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Aliases for OOEP-AS1 Gene

Subcategory (RNA class) for OOEP-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OOEP-AS1 Gene

  • OOEP Antisense RNA 1 2 3 5
  • OOEP Antisense RNA 1 (Non-Protein Coding) 2 3
  • OOEP Antisense RNA (Non-Protein Coding) 2 3
  • OOEP-AS 3

External Ids for OOEP-AS1 Gene

Previous HGNC Symbols for OOEP-AS1 Gene

  • OOEP-AS

Previous GeneCards Identifiers for OOEP-AS1 Gene

  • GC00U931570
  • GC06P074082

Summaries for OOEP-AS1 Gene

GeneCards Summary for OOEP-AS1 Gene

OOEP-AS1 (OOEP Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OOEP-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OOEP-AS1 Gene

Genomics for OOEP-AS1 Gene

GeneHancer (GH) Regulatory Elements for OOEP-AS1 Gene

Promoters and enhancers for OOEP-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I073369 Promoter 0.6 EPDnew 550.8 +0.2 167 0.1 ZBTB33 OOEP-AS1 OOEP RPL39P3
GH06I073421 Enhancer 1 Ensembl ENCODE 11.3 +52.7 52733 2 HDAC1 PKNOX1 ATF1 NFRKB TCF12 ZNF766 ATF7 RUNX3 CREM ZBTB11 DDX43 OOEP RPS6P8 RPL39P3 OOEP-AS1 CGAS
GH06I073348 Enhancer 0.5 ENCODE 11.3 -20.4 -20366 2.2 SP1 POU5F1 ETS1 EZH2 OOEP-AS1 RPL39P3 OOEP KHDC1 RPS6P8 DDX43 MTO1 SLC17A5 DPPA5 PAICSP3
GH06I073362 Promoter 0.5 EPDnew 0.4 -7.1 -7065 0.1 KHDC3L OOEP-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OOEP-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OOEP-AS1 Gene

Genomic Locations for OOEP-AS1 Gene
chr6:73,369,704-73,387,717
(GRCh38/hg38)
Size:
18,014 bases
Orientation:
Plus strand
chr6:74,079,427-74,097,440
(GRCh37/hg19)

Genomic View for OOEP-AS1 Gene

Genes around OOEP-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OOEP-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OOEP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OOEP-AS1 Gene

Proteins for OOEP-AS1 Gene

Post-translational modifications for OOEP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OOEP-AS1 Gene

Domains & Families for OOEP-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OOEP-AS1 Gene

Function for OOEP-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OOEP-AS1 Gene

Localization for OOEP-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OOEP-AS1 Gene

Pathways & Interactions for OOEP-AS1 Gene

SuperPathways for OOEP-AS1 Gene

No Data Available

Interacting Proteins for OOEP-AS1 Gene

Gene Ontology (GO) - Biological Process for OOEP-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OOEP-AS1 Gene

Drugs & Compounds for OOEP-AS1 Gene

No Compound Related Data Available

Transcripts for OOEP-AS1 Gene

mRNA/cDNA for OOEP-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OOEP-AS1 Gene

No ASD Table

Relevant External Links for OOEP-AS1 Gene

GeneLoc Exon Structure for
OOEP-AS1
ECgene alternative splicing isoforms for
OOEP-AS1

Expression for OOEP-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OOEP-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OOEP-AS1 Gene

This gene is overexpressed in Testis (x33.1).
genes like me logo Genes that share expression patterns with OOEP-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OOEP-AS1 Gene

Orthologs for OOEP-AS1 Gene

Evolution for OOEP-AS1 Gene

ENSEMBL:
Gene Tree for OOEP-AS1 (if available)
TreeFam:
Gene Tree for OOEP-AS1 (if available)

No data available for Orthologs for OOEP-AS1 Gene

Paralogs for OOEP-AS1 Gene

No data available for Paralogs for OOEP-AS1 Gene

Variants for OOEP-AS1 Gene

Sequence variations from dbSNP and Humsavar for OOEP-AS1 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000051653 -- 73,376,625(+) A/G intron_variant
rs1000064520 -- 73,375,061(+) A/G intron_variant
rs1000110584 -- 73,384,508(+) G/A intron_variant
rs1000230221 -- 73,384,141(+) C/A intron_variant
rs1000338324 -- 73,369,521(+) AAA/A upstream_transcript_variant

Additional Variant Information for OOEP-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OOEP-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OOEP-AS1 Gene

Disorders for OOEP-AS1 Gene

No disorders were found for OOEP-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OOEP-AS1 Gene

Publications for OOEP-AS1 Gene

No publications were found for OOEP-AS1 Gene.

Products for OOEP-AS1 Gene

Sources for OOEP-AS1 Gene

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