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Aliases for ODF2L Gene

Aliases for ODF2L Gene

  • Outer Dense Fiber Of Sperm Tails 2-Like 2 3
  • DJ977L11.1 3
  • KIAA1229 4

External Ids for ODF2L Gene

Previous GeneCards Identifiers for ODF2L Gene

  • GC01M086527
  • GC01M086808
  • GC01M084923

Summaries for ODF2L Gene

GeneCards Summary for ODF2L Gene

ODF2L (Outer Dense Fiber Of Sperm Tails 2-Like) is a Protein Coding gene. GO annotations related to this gene include nucleotide binding. An important paralog of this gene is ODF2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ODF2L Gene

Genomics for ODF2L Gene

Regulatory Elements for ODF2L Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ODF2L Gene

86,346,824 bp from pter
86,396,342 bp from pter
49,519 bases
Minus strand

Genomic View for ODF2L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ODF2L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ODF2L Gene

Proteins for ODF2L Gene

  • Protein details for ODF2L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Outer dense fiber protein 2-like
    Protein Accession:
    Secondary Accessions:
    • A8MU56
    • B4E037
    • Q05C40
    • Q5BJG5
    • Q5TBX3
    • Q5TBX4
    • Q86X31

    Protein attributes for ODF2L Gene

    636 amino acids
    Molecular mass:
    73728 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAH29420.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAH47368.1; Type=Erroneous termination; Positions=397; Note=Translated as Glu.; Evidence={ECO:0000305}; Sequence=AK308351; Type=Frameshift; Positions=296; Evidence={ECO:0000305}; Sequence=BAA86543.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Alternative splice isoforms for ODF2L Gene

neXtProt entry for ODF2L Gene

Proteomics data for ODF2L Gene at MOPED

Post-translational modifications for ODF2L Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ODF2L Gene

Domains & Families for ODF2L Gene

Protein Domains for ODF2L Gene


Graphical View of Domain Structure for InterPro Entry



  • Belongs to the ODF2 family.
  • Belongs to the ODF2 family.
genes like me logo Genes that share domains with ODF2L: view

No data available for Gene Families for ODF2L Gene

Function for ODF2L Gene

Phenotypes for ODF2L Gene

genes like me logo Genes that share phenotypes with ODF2L: view

Animal Model Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ODF2L

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targets and HOMER Transcription for ODF2L Gene

Localization for ODF2L Gene

Subcellular locations from

Jensen Localization Image for ODF2L Gene COMPARTMENTS Subcellular localization image for ODF2L gene
Compartment Confidence
cytoskeleton 5
nucleus 3

Gene Ontology (GO) - Cellular Components for ODF2L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005813 centrosome IDA 21399614
genes like me logo Genes that share ontologies with ODF2L: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for ODF2L Gene

Pathways & Interactions for ODF2L Gene

SuperPathways for ODF2L Gene

No Data Available

Interacting Proteins for ODF2L Gene

Gene Ontology (GO) - Biological Process for ODF2L Gene


No data available for Pathways by source and SIGNOR curated interactions for ODF2L Gene

Drugs & Compounds for ODF2L Gene

No Compound Related Data Available

Transcripts for ODF2L Gene

Unigene Clusters for ODF2L Gene

Outer dense fiber of sperm tails 2-like:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ODF2L

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ODF2L Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14
SP1: - - - -
SP2: -
SP4: - - -
SP5: - -
SP6: -

Relevant External Links for ODF2L Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ODF2L Gene

mRNA expression in normal human tissues for ODF2L Gene

Protein differential expression in normal tissues from HIPED for ODF2L Gene

This gene is overexpressed in Milk (68.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for ODF2L Gene

SOURCE GeneReport for Unigene cluster for ODF2L Gene Hs.149360

genes like me logo Genes that share expression patterns with ODF2L: view

Protein tissue co-expression partners for ODF2L Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ODF2L Gene

Orthologs for ODF2L Gene

This gene was present in the common ancestor of chordates.

Orthologs for ODF2L Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia ODF2L 35
  • 90.19 (n)
  • 83.36 (a)
ODF2L 36
  • 72 (a)
(Canis familiaris)
Mammalia ODF2L 35
  • 90.28 (n)
  • 84.07 (a)
ODF2L 36
  • 76 (a)
(Mus musculus)
Mammalia Odf2l 35
  • 79.84 (n)
  • 75.3 (a)
Odf2l 16
Odf2l 36
  • 70 (a)
(Pan troglodytes)
Mammalia ODF2L 35
  • 99.35 (n)
  • 98.71 (a)
ODF2L 36
  • 92 (a)
(Rattus norvegicus)
Mammalia Odf2l 35
  • 79.44 (n)
  • 72.91 (a)
(Monodelphis domestica)
Mammalia ODF2L 36
  • 45 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 51 (a)
-- 36
  • 46 (a)
(Gallus gallus)
Aves ODF2L 35
  • 60.64 (n)
  • 45.96 (a)
ODF2L 36
  • 35 (a)
(Anolis carolinensis)
Reptilia ODF2L 36
  • 41 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia odf2l 35
  • 54.59 (n)
  • 38.13 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 14 (a)
Species with no ortholog for ODF2L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ODF2L Gene

Gene Tree for ODF2L (if available)
Gene Tree for ODF2L (if available)

Paralogs for ODF2L Gene

Paralogs for ODF2L Gene

(1) SIMAP similar genes for ODF2L Gene using alignment to 10 proteins:

genes like me logo Genes that share paralogs with ODF2L: view

Variants for ODF2L Gene

Sequence variations from dbSNP and Humsavar for ODF2L Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs166626 -- 86,353,474(+) TGGTC(A/T)GAATT intron-variant
rs166628 -- 86,366,435(+) acaca(C/T)acaca intron-variant
rs175363 -- 86,359,956(+) TACCA(C/T)TGAAC intron-variant
rs187971 -- 86,377,356(+) gtatc(G/T)gtggc intron-variant
rs272491 -- 86,349,005(+) ATACT(C/T)ACATC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ODF2L Gene

Variant ID Type Subtype PubMed ID
nsv871866 CNV Gain 21882294
nsv871081 CNV Loss 21882294
esv2714363 CNV Deletion 23290073
esv2714374 CNV Deletion 23290073
esv2657167 CNV Deletion 23128226

Variation tolerance for ODF2L Gene

Residual Variation Intolerance Score: 81.07% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.33; 70.66% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ODF2L Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ODF2L Gene

Disorders for ODF2L Gene

Relevant External Links for ODF2L

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with ODF2L: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ODF2L Gene

Publications for ODF2L Gene

  1. Prediction of the coding sequences of unidentified human genes. XV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10574462) Nagase T. … Ohara O. (DNA Res. 1999) 2 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 67
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 67
  4. Novel asymmetrically localizing components of human centrosomes identified by complementary proteomics methods. (PMID: 21399614) Jakobsen L. … Andersen J.S. (EMBO J. 2011) 67
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 67

Products for ODF2L Gene

Sources for ODF2L Gene

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