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Aliases for OPCML-IT2 Gene

Subcategory (RNA class) for OPCML-IT2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for OPCML-IT2 Gene

  • OPCML Intronic Transcript 2 2 3 5
  • OPCML Intronic Transcript 2 (Non-Protein Coding) 2

External Ids for OPCML-IT2 Gene

Previous GeneCards Identifiers for OPCML-IT2 Gene

  • GC00U933473
  • GC11M132730

Summaries for OPCML-IT2 Gene

GeneCards Summary for OPCML-IT2 Gene

OPCML-IT2 (OPCML Intronic Transcript 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OPCML-IT2 Gene

Genomics for OPCML-IT2 Gene

Regulatory Elements for OPCML-IT2 Gene

Enhancers for OPCML-IT2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F132858 0.2 Ensembl 0.8 +1.6 1577 0.2 CTCF SMARCA4 SMC3 OPCML-IT2 GC11P132851
GH11F132866 0.5 ENCODE 0.4 -6.9 -6904 0.2 OPCML-IT2 GC11P132899
GH11F132874 1 Ensembl ENCODE 0.4 -14.8 -14760 0.6 BHLHE40 FOS OPCML-IT2 GC11P132899
GH11F132875 0.3 FANTOM5 0.3 -15.3 -15253 0.2 OPCML OPCML-IT2 GC11P132899
GH11F132886 1.1 Ensembl ENCODE 0.3 -26.7 -26684 1.3 ZNF146 GC11P132899 OPCML-IT2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around OPCML-IT2 on UCSC Golden Path with GeneCards custom track

Genomic Location for OPCML-IT2 Gene

132,859,245 bp from pter
132,860,077 bp from pter
833 bases
Minus strand

Genomic View for OPCML-IT2 Gene

Genes around OPCML-IT2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OPCML-IT2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OPCML-IT2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for OPCML-IT2 Gene

Proteins for OPCML-IT2 Gene

Post-translational modifications for OPCML-IT2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OPCML-IT2 Gene

Domains & Families for OPCML-IT2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OPCML-IT2 Gene

Function for OPCML-IT2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OPCML-IT2 Gene

Localization for OPCML-IT2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OPCML-IT2 Gene

Pathways & Interactions for OPCML-IT2 Gene

SuperPathways for OPCML-IT2 Gene

No Data Available

Interacting Proteins for OPCML-IT2 Gene

Gene Ontology (GO) - Biological Process for OPCML-IT2 Gene


No data available for Pathways by source and SIGNOR curated interactions for OPCML-IT2 Gene

Transcripts for OPCML-IT2 Gene

mRNA/cDNA for OPCML-IT2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OPCML-IT2 Gene

No ASD Table

Relevant External Links for OPCML-IT2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for OPCML-IT2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OPCML-IT2 Gene

genes like me logo Genes that share expression patterns with OPCML-IT2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OPCML-IT2 Gene

Orthologs for OPCML-IT2 Gene

Evolution for OPCML-IT2 Gene

Gene Tree for OPCML-IT2 (if available)
Gene Tree for OPCML-IT2 (if available)

No data available for Orthologs for OPCML-IT2 Gene

Paralogs for OPCML-IT2 Gene

No data available for Paralogs for OPCML-IT2 Gene

Variants for OPCML-IT2 Gene

Relevant External Links for OPCML-IT2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OPCML-IT2 Gene

Disorders for OPCML-IT2 Gene

No disorders were found for OPCML-IT2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OPCML-IT2 Gene

Publications for OPCML-IT2 Gene

No publications were found for OPCML-IT2 Gene.

Products for OPCML-IT2 Gene

Sources for OPCML-IT2 Gene

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