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Aliases for ODF3L2 Gene

Aliases for ODF3L2 Gene

  • Outer Dense Fiber Of Sperm Tails 3-Like 2 2 3 5
  • C19orf19 3 4
  • Chromosome 19 Open Reading Frame 19 2

External Ids for ODF3L2 Gene

Previous HGNC Symbols for ODF3L2 Gene

  • C19orf19

Previous GeneCards Identifiers for ODF3L2 Gene

  • GC19M000417
  • GC19M000234

Summaries for ODF3L2 Gene

GeneCards Summary for ODF3L2 Gene

ODF3L2 (Outer Dense Fiber Of Sperm Tails 3-Like 2) is a Protein Coding gene. An important paralog of this gene is ODF3L1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ODF3L2 Gene

Genomics for ODF3L2 Gene

Regulatory Elements for ODF3L2 Gene

Enhancers for ODF3L2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ODF3L2 on UCSC Golden Path with GeneCards custom track

Genomic Location for ODF3L2 Gene

463,346 bp from pter
474,983 bp from pter
11,638 bases
Minus strand

Genomic View for ODF3L2 Gene

Genes around ODF3L2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ODF3L2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ODF3L2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ODF3L2 Gene

Proteins for ODF3L2 Gene

  • Protein details for ODF3L2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Outer dense fiber protein 3-like protein 2
    Protein Accession:
    Secondary Accessions:
    • Q3SX65
    • Q8N1L2

    Protein attributes for ODF3L2 Gene

    289 amino acids
    Molecular mass:
    30781 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ODF3L2 Gene


neXtProt entry for ODF3L2 Gene

Proteomics data for ODF3L2 Gene at MOPED

Post-translational modifications for ODF3L2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ODF3L2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ODF3L2 Gene

Domains & Families for ODF3L2 Gene

Protein Domains for ODF3L2 Gene


Suggested Antigen Peptide Sequences for ODF3L2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the ODF3 family.
  • Contains 3 STPGR (Sperm-tail PG-rich) repeats.
  • Belongs to the ODF3 family.
  • Contains 3 STPGR (Sperm-tail PG-rich) repeats.
genes like me logo Genes that share domains with ODF3L2: view

No data available for Gene Families for ODF3L2 Gene

Function for ODF3L2 Gene

Phenotypes for ODF3L2 Gene

MGI mutant phenotypes for ODF3L2:
inferred from 1 alleles
GenomeRNAi human phenotypes for ODF3L2:
genes like me logo Genes that share phenotypes with ODF3L2: view

Animal Models for ODF3L2 Gene

MGI Knock Outs for ODF3L2:

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for ODF3L2 Gene

Localization for ODF3L2 Gene

Subcellular locations from

Jensen Localization Image for ODF3L2 Gene COMPARTMENTS Subcellular localization image for ODF3L2 gene
Compartment Confidence
cytoskeleton 5
extracellular 2
nucleus 2
cytosol 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ODF3L2 Gene

Pathways & Interactions for ODF3L2 Gene

SuperPathways for ODF3L2 Gene

No Data Available

Interacting Proteins for ODF3L2 Gene

Gene Ontology (GO) - Biological Process for ODF3L2 Gene


No data available for Pathways by source and SIGNOR curated interactions for ODF3L2 Gene

Drugs & Compounds for ODF3L2 Gene

No Compound Related Data Available

Transcripts for ODF3L2 Gene

mRNA/cDNA for ODF3L2 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ODF3L2 Gene

Outer dense fiber of sperm tails 3-like 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ODF3L2 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4
SP1: -
SP2: - -

Relevant External Links for ODF3L2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ODF3L2 Gene

mRNA expression in normal human tissues for ODF3L2 Gene

mRNA differential expression in normal tissues according to GTEx for ODF3L2 Gene

This gene is overexpressed in Testis (x32.5) and Muscle - Skeletal (x7.5).

SOURCE GeneReport for Unigene cluster for ODF3L2 Gene Hs.104777

genes like me logo Genes that share expression patterns with ODF3L2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ODF3L2 Gene

Orthologs for ODF3L2 Gene

This gene was present in the common ancestor of animals.

