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Aliases for OFD1P17 Gene

Aliases for OFD1P17 Gene

  • OFD1 Pseudogene 17 2 3 5
  • Oral-Facial-Digital Syndrome 1, Pseudogene 1 2 3
  • Oral-Facial-Digital Syndrome 1 Pseudogene 3
  • OFD1 Pseudogene 1 3
  • 71-7A3 3
  • 71-7A5 3
  • C5orf1 3
  • OFD1P1 3

External Ids for OFD1P17 Gene

Previous HGNC Symbols for OFD1P17 Gene

  • C5orf1
  • OFD1P1

Summaries for OFD1P17 Gene

GeneCards Summary for OFD1P17 Gene

OFD1P17 (OFD1 Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OFD1P17 Gene

Genomics for OFD1P17 Gene

Regulatory Elements for OFD1P17 Gene

Enhancers for OFD1P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F037378 1.1 ENCODE 22.7 +170.3 170322 1.3 PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 CBX5 WDR70 OFD1P17 C5orf42 KCTD9P5
GH05F036873 2.2 ENCODE 10 -332.0 -332034 6.4 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 WDR70 C5orf42 OFD1P17 ENSG00000250155 NIPBL KRT18P31
GH05F036928 1.2 Ensembl ENCODE 14.4 -280.1 -280095 0.6 PKNOX1 ZNF76 INSM2 FEZF1 GLI4 ZNF2 ZEB1 GLIS2 ZNF302 ZNF366 WDR70 C5orf42 ENSG00000250155 OFD1P17 NIPBL KRT18P31 GC05P037069
GH05F036238 1.5 FANTOM5 ENCODE 11 -967.8 -967757 4.7 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC RANBP3L OFD1P17 ENSG00000272103 SPEF2 NADK2 SLC1A3 NADK2-AS1
GH05F036743 1.3 Ensembl ENCODE 11 -463.9 -463946 2.8 ATF1 SIN3A GLI4 ZNF2 YY1 ZNF121 ZNF766 GLIS2 ZNF302 GATA2 WDR70 OFD1P17 ENSG00000250155 CAPSL GC05M036752
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OFD1P17 on UCSC Golden Path with GeneCards custom track

Promoters for OFD1P17 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001868266 201 800 POLR2A RNF2 NRF1 PRDM1

Genomic Location for OFD1P17 Gene

Chromosome:
5
Start:
37,208,999 bp from pter
End:
37,212,497 bp from pter
Size:
3,499 bases
Orientation:
Plus strand

Genomic View for OFD1P17 Gene

Genes around OFD1P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OFD1P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OFD1P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OFD1P17 Gene

Proteins for OFD1P17 Gene

Post-translational modifications for OFD1P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OFD1P17 Gene

Domains & Families for OFD1P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OFD1P17 Gene

Function for OFD1P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OFD1P17 Gene

Localization for OFD1P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OFD1P17 Gene

Pathways & Interactions for OFD1P17 Gene

SuperPathways for OFD1P17 Gene

No Data Available

Interacting Proteins for OFD1P17 Gene

Gene Ontology (GO) - Biological Process for OFD1P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OFD1P17 Gene

Transcripts for OFD1P17 Gene

mRNA/cDNA for OFD1P17 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OFD1P17 Gene

No ASD Table

Relevant External Links for OFD1P17 Gene

GeneLoc Exon Structure for
OFD1P17
ECgene alternative splicing isoforms for
OFD1P17

Expression for OFD1P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OFD1P17 Gene

mRNA differential expression in normal tissues according to GTEx for OFD1P17 Gene

This gene is overexpressed in Testis (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of OFD1P17 Gene:

OFD1P17
genes like me logo Genes that share expression patterns with OFD1P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OFD1P17 Gene

Orthologs for OFD1P17 Gene

Evolution for OFD1P17 Gene

ENSEMBL:
Gene Tree for OFD1P17 (if available)
TreeFam:
Gene Tree for OFD1P17 (if available)

No data available for Orthologs for OFD1P17 Gene

Paralogs for OFD1P17 Gene

No data available for Paralogs for OFD1P17 Gene

Variants for OFD1P17 Gene

Relevant External Links for OFD1P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OFD1P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OFD1P17 Gene

Disorders for OFD1P17 Gene

No disorders were found for OFD1P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OFD1P17 Gene

Publications for OFD1P17 Gene

  1. Characterization of Cxorf5 (71-7A), a novel human cDNA mapping to Xp22 and encoding a protein containing coiled-coil alpha-helical domains. (PMID: 9722947) de Conciliis L. … Banfi S. (Genomics 1998) 2 3 64

Products for OFD1P17 Gene

Sources for OFD1P17 Gene

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