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Aliases for OARD1 Gene

Aliases for OARD1 Gene

  • O-Acyl-ADP-Ribose Deacylase 1 2 3
  • C6orf130 3 4 6
  • Terminal ADP-Ribose Protein Glycohydrolase 1 2 3
  • O-Acetyl-ADP-Ribose Deacetylase C6orf130 3
  • Chromosome 6 Open Reading Frame 130 2
  • O-Acetyl-ADP-Ribose Deacetylase 1 3
  • EC 3.5.1.- 4
  • DJ34B21.3 3
  • TARG1 3

External Ids for OARD1 Gene

Previous Symbols for OARD1 Gene

  • C6orf130

Summaries for OARD1 Gene

GeneCards Summary for OARD1 Gene

OARD1 (O-Acyl-ADP-Ribose Deacylase 1) is a Protein Coding gene. GO annotations related to this gene include deacetylase activity and purine nucleoside binding.

UniProtKB/Swiss-Prot for OARD1 Gene

  • Deacetylates O-acetyl-ADP ribose, a signaling molecule generated by the deacetylation of acetylated lysine residues in histones and other proteins. Catalyzes the deacylation of O-acetyl-ADP-ribose, O-propionyl-ADP-ribose and O-butyryl-ADP-ribose, yielding ADP-ribose plus acetate, propionate and butyrate, respectively

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OARD1 Gene

Genomics for OARD1 Gene

Genomic Location for OARD1 Gene

Start:
41,033,627 bp from pter
End:
41,097,787 bp from pter
Size:
64,161 bases
Orientation:
Minus strand

Genomic View for OARD1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OARD1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OARD1 Gene

No data available for Regulatory Elements for OARD1 Gene

Proteins for OARD1 Gene

  • Protein details for OARD1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y530-OARD1_HUMAN
    Recommended name:
    O-acetyl-ADP-ribose deacetylase 1
    Protein Accession:
    Q9Y530
    Secondary Accessions:
    • A6NEK4
    • A8K4H4
    • Q96F23

    Protein attributes for OARD1 Gene

    Size:
    152 amino acids
    Molecular mass:
    17025 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for OARD1 Gene

neXtProt entry for OARD1 Gene

Proteomics data for OARD1 Gene at MOPED

Post-translational modifications for OARD1 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys104

No data available for DME Specific Peptides for OARD1 Gene

Domains for OARD1 Gene

Protein Domains for OARD1 Gene

UniProtKB/Swiss-Prot:

OARD1_HUMAN
Domain:
  • Contains 1 Macro domain.:
    • Q9Y530
genes like me logo Genes that share domains with OARD1: view

No data available for Gene Families for OARD1 Gene

Function for OARD1 Gene

Molecular function for OARD1 Gene

UniProtKB/Swiss-Prot BiophysicochemicalProperties: Kinetic parameters: KM=182 uM for O-acetyl-ADP-ribose {ECO:0000269 PubMed:21849506};
UniProtKB/Swiss-Prot EnzymeRegulation: Subject to competitive inhibition by the product ADP-ribose.
UniProtKB/Swiss-Prot Function: Deacetylates O-acetyl-ADP ribose, a signaling molecule generated by the deacetylation of acetylated lysine residues in histones and other proteins. Catalyzes the deacylation of O-acetyl-ADP-ribose, O-propionyl-ADP-ribose and O-butyryl-ADP-ribose, yielding ADP-ribose plus acetate, propionate and butyrate, respectively

Enzyme Numbers (IUBMB) for OARD1 Gene

Gene Ontology (GO) - Molecular Function for OARD1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001883 purine nucleoside binding IDA 21849506
GO:0005515 protein binding IPI 23481255
GO:0019213 deacetylase activity IDA 21849506
genes like me logo Genes that share ontologies with OARD1: view

miRNA for OARD1 Gene

miRTarBase miRNAs that target OARD1

No data available for Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for OARD1 Gene

