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Aliases for OR10D4P Gene

Aliases for OR10D4P Gene

  • Olfactory Receptor Family 10 Subfamily D Member 4 Pseudogene 2 3 5
  • OR10D4 3 4
  • Olfactory Receptor, Family 10, Subfamily D, Member 4 Pseudogene 2
  • Olfactory Receptor, Family 10, Subfamily D, Member 6 Pseudogene 3
  • Seven Transmembrane Helix Receptor 3
  • Olfactory Receptor 10D4 3
  • OR10D6P 3

External Ids for OR10D4P Gene

Previous HGNC Symbols for OR10D4P Gene

  • OR10D4
  • OR10D6P

Previous GeneCards Identifiers for OR10D4P Gene

  • GC11M123503
  • GC11M123469
  • GC11M123964

Summaries for OR10D4P Gene

Entrez Gene Summary for OR10D4P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR10D4P Gene

OR10D4P (Olfactory Receptor Family 10 Subfamily D Member 4 Pseudogene) is a Pseudogene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity.

UniProtKB/Swiss-Prot for OR10D4P Gene

  • Odorant receptor.

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR10D4P Gene

Genomics for OR10D4P Gene

Regulatory Elements for OR10D4P Gene

Enhancers for OR10D4P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G124086 0.5 FANTOM5 0.4 +8.0 7992 0.2 MXI1 RFX1 EP300 VWA5A TMEM225 SCN3B OR6M1 OR8D1 LOC105369545 OR10D4P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR10D4P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR10D4P Gene

Chromosome:
11
Start:
124,093,436 bp from pter
End:
124,094,732 bp from pter
Size:
1,297 bases
Orientation:
Minus strand

Genomic View for OR10D4P Gene

Genes around OR10D4P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR10D4P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR10D4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR10D4P Gene

Proteins for OR10D4P Gene

  • Protein details for OR10D4P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGN7-O10D4_HUMAN
    Recommended name:
    Putative olfactory receptor 10D4
    Protein Accession:
    Q8NGN7

    Protein attributes for OR10D4P Gene

    Size:
    298 amino acids
    Molecular mass:
    33107 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR10D4P Gene

Post-translational modifications for OR10D4P Gene

Other Protein References for OR10D4P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR10D4P Gene

Domains & Families for OR10D4P Gene

Gene Families for OR10D4P Gene

Protein Domains for OR10D4P Gene

Suggested Antigen Peptide Sequences for OR10D4P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NGN7

UniProtKB/Swiss-Prot:

O10D4_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR10D4P: view

Function for OR10D4P Gene

Molecular function for OR10D4P Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR10D4P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA --
genes like me logo Genes that share ontologies with OR10D4P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR10D4P Gene

Localization for OR10D4P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR10D4P Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR10D4P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with OR10D4P: view

No data available for Subcellular locations from COMPARTMENTS for OR10D4P Gene

Pathways & Interactions for OR10D4P Gene

genes like me logo Genes that share pathways with OR10D4P: view

Pathways by source for OR10D4P Gene

Interacting Proteins for OR10D4P Gene

Gene Ontology (GO) - Biological Process for OR10D4P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IBA --
GO:0007608 sensory perception of smell IBA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR10D4P: view

No data available for SIGNOR curated interactions for OR10D4P Gene

Drugs & Compounds for OR10D4P Gene

No Compound Related Data Available

Transcripts for OR10D4P Gene

mRNA/cDNA for OR10D4P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR10D4P Gene

No ASD Table

Relevant External Links for OR10D4P Gene

GeneLoc Exon Structure for
OR10D4P
ECgene alternative splicing isoforms for
OR10D4P

Expression for OR10D4P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR10D4P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR10D4P Gene:

OR10D4P
genes like me logo Genes that share expression patterns with OR10D4P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR10D4P Gene

Orthologs for OR10D4P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR10D4P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or10d4 55 Olfr963
  • chr9:39,669,059-39,669,991
Or10d4b 55 Olfr960
  • chr9:39,623,077-39,624,072
Or10d4c 55 Olfr961
  • chr9:39,646,728-39,647,669
Species where no ortholog for OR10D4P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR10D4P Gene

ENSEMBL:
Gene Tree for OR10D4P (if available)
TreeFam:
Gene Tree for OR10D4P (if available)

Paralogs for OR10D4P Gene

(451) SIMAP similar genes for OR10D4P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR10D4P: view

No data available for Paralogs for OR10D4P Gene

Variants for OR10D4P Gene

Relevant External Links for OR10D4P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR10D4P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR10D4P Gene

Disorders for OR10D4P Gene

No disorders were found for OR10D4P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR10D4P Gene

Publications for OR10D4P Gene

No publications were found for OR10D4P Gene.

Products for OR10D4P Gene

Sources for OR10D4P Gene

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