Orthologs for ODF3L2 Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia ODF3L2 35
  • 83.52 (n)
  • 79.78 (a)
ODF3L2 36
  • 80 (a)
(Mus musculus)
Mammalia Odf3l2 35
  • 79.64 (n)
  • 82.91 (a)
Odf3l2 16
Odf3l2 36
  • 82 (a)
(Rattus norvegicus)
Mammalia Odf3l2 35
  • 79.76 (n)
  • 81.82 (a)
(Bos Taurus)
Mammalia ODF3L2 36
  • 81 (a)
(Monodelphis domestica)
Mammalia ODF3L2 36
  • 54 (a)
(Ornithorhynchus anatinus)
Mammalia ODF3L2 36
  • 52 (a)
(Pan troglodytes)
Mammalia ODF3L2 36
  • 98 (a)
(Anolis carolinensis)
Reptilia ODF3L2 36
  • 48 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia odf3l2 35
  • 52.73 (n)
  • 43.03 (a)
(Danio rerio)
Actinopterygii odf3l2 36
  • 44 (a)
ODF3L2 (1 of 2) 36
  • 43 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP001620 35
  • 44.12 (n)
  • 35.27 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG10252 35
  • 44.18 (n)
  • 33.49 (a)
CG10252 36
  • 31 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.10233 36
  • 35 (a)
Species with no ortholog for ODF3L2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ODF3L2 Gene

Gene Tree for ODF3L2 (if available)
Gene Tree for ODF3L2 (if available)

Paralogs for ODF3L2 Gene

Paralogs for ODF3L2 Gene

(3) SIMAP similar genes for ODF3L2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ODF3L2: view

Variants for ODF3L2 Gene

Sequence variations from dbSNP and Humsavar for ODF3L2 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs34551779 - 464,310(-) CCCTG(C/T)GCGCC reference, missense
rs8105512 -- 474,013(+) ACACG(A/G)TCACA intron-variant, upstream-variant-2KB
rs62636883 -- 465,095(+) GGTGG(A/G)TGGGT intron-variant
rs62636884 -- 465,119(+) GATGG(A/G)TGGGT intron-variant
rs62636885 -- 465,124(+) ATGGG(A/T)TGATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ODF3L2 Gene

Variant ID Type Subtype PubMed ID
nsv428360 CNV Gain 18775914
dgv3498n71 CNV Loss 21882294
nsv910083 CNV Loss 21882294
dgv3500n71 CNV Loss 21882294
dgv3504n71 CNV Loss 21882294
dgv3505n71 CNV Loss 21882294
nsv910102 CNV Loss 21882294
nsv910109 CNV Loss 21882294
nsv509712 CNV Insertion 20534489
esv2671474 CNV Deletion 23128226
nsv470101 CNV Loss 18288195
dgv3506n71 CNV Loss 21882294
dgv3507n71 CNV Loss 21882294
nsv910117 CNV Gain 21882294
nsv910119 CNV Gain 21882294
dgv3508n71 CNV Loss 21882294
dgv3509n71 CNV Loss 21882294
esv23197 CNV Gain 19812545
esv1002488 CNV Deletion 20482838
esv1405790 CNV Deletion 17803354
nsv138338 CNV Insertion 16902084
esv28250 CNV Gain+Loss 19812545
esv996354 CNV Deletion 20482838
esv1453393 CNV Deletion 17803354
nsv138206 CNV Loss 16902084
esv1506097 CNV Insertion 17803354
esv33417 CNV Gain+Loss 17666407

Variation tolerance for ODF3L2 Gene

Gene Damage Index Score: 6.34; 76.80% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for ODF3L2 Gene

Disorders for ODF3L2 Gene

Relevant External Links for ODF3L2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ODF3L2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ODF3L2 Gene

Publications for ODF3L2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  3. MTR120/KIAA1383, a novel microtubule-associated protein, promotes microtubule stability and ensures cytokinesis. (PMID: 23264731) Fong K.W. … Chen J. (J. Cell Sci. 2013) 3
  4. The protein interaction landscape of the human CMGC kinase group. (PMID: 23602568) Varjosalo M. … Gstaiger M. (Cell Rep 2013) 3
  5. Variants in several genomic regions associated with asperger disorder. (PMID: 21182207) Salyakina D. … Pericak-Vance M.A. (Autism Res 2010) 3

Products for ODF3L2 Gene

Sources for ODF3L2 Gene