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Aliases for ODF3L1 Gene

Aliases for ODF3L1 Gene

  • Outer Dense Fiber Of Sperm Tails 3-Like 1 2 3 5

External Ids for ODF3L1 Gene

Previous GeneCards Identifiers for ODF3L1 Gene

  • GC15P073804
  • GC15P073805
  • GC15P076016
  • GC15P052772

Summaries for ODF3L1 Gene

GeneCards Summary for ODF3L1 Gene

ODF3L1 (Outer Dense Fiber Of Sperm Tails 3-Like 1) is a Protein Coding gene. An important paralog of this gene is ODF3B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ODF3L1 Gene

Genomics for ODF3L1 Gene

Regulatory Elements for ODF3L1 Gene

Enhancers for ODF3L1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ODF3L1 on UCSC Golden Path with GeneCards custom track

Promoters for ODF3L1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ODF3L1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ODF3L1 Gene

75,723,944 bp from pter
75,727,688 bp from pter
3,745 bases
Plus strand

Genomic View for ODF3L1 Gene

Genes around ODF3L1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ODF3L1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ODF3L1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ODF3L1 Gene

Proteins for ODF3L1 Gene

  • Protein details for ODF3L1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Outer dense fiber protein 3-like protein 1
    Protein Accession:

    Protein attributes for ODF3L1 Gene

    274 amino acids
    Molecular mass:
    31065 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ODF3L1 Gene

Proteomics data for ODF3L1 Gene at MOPED

Post-translational modifications for ODF3L1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ODF3L1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ODF3L1 Gene

Domains & Families for ODF3L1 Gene

Protein Domains for ODF3L1 Gene


Suggested Antigen Peptide Sequences for ODF3L1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the ODF3 family.
  • Contains 2 STPGR (Sperm-tail PG-rich) repeats.
  • Belongs to the ODF3 family.
  • Contains 2 STPGR (Sperm-tail PG-rich) repeats.
genes like me logo Genes that share domains with ODF3L1: view

No data available for Gene Families for ODF3L1 Gene

Function for ODF3L1 Gene

Phenotypes for ODF3L1 Gene

GenomeRNAi human phenotypes for ODF3L1:
genes like me logo Genes that share phenotypes with ODF3L1: view

Animal Model Products

miRNA for ODF3L1 Gene

miRTarBase miRNAs that target ODF3L1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ODF3L1 Gene

Localization for ODF3L1 Gene

Subcellular locations from

Jensen Localization Image for ODF3L1 Gene COMPARTMENTS Subcellular localization image for ODF3L1 gene
Compartment Confidence
cytosol 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ODF3L1 Gene

Pathways & Interactions for ODF3L1 Gene

SuperPathways for ODF3L1 Gene

No Data Available

Interacting Proteins for ODF3L1 Gene

Gene Ontology (GO) - Biological Process for ODF3L1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ODF3L1 Gene

Drugs & Compounds for ODF3L1 Gene

No Compound Related Data Available

Transcripts for ODF3L1 Gene

mRNA/cDNA for ODF3L1 Gene

(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ODF3L1 Gene

Outer dense fiber of sperm tails 3-like 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ODF3L1 Gene

No ASD Table

Relevant External Links for ODF3L1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ODF3L1 Gene

mRNA expression in normal human tissues for ODF3L1 Gene

mRNA differential expression in normal tissues according to GTEx for ODF3L1 Gene

This gene is overexpressed in Testis (x26.2).

SOURCE GeneReport for Unigene cluster for ODF3L1 Gene Hs.144348

genes like me logo Genes that share expression patterns with ODF3L1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ODF3L1 Gene

Orthologs for ODF3L1 Gene

This gene was present in the common ancestor of animals.

Orthologs for ODF3L1 Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia ODF3L1 35
  • 84.18 (n)
  • 78.83 (a)
ODF3L1 36
  • 78 (a)
(Mus musculus)
Mammalia Odf3l1 35
  • 81.27 (n)
  • 71.9 (a)
Odf3l1 16
Odf3l1 36
  • 71 (a)
(Pan troglodytes)
Mammalia ODF3L1 35
  • 99.39 (n)
  • 99.64 (a)
ODF3L1 36
  • 100 (a)
(Rattus norvegicus)
Mammalia Odf3l1 35
  • 79.2 (n)
  • 70.44 (a)
(Bos Taurus)
Mammalia ODF3L1 36
  • 46 (a)
(Monodelphis domestica)
Mammalia ODF3L1 36
  • 58 (a)
(Ornithorhynchus anatinus)
Mammalia ODF3L1 36
  • 44 (a)
(Anolis carolinensis)
Reptilia ODF3L1 36
  • 39 (a)
(Danio rerio)
Actinopterygii odf3l2 35
  • 47.56 (n)
  • 39.84 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG10252 36
  • 25 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.10233 36
  • 35 (a)
Species with no ortholog for ODF3L1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ODF3L1 Gene

Gene Tree for ODF3L1 (if available)
Gene Tree for ODF3L1 (if available)

Paralogs for ODF3L1 Gene

Paralogs for ODF3L1 Gene

(2) SIMAP similar genes for ODF3L1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ODF3L1: view

Variants for ODF3L1 Gene

Sequence variations from dbSNP and Humsavar for ODF3L1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs55905564 - 75,725,111(+) AGGTC(C/T)GGGGC reference, missense
rs58432473 -- 75,726,734(+) CCTCA(C/G)CCTTC intron-variant
rs13329104 -- 75,723,716(+) CACCC(A/G)TGACC upstream-variant-2KB
rs62028878 -- 75,724,935(+) TTTAT(A/C)TGGAA intron-variant
rs79115912 -- 75,722,773(+) CCCTC(C/T)CTTAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ODF3L1 Gene

Variant ID Type Subtype PubMed ID
esv2749894 CNV Deletion 23290073
esv2749895 CNV Deletion 23290073
nsv527186 CNV Loss 19592680
dgv2416n71 CNV Loss 21882294

Variation tolerance for ODF3L1 Gene

Residual Variation Intolerance Score: 84.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.37; 76.92% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for ODF3L1 Gene

Disorders for ODF3L1 Gene

Relevant External Links for ODF3L1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ODF3L1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ODF3L1 Gene

Publications for ODF3L1 Gene

  1. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 67
  2. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ODF3L1 Gene

Sources for ODF3L1 Gene