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Aliases for OR10H2 Gene

Aliases for OR10H2 Gene

  • Olfactory Receptor Family 10 Subfamily H Member 2 2 3 5
  • Olfactory Receptor, Family 10, Subfamily H, Member 2 2
  • Olfactory Receptor OR19-23 4

External Ids for OR10H2 Gene

Previous GeneCards Identifiers for OR10H2 Gene

  • GC19M016330
  • GC19P016232
  • GC19P015684
  • GC19P015699
  • GC19P015838

Summaries for OR10H2 Gene

Entrez Gene Summary for OR10H2 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR10H2 Gene

OR10H2 (Olfactory Receptor Family 10 Subfamily H Member 2) is a Protein Coding gene. Among its related pathways are Peptide ligand-binding receptors and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR10H5.

UniProtKB/Swiss-Prot for OR10H2 Gene

  • Odorant receptor.

Gene Wiki entry for OR10H2 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR10H2 Gene

Genomics for OR10H2 Gene

Regulatory Elements for OR10H2 Gene

Enhancers for OR10H2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G015826 2 FANTOM5 Ensembl ENCODE dbSUPER 8.1 +104.7 104745 12.9 HDGF PKNOX1 CREB3L1 ARNT AGO1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ENSG00000269578 AKAP8 CYP4F24P UCA1 OR10H4 OR10H5 ENSG00000268087 CYP4F12 CYP4F11 ENSG00000267904
GH19G016168 1.7 FANTOM5 Ensembl ENCODE dbSUPER 9.3 +440.9 440941 1.6 FOXA2 SIN3A FOS DEK NFYC TSHZ1 MAFF GLIS1 KDM1A WT1 SIN3B ENSG00000268743 OR10H3 ENSG00000269044 OR10H2 AP1M1 OR10H4 CIB3 ENSG00000269243
GH19G015701 1.1 Ensembl ENCODE 12.1 -25.5 -25475 2.0 NFIB ARID4B YBX1 RAD21 YY1 ZNF366 DEK CEBPB REST NR2F2 CYP4F12 OR10H2 CYP4F24P OR10H5 GC19M015702
GH19G016063 1.9 FANTOM5 ENCODE dbSUPER 2.6 +344.9 344894 18.7 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 MCM3 AKAP8 ENSG00000269578 SMIM7 ENSG00000267904 ENSG00000268087 C19orf44 CYP4F24P ENSG00000268743 SIN3B ENSG00000269427
GH19G015820 0.3 FANTOM5 7 +92.9 92945 0.1 OR10H4 OR10H5 CYP4F11 OR10H3 OR10H2 AKAP8 RASAL3 ZNF861P OR10H1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR10H2 on UCSC Golden Path with GeneCards custom track

Genomic Location for OR10H2 Gene

Chromosome:
19
Start:
15,728,020 bp from pter
End:
15,729,060 bp from pter
Size:
1,041 bases
Orientation:
Plus strand

Genomic View for OR10H2 Gene

Genes around OR10H2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR10H2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR10H2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR10H2 Gene

Proteins for OR10H2 Gene

  • Protein details for OR10H2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O60403-O10H2_HUMAN
    Recommended name:
    Olfactory receptor 10H2
    Protein Accession:
    O60403
    Secondary Accessions:
    • Q6IFQ1
    • Q96R58

    Protein attributes for OR10H2 Gene

    Size:
    315 amino acids
    Molecular mass:
    34663 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR10H2 Gene

Post-translational modifications for OR10H2 Gene

No Post-translational modifications

Other Protein References for OR10H2 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR10H2 Gene

Domains & Families for OR10H2 Gene

Gene Families for OR10H2 Gene

Protein Domains for OR10H2 Gene

Suggested Antigen Peptide Sequences for OR10H2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

O60403

UniProtKB/Swiss-Prot:

O10H2_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR10H2: view

Function for OR10H2 Gene

Molecular function for OR10H2 Gene

GENATLAS Biochemistry:
olfactory receptor,family 10,subfamily H,member 2,G protein coupled receptor superfamily
UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR10H2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
GO:0004993 G-protein coupled serotonin receptor activity IBA --
GO:0030594 neurotransmitter receptor activity IBA --
genes like me logo Genes that share ontologies with OR10H2: view
genes like me logo Genes that share phenotypes with OR10H2: view

Animal Model Products

CRISPR Products

miRNA for OR10H2 Gene

miRTarBase miRNAs that target OR10H2

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for OR10H2 Gene

Localization for OR10H2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR10H2 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR10H2 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR10H2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR10H2: view

