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Aliases & Descriptions for OGT
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.4.1.- 3 FLJ23071 1 , 2 HRNT1 1 , 2 MGC22921 1 , 2 O-GLCNAC 1 , 2 OTTHUMP00000032154 2 OTTHUMP00000032166 2
Descriptions O-GlcNAc transferase p110 subunit 2 O-GlcNAc transferase subunit p110 3 O-linked GlcNAc transferase 2 O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 2 O-linked N-acetylglucosamine transferase 110 kDa subunit 3 uridinediphospho-N-acetylglucosamine:polypeptide beta-N-acetylglucosaminyl transferase 2
Search outside databases for aliases for OGT genePrevious GC identifers: GC0XP066927 GC0XP068231 GC0XP068986 GC0XP069619 GC0XP070535
Summaries for OGT (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for OGT : O-linked N-acetylglucosamine (O-GlcNAc) transferase (OGT) catalyzes the addition of a singleN-acetylglucosamine in O-glycosidic linkage to serine or threonine residues. Since bothphosphorylation and glycosylation compete for similar serine or threonine residues, the twoprocesses may compete for sites, or they may alter the substrate specificity of nearby sites bysteric or electrostatic effects. The protein contains nine tetratricopeptide repeats and aputative bipartite nuclear localization signal. Two alternatively spliced transcript variantsencoding distinct isoforms have been found for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: OGT1_HUMAN, O15294 Function : Addition of nucleotide-activated sugars directly onto the polypeptide throughO-glycosidic linkage with the hydroxyl of serine or threonine
Gene Wiki entry for OGT
Genomic Location for OGT
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the OGT gene Entrez Gene cytogenetic band: Xq13 Ensembl cytogenetic band: Xq13.1 HGNC cytogenetic band: Xq13 OGT Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome X GeneLoc Exon Structure
GeneLoc location for GC0XP070669:
(about GC identifiers )
Start:
70,669,658 bp from pter
End:
70,712,465 bp from pter
Size:
42,808 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000023.9 NT_011669.16 Proteins for OGT
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: OGT1_HUMAN, O15294 (See
protein sequence )Recommended Name: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit Size : 1046 amino acids; 116925 Da
Subunit : Heterotrimer of two 110 kDa and one 70 kDa subunits. It is not known if the 70 kDa subunitis encoded by a separate gene or is the product of either of a proteolytic degradation or analternative initiation of the 110 kDa subunit (By similarity). Interacts with HCFC1
Subcellular location : Cytoplasm (Potential). Nucleus (Potential)
PDB structures from and Proteopedia : 1W3B (3D)
 
Secondary accessions : Q7Z3K0 Q8WWM8 Q96CC1 Q9UG57Alternative splicing : 3 isoforms : O15294-1 O15294-2 O15294-3
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_858058.1 NP_858059.1 ENSEMBL proteins: ENSP00000362824 ENSP00000362805 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for OGT: Assays for OGT:
Protein
Domains/ Families for OGT(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O15294 ProtoNet protein and cluster: O15294
UniProtKB/Swiss-Prot: OGT1_HUMAN, O15294 Similarity : Belongs to the O-GlcNAc transferase familySimilarity : Contains 13 TPR repeats
Gene Function for OGT
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_003605 Applied Biosystems Silencer ® siRNAs for OGT Sigma-Aldrich siRNA for OGT Sigma-Aldrich shRNA for OGT Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_181672                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_181672                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_003605  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_181672 UniProtKB/Swiss-Prot: OGT1_HUMAN, O15294 Function : Addition of nucleotide-activated sugars directly onto the polypeptide throughO-glycosidic linkage with the hydroxyl of serine or threonine Catalytic activity : UDP-N-acetyl-D-glucosamine + peptide = UDP +N-acetyl-beta-D-glucosaminyl-peptide Enzyme Number (IUBMB): EC 2.4.1.-
Genatlas biochemistry entry for OGT :O-linked N-acetylglucosamine (GlcNAc) transferase,putative part of a glucose-responsive pathwayimplicated in the pathogenesis of diabetes mellitus
