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Aliases & Descriptions for OAS2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.7.7.- 3 MGC78578 2
Descriptions (2'-5')oligo(A) synthetase 2 2 (2-5')oligo(A) synthetase 2 3 2'-5'-oligoadenylate synthetase 2 2 2'-5'-oligoadenylate synthetase 2 (69-71 kD) 1 , 2 2'-5'-oligoadenylate synthetase 2, 69/71kDa 2 2'5' oligoadenylate synthetase 2 2 2-5A synthetase 2 2 , 3 p69 OAS / p71 OAS 3 p69OAS / p71OAS 3
Search outside databases for aliases for OAS2 genePrevious GC identifers: GC12P112311 GC12P112935 GC12P113199 GC12P111828
Summaries for OAS2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for OAS2 : This gene encodes a member of the 2-5A synthetase family, essential proteins involved in the innateimmune response to viral infection. The encoded protein is induced by interferons and usesadenosine triphosphate in 2'-specific nucleotidyl transfer reactions to synthesize2',5'-oligoadenylates (2-5As). These molecules activate latent RNase L, which results inviral RNA degradation and the inhibition of viral replication. The three known members of thisgene family are located in a cluster on chromosome 12. Alternatively spliced transcript variantsencoding different isoforms have been described. [provided by RefSeq] UniProtKB/Swiss-Prot: OAS2_HUMAN, P29728 Function : May play a role in mediating resistance to virus infection, control of cell growth,differentiation, and apoptosis
Gene Wiki entry for OAS2
Genomic Location for OAS2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
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Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the OAS2 gene Entrez Gene cytogenetic band: 12q24.2 Ensembl cytogenetic band: 12q24.13 HGNC cytogenetic band: 12q24.2 OAS2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12P111879:
(about GC identifiers )
Start:
111,900,657 bp from pter
End:
111,933,911 bp from pter
Size:
33,255 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000012.10 NT_009775.16 Proteins for OAS2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: OAS2_HUMAN, P29728 (See
protein sequence )Recommended Name: 2'-5'-oligoadenylate synthetase 2 Size : 719 amino acids; 82431 Da
Subunit : Homodimer
Subcellular location : Mitochondrion. Nucleus. Microsome. Endoplasmic reticulum. Note=Associatedwith different subcellular fractions such as mitochondrial, nuclear, and rough/smooth microsomalfractions
Secondary accessions : Q86XX8Alternative splicing : 2 isoforms : P29728-1 P29728-2
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001027903.1 NP_002526.2 NP_058197.2 ENSEMBL proteins: ENSP00000342278 ENSP00000376362 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: OAS2 5 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for OAS2: Assays for OAS2:
Protein
Domains/ Families for OAS2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P29728 ProtoNet protein and cluster: P29728
2 Blocks protein families : IPB002934 DNA polymerase IPB006117 2-5-oligoadenylate synthetase UniProtKB/Swiss-Prot: OAS2_HUMAN, P29728 Similarity : Belongs to the 2-5A synthetase family
Gene Function for OAS2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
OriGene , and/or
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Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_002535 Applied Biosystems Silencer ® siRNAs for OAS2 Sigma-Aldrich siRNA for OAS2 Sigma-Aldrich shRNA for OAS2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001032731                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001032731                                  untagged cDNA clones in CMV expression vector (see all 5 ): BC010625  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_016817 UniProtKB/Swiss-Prot: OAS2_HUMAN, P29728 Function : May play a role in mediating resistance to virus infection, control of cell growth,differentiation, and apoptosis Catalytic activity : Binds double-stranded RNA and polymerizes ATP into PPP(A2'P5'A)N oligomers,which activate the latent RNase L that, when activated, cleaves single-stranded RNAs Induction : By interferonsEnzyme Number (IUBMB): EC 2.7.7.-
Genatlas biochemistry entry for OAS2 :2',5'-oligoadenylate synthetase 2,with two alternatively spliced isoforms 69kDa,71kDa,interferoninduced 4 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for OAS2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for OAS2 (Your Favorite Gene powered by Ingenuity) 2 Interacting proteins for OAS2 (ENSP00000342278 3 ) via UniProtKB, MINT, and/or STRING About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
TAS 2440675 GO:0006955 immune response
IEA --
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Drugs & Compounds for OAS2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for OAS2
Transcripts for OAS2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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shRNA from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_002535 Sigma-Aldrich siRNA for OAS2 Sigma-Aldrich shRNA for OAS2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001032731 NM_002535 NM_016817
