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Aliases & Descriptions for ODZ3
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| FLJ10474 2 | | FLJ10886 2 | | KIAA1455 1, 2, 3 | | TNM3 2, 3 | | Ten-3 3 | | Ten-M3 1 | | Ten-m3 2, 3 | | Tenascin-M3 3 |
| | | Descriptions |
|---|
| ODZ3-like protein 2 | | Protein Odd Oz/ten-m homolog 3 3 | | odd Oz/Ten-m homolog 3 2 | | odz, odd Oz/ten-m homolog 3 2 | | odz, odd Oz/ten-m homolog 3 (Drosophila) 2 |
|
| | Search outside databases for aliases for ODZ3 genePrevious GC identifers: GC04P184234 GC04P184346 GC04P184212 GC04P183744 |
Summaries for ODZ3(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: TEN3_HUMAN, Q9P273Function: May function as a cellular signal transducer |
Genomic Location for ODZ3
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ODZ3 gene 
Entrez Gene cytogenetic band: 4q35.1 Ensembl cytogenetic band: 4q35.1 HGNC cytogenetic band: 4q35ODZ3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure GeneLoc location for GC04P183482:
(about GC identifiers)
Start:
|
183,482,131 bp from pter |
End:
|
183,961,171 bp from pter |
Size:
|
479,041 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000004.10 NT_022792.17
| Proteins for ODZ3
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: TEN3_HUMAN, Q9P273 (See
protein sequence)Recommended Name: Teneurin-3 Size: 2699 amino acids; 300950 Da
Subunit: Homodimer; disulfide-linked (Probable)
Subcellular location: Membrane; Single-pass type II membrane protein (Probable)
Secondary accessions: Q5XUL9 Q96SY2 Q9NV77 Q9NVW1 Q9NZJ2Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001073946.1
ENSEMBL proteins: ENSP00000385276
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0016020 | membrane |
IEA | -- | | GO:0016021 | integral to membrane |
IEA | -- | About this table
Antibodies for ODZ3: Assays for ODZ3: | Protein
Domains/ Families for ODZ3(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9P273
ProtoNet protein and cluster: Q9P273 1 Blocks protein family: IPB011070 Globular protein
UniProtKB/Swiss-Prot: TEN3_HUMAN, Q9P273Domain: EGF-like domains 2 and 5 which have an odd number of cysteines might enable the formation of intermolecular disulfide bondsDomain: Cytoplasmic proline-rich regions could serve as docking domains for intracellular SH3-containing proteinsSimilarity: Belongs to the tenascin family. Teneurin subfamilySimilarity: Contains 8 EGF-like domainsSimilarity: Contains 5 NHL repeatsSimilarity: Contains 1 teneurin N-terminal domainSimilarity: Contains 23 YD repeats | Gene Function for ODZ3
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5): XM_497983
Applied Biosystems Silencer® siRNAs for ODZ3
Sigma-Aldrich siRNA for ODZ3  Sigma-Aldrich shRNA for ODZ3  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001080477                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001080477                                  untagged cDNA clones in CMV expression vector (see all 2): NM_001080477 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001080477
UniProtKB/Swiss-Prot: TEN3_HUMAN, Q9P273Function: May function as a cellular signal transducerGenatlas biochemistry entry for ODZ3:odd oz3 tenascin M (TNM),a late acting Drosophila pair-rule gene homolog3 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Odz3):
| Pathways & Interactions for ODZ3
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Interacting protein for ODZ3 (Q9P2732) via UniProtKB, MINT, and/or STRINGAbout this table
1 Gene Ontology (GO) biological process term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0007165 | signal transduction |
IEA | -- | About this table
|
Drugs & Compounds for ODZ3(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for ODZ3
|
Transcripts for ODZ3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5): XM_497983
Sigma-Aldrich siRNA for ODZ3  Sigma-Aldrich shRNA for ODZ3  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001080477 REFSEQ mRNAs for ODZ3 gene: NM_001080477.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001080477               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001080477                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001080477                                  untagged cDNA clones in CMV expression vector (see all 2): NM_001080477  Additional cDNA sequence: AB040888.2 AF195420.1 AK001336.1 AK001748.1 AK027473.1 AK125869.1 AK308489.1 AY726602.1 9 DOTS entries: DT.414355 DT.91653058 DT.40205558 DT.91692138 DT.121272674 DT.102829045 DT.97763390 DT.75106953 DT.95260704 24/92 AceView cDNA sequences (see all 92
):AU133387 AU119743 CA454304 AB040888 BM670316 AI080208 AK001748 BE382393 Z40842 AK125869 AU124680 AK027473 AA236806 AK001336 BQ892798 AI820014 AU126844 BM931190 AA903519 CB106684 AI191088 AI288227 BM712036 CA777388
highest scoring ESTs for ODZ3:AA142988 AA149382 AA150978 AA424477 AA449172 AA452858 AA476500 AA903519 AB040888 AI080208 Unigene Cluster for ODZ3: Odz, odd Oz/ten-m homolog 3 (Drosophila) Hs.130438 [show with all ESTs]Unigene Representative Sequence: NM_001080477
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000406950
|
Expression for ODZ3
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ODZ3 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ODZ3
1 / 2 / 3 5 probe-sets matching ODZ3 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.130438 UniProtKB/Swiss-Prot: TEN3_HUMAN, Q9P273Tissue specificity: Expressed in adult and fetal brain, slightly lower levels in testis and ovary, and intermediate levels in all other peripheral tissues examined. Not expressed in spleen or liver. Expression was high in brain, with highest levels in amygdala and caudate nucleus, followed by thalamus and subthalamic nucleus |
Orthologs for ODZ3
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ODZ3 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for ODZ3
ENSEMBL Gene Tree for ODZ3 | Paralogs for ODZ3(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for ODZ3 gene
- ODZ12 ODZ42 ODZ22
|
SNPs/Variants for ODZ3(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ODZ3 (up to first 250kb)
|
Disorders & Mutations for ODZ3
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 610083
|
Medical News for ODZ3(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ODZ3 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 7 PubMed articles for ODZ3 gene: |
Search for ODZ3
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ODZ3
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ODZ3
(According to HUGE)
About This Section
| |
Specialized Databases showing ODZ3(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ODZ3(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ODZ3:

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| | Recombinant Proteins (ODZ3) | | Antibodies (ODZ3) |
| | | Search Tocris compounds for ODZ3 |
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Incremental update: 13 Oct 2009
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