9 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Ogt) :3 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for OGT
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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UniProtKB/Swiss-Prot: OGT1_HUMAN, O15294 Pathway : Protein modification; protein glycosylation
Gene Network CentralTM Interacting Genes and Proteins Network for OGT 5/56 Interacting proteins for OGT (O15294 1 , 2 ENSP00000362824 3 ) via UniProtKB, MINT, and/or STRING (see all 56
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
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Drugs & Compounds for OGT (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for OGT 6 Novoseek chemical compound relationships for OGT gene
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
n-acetylglucosamine
84.48
12
12504895 (1), 16382487 (1), 11554736 (1), 14749383 (1) (see all 12 )
udp-n-acetylglucosamine
68.35
2
15305040 (1), 12373287 (1)
threonine
52.18
5
16382487 (1), 14749383 (1), 12373287 (1), 18519567 (1) (see all 5 )
alloxan
49.34
2
12373287 (1)
tyrosine
16.99
12
18519567 (2), 19238206 (2), 9083067 (1), 15147958 (1)
glucose
14.36
14
18353774 (5), 18174169 (3), 12373287 (1), 18323454 (1)
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Transcripts for OGT(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_003605 Sigma-Aldrich siRNA for OGT Sigma-Aldrich shRNA for OGT Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_181672 NM_181673
REFSEQ mRNAs for OGT gene (2 alternative transcripts): NM_181672.1 NM_181673.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_181672 NM_181673
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_181672                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_181672                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_003605  
Additional cDNA sequence: AF070560.1 AF147394.1 AF223393.1 AK300267.1 AK313530.1 AL049950.1 AL050366.1 AL833085.2 BC014434.1 BC015144.1 BC038180.1 BX537844.1 U77413.1
24/27 DOTS entries (see all 27
): DT.91967229 DT.99931287 DT.100822668 DT.95252610 DT.452005 DT.100822669 DT.101958541 DT.121302034 DT.95252653 DT.95252613 DT.40288601 DT.102833715 DT.102833716 DT.121302019 DT.95252611 DT.95252639 DT.95252651 DT.95363744 DT.100665946 DT.100729590 DT.100748147 DT.121301968 DT.121301976 DT.40288541
24/422 AceView cDNA sequences (see all 422
):AI708921 BP360404 AI671772 AI510713 AI886433 BU161128 AA331819 AW591624 CA414573 BE698198 AW873135 AA808426 AI660100 AL050366 AW948847 AA890003 AI589843 CA390300 AW204026 AI332788 CB162206 CN482977 BQ316752 BE350289
highest scoring ESTs for OGT :AL050366 U77413 AA057494 AA058478 AA187860 AA253130 AA258557 AA258718 AA278681 AA353062
Unigene Cluster for OGT: O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) Hs.405410 [show with all ESTs ] Unigene Representative Sequence: AL050366 GeneLoc Exon Structure 5/13 Alternative Splicing Database (ASD) splice patterns (SP) for OGT (see all 13
) ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d ^ 7a · 7b · 7c ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ SP1 :         -       -   -         -   -   -   -                       SP2 :         -   -     -   -         -   -   -   -                       SP3 :                                                     SP4 :                                     -                 SP5 :         -   -   -   -   -   -   -   -   -   -   -   -   -     -                
ExUns: 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21a · 21b · 21c ^ 22a · 22b ^ 23 ^ 24a · 24b · 24c ^ 25 ^ 26 SP1 :               -     -               SP2 :               -     -               SP3 :               -     -               SP4 :               -     -               SP5 :                                
About this scheme ECgene alternative splicing isoforms for OGT 2 Ensembl transcripts including schematic representations : ENST00000373719
ENST00000373701
Expression for OGT
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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OGT expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for OGT 1 / 2 / 3