Pathways & Interactions for OR10H2 Gene

genes like me logo Genes that share pathways with OR10H2: view

Pathways by source for OR10H2 Gene

1 BioSystems pathway for OR10H2 Gene
1 KEGG pathway for OR10H2 Gene

Interacting Proteins for OR10H2 Gene

STRING Interaction Network Preview (showing 5 interactants - click image to see 12)
http://version10.5.string-db.org/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000306095%0d%0a9606.ENSP00000334051%0d%0a9606.ENSP00000367869%0d%0a9606.ENSP00000248572%0d%0a9606.ENSP00000317578%0d%0a9606.ENSP00000366488%0d%0a
Selected Interacting proteins: O60403-O10H2_HUMAN ENSP00000306095 for OR10H2 Gene via IID STRING

Gene Ontology (GO) - Biological Process for OR10H2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0007608 sensory perception of smell IEA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR10H2: view

No data available for SIGNOR curated interactions for OR10H2 Gene

Drugs & Compounds for OR10H2 Gene

No Compound Related Data Available

Transcripts for OR10H2 Gene

mRNA/cDNA for OR10H2 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OR10H2 Gene

Olfactory receptor, family 10, subfamily H, member 2:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR10H2 Gene

No ASD Table

Relevant External Links for OR10H2 Gene

GeneLoc Exon Structure for
OR10H2
ECgene alternative splicing isoforms for
OR10H2

Expression for OR10H2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR10H2 Gene

NURSA nuclear receptor signaling pathways regulating expression of OR10H2 Gene:

OR10H2

SOURCE GeneReport for Unigene cluster for OR10H2 Gene:

Hs.247694
genes like me logo Genes that share expression patterns with OR10H2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR10H2 Gene

Orthologs for OR10H2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR10H2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC468755 34
  • 98.31 (n)
OR10H2 35
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia LOC532441 34
  • 85.78 (n)
-- 35
  • 83 (a)
ManyToMany
-- 35
  • 83 (a)
ManyToMany
OR10H1 35
  • 83 (a)
ManyToMany
-- 35
  • 81 (a)
ManyToMany
-- 35
  • 81 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 84 (a)
ManyToMany
-- 35
  • 83 (a)
ManyToMany
-- 35
  • 80 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Olfr239 35
  • 84 (a)
ManyToMany
Olfr55 35
  • 83 (a)
ManyToMany
Gm4461 35
  • 81 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Olr1091 34
  • 82.73 (n)
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 74 (a)
ManyToMany
-- 35
  • 73 (a)
ManyToMany
-- 35
  • 70 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 68 (a)
OneToMany
Species where no ortholog for OR10H2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR10H2 Gene

ENSEMBL:
Gene Tree for OR10H2 (if available)
TreeFam:
Gene Tree for OR10H2 (if available)

Paralogs for OR10H2 Gene

(448) SIMAP similar genes for OR10H2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR10H2: view

Variants for OR10H2 Gene

Sequence variations from dbSNP and Humsavar for OR10H2 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1002258663 -- 15,727,717(+) GAACA(A/G)AGGCA upstream-variant-2KB
rs1002311012 -- 15,727,946(+) GGAGG(C/T)GCTCT upstream-variant-2KB
rs1003930335 -- 15,727,026(+) GGTCA(A/G)AGATG upstream-variant-2KB
rs1004157536 -- 15,726,488(+) GTCAC(A/G)TAGTG upstream-variant-2KB
rs1004282360 -- 15,726,746(+) CGGAG(A/G)CAGGA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR10H2 Gene

Variant ID Type Subtype PubMed ID
dgv137e55 CNV gain 17911159
dgv3454n100 CNV gain 25217958
esv2758747 CNV gain+loss 17122850
esv3260 OTHER inversion 18987735
esv3334671 CNV duplication 20981092
nsv1061046 CNV gain 25217958
nsv1064684 CNV gain 25217958
nsv1079032 OTHER inversion 25765185
nsv1133007 OTHER inversion 24896259
nsv1141884 OTHER inversion 24896259
nsv1153107 OTHER inversion 26484159
nsv470128 CNV gain 18288195
nsv526168 CNV gain 19592680

Variation tolerance for OR10H2 Gene

Residual Variation Intolerance Score: 57.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 13.41; 95.44% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for OR10H2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR10H2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR10H2 Gene

Disorders for OR10H2 Gene

Relevant External Links for OR10H2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR10H2

No disorders were found for OR10H2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR10H2 Gene

Publications for OR10H2 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4 64
  2. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3 4 64
  5. Exome sequencing reveals new causal mutations in children with epileptic encephalopathies. (PMID: 23647072) Veeramah K.R. … Hammer M.F. (Epilepsia 2013) 4 64

Products for OR10H2 Gene

Sources for OR10H2 Gene

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