D1 Gene

Function for OR12D1 Gene

Molecular function for OR12D1 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR12D1 Gene

Localization for OR12D1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR12D1 Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR12D1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR12D1: view

No data available for Subcellular locations from COMPARTMENTS for OR12D1 Gene

Pathways & Interactions for OR12D1 Gene

SuperPathways for OR12D1 Gene

No Data Available

Interacting Proteins for OR12D1 Gene

Gene Ontology (GO) - Biological Process for OR12D1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
genes like me logo Genes that share ontologies with OR12D1: view

No data available for Pathways by source and SIGNOR curated interactions for OR12D1 Gene

Drugs & Compounds for OR12D1 Gene

No Compound Related Data Available

Transcripts for OR12D1 Gene

mRNA/cDNA for OR12D1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR12D1 Gene

No ASD Table

Relevant External Links for OR12D1 Gene

GeneLoc Exon Structure for
OR12D1
ECgene alternative splicing isoforms for
OR12D1

Expression for OR12D1 Gene

mRNA expression in normal human tissues for OR12D1 Gene

genes like me logo Genes that share expression patterns with OR12D1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for OR12D1 Gene

Orthologs for OR12D1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for OR12D1 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 57 (a)
OneToMany
-- 36
  • 54 (a)
OneToMany
-- 36
  • 58 (a)
OneToMany
-- 36
  • 57 (a)
OneToMany
-- 36
  • 57 (a)
OneToMany
-- 36
  • 54 (a)
OneToMany
-- 36
  • 57 (a)
OneToMany
-- 36
  • 57 (a)
OneToMany
OR12D2 36
  • 58 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 51 (a)
ManyToMany
-- 36
  • 51 (a)
ManyToMany
-- 36
  • 51 (a)
ManyToMany
-- 36
  • 50 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Olfr101 36
  • 54 (a)
OneToMany
Olfr102 36
  • 55 (a)
OneToMany
Olfr103 36
  • 53 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 48 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 36
  • 45 (a)
OneToMany
Species with no ortholog for OR12D1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR12D1 Gene

ENSEMBL:
Gene Tree for OR12D1 (if available)
TreeFam:
Gene Tree for OR12D1 (if available)

Paralogs for OR12D1 Gene

Paralogs for OR12D1 Gene

genes like me logo Genes that share paralogs with OR12D1: view

Variants for OR12D1 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for OR12D1 Gene

O12D1_HUMAN-P0DN82
Segregating pseudogene, locus showing both intact and pseudogene forms in the population. A deletion of 16 nucleotides at position Ser-186 in the gene coding for this protein is responsible for functional diversity, producing a pseudogene.

No data available for Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for OR12D1 Gene

Disorders for OR12D1 Gene

No disorders were found for OR12D1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR12D1 Gene

Publications for OR12D1 Gene

  1. Personal receptor repertoires: olfaction as a model. (PMID: 22908908) Olender T. … Lancet D. (BMC Genomics 2012) 4 67

Products for OR12D1 Gene

Sources for OR12D1 Gene

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