13 probe-sets matching OGT gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTTGCAGATASOURCE GeneReport for Unigene cluster: Hs.405410 Expression variation in blood from EXPOLDB for OGT
UniProtKB/Swiss-Prot: OGT1_HUMAN, O15294 Tissue specificity : Highly expressed in pancreas and to a lesser extent in skeletal muscle, heart,brain and placenta. Present in trace amounts in lung and liver
Orthologs for OGT
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for OGT gene from 5/16 species (see all 16
)
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
dog (Canis familiaris)
OGT1
--
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl more
95.25(n) 99.71(a)
480955 XM_853825.1 XP_858918.1
cow (Bos taurus)
OGT1
--
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl more
94.62(n) 99.78(a)
532053 XM_610562.3 XP_610562.3
rat (Rattus norvegicus)
Ogt1
--
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl more
92.21(n) 99.42(a)
26295 NM_017107.1 NP_058803.1
mouse (Mus musculus)
Ogt1 , 5
X5
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl more 1, 5
92.45(n) 1 99.62(a) 1
108155 1 NM_139144.2 1 NP_631883.2 1 AF363030 5 AF539527 5 (see all 27 )
chicken (Gallus gallus)
OGT1
--
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl more
83.99(n) 97.58(a)
422203 XM_001232518.1 XP_001232519.1
About this table Species with no ortholog for OGT ENSEMBL Gene Tree for OGT Paralogs for OGT (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for OGT gene TMTC4 2
SNPs/Variants for OGT (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for OGT (up to first 250kb)
Disorders & Mutations for OGT
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 300255 3 Novoseek disease relationships for OGT gene
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Medical News for OGT (Possibly Related Articles in
Doctor's Guide )
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--
Publications for OGT (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/88 PubMed articles for OGT gene (see all 88
): O-linked GlcNAc transferase is a conserved nucleocytoplasmic protein containing tetratricopeptide repeats. (PubMed id 9083068) 2, 3, 4 Lubas W.A.... Hanover J.A. (1997) Human O-GlcNAc transferase (OGT): genomic structure, analysis of splice variants, fine mapping in Xq13.1. (PubMed id 11773972) 1, 3, 4 Nolte D. and Muller U. (2002) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Human Sin3 deacetylase and trithorax-related Set1/Ash2 histone H3-K4 methyltransferase are tethered together selectively by the cell-proliferation factor HCF-1. (PubMed id 12670868) 3, 4 Wysocka J....Herr W. (2003) UDP-N-acetylglucosaminyl transferase (OGT) in brain tissue: temperature sensitivity and subcellular distribution of cytosolic and nuclear enzyme. (PubMed id 12911634) 1, 3 Okuyama R. and Marshall S. (2003) Roles of the tetratricopeptide repeat domain in O-GlcNAc transferase targeting and protein substrate specificity. (PubMed id 12724313) 1, 3 Iyer S.P. and Hart G.W. (2003) Mitochondrial and nucleocytoplasmic isoforms of O-linked GlcNAc transferase encoded by a single mammalian gene. (PubMed id 12504895) 1, 3 Hanover J.A....Love D.C. (2003) Mitochondrial and nucleocytoplasmic targeting of O-linked GlcNAc transferase. (PubMed id 12538765) 1, 3 Love D.C....Kochran J. (2003) Functional expression of O-linked GlcNAc transferase. Domain structure and substrate specificity. (PubMed id 10753899) 1, 3 Lubas W.A. and Hanover J.A. (2000) OGT functions as a catalytic chaperone under heat stress response: a unique defense role of OGT in hyperthermia. (PubMed id 15336570) 1, 3 Sohn K.C....Do S.I. (2004)
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Genome Databases showing OGT
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing OGT
(According to HUGE )
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Specialized Databases showing OGT (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
Functional Glycomics Gateway - GTase http://www.functionalglycomics.org/glycomics/molecule/jsp/glycoEnzyme/viewGlycoEnzyme.jsp?gbpId=gt_hum_554
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-- Services for OGT (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for OGT:
Search Tocris compounds for OGT
Antibodies for OGT
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009