REFSEQ mRNAs for OAS2 gene (3 alternative transcripts): NM_001032731.1 NM_002535.2 NM_016817.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001032731 NM_002535 NM_016817
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001032731                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001032731                                  untagged cDNA clones in CMV expression vector (see all 5 ): BC010625  
Additional cDNA sequence: AF074990.1 AK292796.1 AK292906.1 BC010625.1 BC023637.2 BC049215.1 BC053870.1 BC069052.1 CR592869.1 CR623050.1 M87284.1 M87434.1
7 DOTS entries : DT.404686 DT.75168849 DT.100691521 DT.100785794 DT.121200003 DT.121200004 DT.100763558
24/184 AceView cDNA sequences (see all 184
):BC023637 BC049215 BE043940 BG292035 AA040536 BM927515 AW835144 AA040537 BX444261 AW835147 AW168226 AW835145 CR623050 AW835148 AW835142 BM909558 BE882346 BQ643017 BM471377 BQ007650 BM927608 CF137864 CR592869 BQ063465
highest scoring ESTs for OAS2 :M87434 AA040142 AA622883 AA769661 AA906523 AF074990 AI151437 AI521829 AI671680 AI761210
Unigene Cluster for OAS2: 2'-5'-oligoadenylate synthetase 2, 69/71kDa Hs.414332 [show with all ESTs ] Unigene Representative Sequence: NM_002535 GeneLoc Exon Structure 5/8 Alternative Splicing Database (ASD) splice patterns (SP) for OAS2 (see all 8
) ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b ^ 11 SP1 :                                             SP2 :           -                                   SP3 :           -                                   SP4 :                                             SP5 :       -   -   -                                  
About this scheme ECgene alternative splicing isoforms for OAS2 2 Ensembl transcripts including schematic representations : ENST00000342315
ENST00000392583
Expression for OAS2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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OAS2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for OAS2 1 / 2 / 3
10 probe-sets matching OAS2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TACAGAGAAASOURCE GeneReport for Unigene cluster: Hs.414332 Expression variation in blood from EXPOLDB for OAS2
Orthologs for OAS2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for OAS2 gene from 5 species
About this table Species with no ortholog for OAS2 ENSEMBL Gene Tree for OAS2 Paralogs for OAS2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for OAS2 gene OASL 2 OAS1 2 OAS3 2
SNPs/Variants for OAS2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for OAS2 (up to first 250kb)
Disorders & Mutations for OAS2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
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Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
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and/or TGDB .)
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OMIM: 603350 1 PharmGKB disease relationship for OAS2 gene About this table Human Gene Mutation Database : OAS2 Genetic Association Database: OAS2 Human Genome Epidemiology Navigator: OAS2 (2 documents)
Medical News for OAS2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for OAS2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/23 PubMed articles for OAS2 gene (see all 23
): Type 1 diabetes and the OAS gene cluster: association with splicing polymorphism or haplotype? (PubMed id 16014697) 1, 3, 6 Tessier M.C....Polychronakos C. (2006) The finished DNA sequence of human chromosome 12. (PubMed id 16541075) 3, 4 Scherer S.E.... Gibbs R.A. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Genetic polymorphisms in interferon pathway and response to interferon treatment in hepatitis B patients: A pilot study. (PubMed id 12447867) 3, 6 King J.K....Chen P.J. (2002) The nature of the catalytic domain of 2'-5'-oligoadenylate synthetases. (PubMed id 10464285) 3, 4 Sarkar S.N.... Sen G.C. (1999) The human 2',5'-oligoadenylate synthetase locus is composed of three distinct genes clustered on chromosome 12q24.2 encoding the 100-, 69-, and 40-kDa forms. (PubMed id 9790745) 2, 3 Hovnanian A....Hovanessian A.G. (1998) The 69-kDa 2-5A synthetase is composed of two homologous and adjacent functional domains. (PubMed id 1577824) 3, 4 Marie I. and Hovanessian A.G. (1992) Differential expression and distinct structure of 69- and 100-kDa forms of 2-5A synthetase in human cells treated with interferon. (PubMed id 2211721) 3, 4 Marie I.... Hovanessian A.G. (1990) Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profiling. (PubMed id 12086872) 7 Yeoh E.J....Downing J.R. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 3 Strausberg R.L....Marra M.A. (2002)
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Genome Databases showing OAS2
(According to
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euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing OAS2
(According to HUGE )
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Specialized Databases showing OAS2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for OAS2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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