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Aliases for OOSP1 Gene

Aliases for OOSP1 Gene

  • Oocyte Secreted Protein 1, Pseudogene 2 3
  • Oocyte Secreted Protein 1 2

External Ids for OOSP1 Gene

Previous GeneCards Identifiers for OOSP1 Gene

  • GC11U901218
  • GC11P059705

Summaries for OOSP1 Gene

GeneCards Summary for OOSP1 Gene

OOSP1 (Oocyte Secreted Protein 1, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for OOSP1 Gene

  • May be involved in cell differentiation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OOSP1 Gene

Genomics for OOSP1 Gene

Genomic Location for OOSP1 Gene

Start:
59,938,455 bp from pter
End:
59,995,845 bp from pter
Size:
57,391 bases
Orientation:
Plus strand

Genomic View for OOSP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OOSP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OOSP1 Gene

No data available for Regulatory Elements for OOSP1 Gene

Proteins for OOSP1 Gene

  • Protein details for OOSP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MZH6-OOSP1_HUMAN
    Recommended name:
    Putative oocyte-secreted protein 1 homolog
    Protein Accession:
    A8MZH6
    Secondary Accessions:

    Protein attributes for OOSP1 Gene

    Size:
    123 amino acids
    Molecular mass:
    14433 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OOSP1 Gene

Proteomics data for OOSP1 Gene at MOPED

Post-translational modifications for OOSP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OOSP1 Gene

Domains for OOSP1 Gene

Protein Domains for OOSP1 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for OOSP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A8MZH6

UniProtKB/Swiss-Prot:

OOSP1_HUMAN :
  • A8MZH6
Family:
  • Belongs to the PLAC1 family.
genes like me logo Genes that share domains with OOSP1: view

No data available for Gene Families for OOSP1 Gene

Function for OOSP1 Gene

Molecular function for OOSP1 Gene

UniProtKB/Swiss-Prot Function: May be involved in cell differentiation.

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OOSP1 Gene

Localization for OOSP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OOSP1 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OOSP1 Gene COMPARTMENTS Subcellular localization image for OOSP1 gene
Compartment Confidence
extracellular 3
cytosol 2
nucleus 2

Gene Ontology (GO) - Cellular Components for OOSP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with OOSP1: view

Pathways for OOSP1 Gene

SuperPathways for OOSP1 Gene

No Data Available

Interacting Proteins for OOSP1 Gene

Gene Ontology (GO) - Biological Process for OOSP1 Gene

None

No data available for Pathways by source for OOSP1 Gene

Transcripts for OOSP1 Gene

mRNA/cDNA for OOSP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for OOSP1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for OOSP1 Gene

No ASD Table

Relevant External Links for OOSP1 Gene

GeneLoc Exon Structure for
OOSP1
ECgene alternative splicing isoforms for
OOSP1

Expression for OOSP1 Gene

mRNA expression in normal human tissues for OOSP1 Gene

SOURCE GeneReport for Unigene cluster for OOSP1 Gene Hs.722773

genes like me logo Genes that share expressions with OOSP1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for OOSP1 Gene

Orthologs for OOSP1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OOSP1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia OOSP1 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia OOSP1 36
  • 44 (a)
OneToOne
dog
(Canis familiaris)
Mammalia OOSP1 36
  • 45 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Oosp1 36
  • 30 (a)
OneToOne
Species with no ortholog for OOSP1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OOSP1 Gene

ENSEMBL:
Gene Tree for OOSP1 (if available)
TreeFam:
Gene Tree for OOSP1 (if available)

Paralogs for OOSP1 Gene

Pseudogenes.org Pseudogenes for OOSP1 Gene

genes like me logo Genes that share paralogs with OOSP1: view

No data available for Paralogs for OOSP1 Gene

Variants for OOSP1 Gene

Sequence variations from dbSNP and Humsavar for OOSP1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs479908 -- 59,991,830(-) ttata(A/C)aaaaa intron-variant
rs493458 -- 59,994,114(-) ATAGC(C/G)TTGGG intron-variant
rs494374 -- 59,987,458(-) ctaaa(C/T)gttca intron-variant
rs494423 -- 59,987,436(-) gagtt(A/G)catat intron-variant
rs494640 -- 59,966,365(+) TTGGC(A/C)AGTAC intron-variant

Relevant External Links for OOSP1 Gene

HapMap Linkage Disequilibrium report
OOSP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for OOSP1 Gene

Disorders for OOSP1 Gene

No disorders were found for OOSP1 Gene.

No data available for UniProtKB/Swiss-Prot for OOSP1 Gene

Publications for OOSP1 Gene

  1. Oosp1 encodes a novel mouse oocyte-secreted protein. (PMID: 11747200) Yan C. … Matzuk M.M. (Genesis 2001) 2 3
  2. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 3 4

Products for OOSP1 Gene

Sources for OOSP1 Gene

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