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Aliases &
Descriptions
for ODF3L1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| | | Descriptions |
|---|
| outer dense fiber of sperm tails 3-like 1 2 |
|
| |
Search outside databases for aliases for ODF3L1 genePrevious GC identifer: GC15P073804 |
Summaries
for ODF3L1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| -- |
Genomic Location
for ODF3L1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences)
About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
 Transcription factor binding sites upstream to the ODF3L1 gene 
Entrez Gene cytogenetic band: 15q24.2 Ensembl cytogenetic band: 15q24.2 HGNC cytogenetic band: 15q23ODF3L1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 15 GeneLoc Exon Structure GeneLoc location for GC15P073805:
(about GC identifiers)
Start:
|
73,803,374 bp from pter |
End:
|
73,807,082 bp from pter |
Size:
|
3,709 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000015.8 NT_010194.16
| Proteins
for ODF3L1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: OD3L1_HUMAN, Q8IXM7 (See
protein sequence)Recommended Name: Outer dense fiber protein 3-like protein 1 Size: 274 amino acids; 31065 DaREFSEQ proteins: NP_787077.1
ENSEMBL proteins: ENSP00000329584
Human Recombinant Proteins  OriGene Purified Recombinant Human Protein: ODF3L1
Antibodies for ODF3L1:
Assays for ODF3L1: | Protein
Domains/
Families
for ODF3L1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q8IXM7
ProtoNet protein and cluster: Q8IXM7 UniProtKB/Swiss-Prot: OD3L1_HUMAN, Q8IXM7Similarity: Belongs to the ODF3 familySimilarity: Contains 2 DUF1309 repeats | Gene Function
for ODF3L1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vector: NM_175881
 Applied Biosystems Silencer® siRNAs for ODF3L1
 Sigma-Aldrich siRNA for ODF3L1
Sigma-Aldrich shRNA for ODF3L1
Explore Sigma-Aldrich super-pooled esiRNAs
OriGene GFP tagged cDNA clone in CMV expression vector: NM_175881
Myc/DDK tagged cDNA clone in CMV expression vector: NM_175881
untagged cDNA clone in CMV expression vector: NM_175881
Primers:  Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
OriGene genome-wide validated SYBR primer pairs: NM_175881
| Pathways & Interactions
for ODF3L1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
-- |
Drugs & Compounds
for ODF3L1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for ODF3L1
|
Transcripts
for ODF3L1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene,
Expression Assays from Applied Biosystems)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vector: NM_175881
Sigma-Aldrich siRNA for ODF3L1
Sigma-Aldrich shRNA for ODF3L1
Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer® siRNAs: NM_175881 REFSEQ mRNAs for ODF3L1 gene: NM_175881.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_175881
OriGene GFP tagged cDNA clone in CMV expression vector: NM_175881
Myc/DDK tagged cDNA clone in CMV expression vector: NM_175881
untagged cDNA clone in CMV expression vector: NM_175881
Additional cDNA sequence: BC039862.1 1 DOTS entry: DT.99935653 10 AceView cDNA sequences:NM_175881 BC039862 BX114387 AI206644 AI671497 AI554042 AW236843 AI393597 AI201316 AA406451
 highest scoring ESTs for ODF3L1:AI554042 BC039862 AA410406 AI201316 AI206644 AI393597 AI671497 AW236843 BF853451 BX114387 Unigene Cluster for ODF3L1: Outer dense fiber of sperm tails 3-like 1 Hs.144348 [show with all ESTs]Unigene Representative Sequence: BM559646
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000332145
|
Expression
for ODF3L1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ODF3L1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ODF3L1
1 / 2 / 3 3 probe-sets matching ODF3L1 gene Data from
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: GGCATCAAGC
SOURCE GeneReport for Unigene cluster: Hs.144348
|
Orthologs
for ODF3L1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ODF3L1 gene from 4 species
About this table Species with no ortholog for ODF3L1
ENSEMBL Gene Tree for ODF3L1 | Paralogs
for ODF3L1(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for ODF3L1 gene
- ODF3B2 ODF32 ODF3L22
|
SNPs/Variants
for ODF3L1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ODF3L1 (up to first 250kb)
|
Disorders & Mutations
for ODF3L1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
| -- |
Medical News
for ODF3L1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for ODF3L1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 3 PubMed articles for ODF3L1 gene: |
Search for ODF3L1
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing ODF3L1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ODF3L1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ODF3L1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| About This Section
| --
| Services
for ODF3L1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section
| 
Products for ODF3L1:
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