Localization for OARD1 Gene

No data available for Gene Ontology (GO) - Cellular Components for OARD1 Gene

Pathways for OARD1 Gene

SuperPathways for OARD1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for OARD1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0042278 purine nucleoside metabolic process IDA 21849506
genes like me logo Genes that share ontologies with OARD1: view

No data available for Pathways by source for OARD1 Gene

Transcripts for OARD1 Gene

Unigene Clusters for OARD1 Gene

O-acyl-ADP-ribose deacylase 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for OARD1 Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2a · 2b ^ 3a · 3b · 3c ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7a · 7b · 7c · 7d · 7e · 7f · 7g
SP1: - - - - -
SP2: - - - - - -
SP3: - - - -
SP4: - - - - - - -
SP5: - - - - - -
SP6: - - - - - - - -
SP7: - - - - - - -
SP8: - - -
SP9: - - -
SP10: - -
SP11: - -

Relevant External Links for OARD1 Gene

GeneLoc Exon Structure for
OARD1
ECgene alternative splicing isoforms for
OARD1

Expression for OARD1 Gene

mRNA expression in normal human tissues for OARD1 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for OARD1 Gene

SOURCE GeneReport for Unigene cluster for OARD1 Gene Hs.227457

genes like me logo Genes that share expressions with OARD1: view

Orthologs for OARD1 Gene

This gene was present in the common ancestor of animals.

Orthologs for OARD1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C6H6orf130 36
  • 99.78 (n)
  • 100 (a)
OARD1 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia OARD1 36
  • 91.45 (n)
  • 94.74 (a)
OARD1 37
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C12H6orf130 36
  • 94.08 (n)
  • 96.71 (a)
OARD1 37
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Oard1 36
  • 91.23 (n)
  • 95.39 (a)
Oard1 16
Oard1 37
  • 95 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia OARD1 37
  • 91 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia OARD1 37
  • 85 (a)
OneToOne
chicken
(Gallus gallus)
Aves C26H6ORF130 36
  • 74.22 (n)
  • 78.67 (a)
C26H6ORF130 37
  • 61 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia OARD1 37
  • 70 (a)
OneToOne
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.1173 36
zebrafish
(Danio rerio)
Actinopterygii oard1 36
  • 61.97 (n)
  • 64.08 (a)
oard1 37
  • 59 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP002604 36
  • 56.14 (n)
  • 55.64 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG33054 36
  • 56.83 (n)
  • 55.4 (a)
CG33054 37
  • 45 (a)
OneToMany
CG33056 37
  • 19 (a)
OneToMany
CG34261 37
  • 47 (a)
OneToMany
Species with no ortholog for OARD1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for OARD1 Gene

ENSEMBL:
Gene Tree for OARD1 (if available)
TreeFam:
Gene Tree for OARD1 (if available)

Paralogs for OARD1 Gene

Selected SIMAP similar genes for OARD1 Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with OARD1: view

No data available for Paralogs for OARD1 Gene

Variants for OARD1 Gene

Sequence variations from dbSNP and Humsavar for OARD1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs11280 -- 41,067,119(-) AAAGT(A/G)AGGAG utr-variant-3-prime
rs1060042 -- 41,066,852(-) AAATT(C/T)TACAT utr-variant-3-prime
rs2272986 -- 41,070,039(+) AAGAA(C/T)TGGCC intron-variant
rs2294695 -- 41,069,031(+) ATCCC(A/G)ATAAT intron-variant
rs2294696 -- 41,069,249(+) AGGTA(A/G)GTGAA intron-variant

Relevant External Links for OARD1 Gene

HapMap Linkage Disequilibrium report
OARD1
Human Gene Mutation Database (HGMD)
OARD1

No data available for Structural Variations from Database of Genomic Variants (DGV) for OARD1 Gene

Disorders for OARD1 Gene

No disorders were found for OARD1 Gene.

No data available for UniProtKB/Swiss-Prot for OARD1 Gene

Publications for OARD1 Gene

  1. Orphan macrodomain (human C6ORF130) is an o-acyl-ADP-ribose deacylase: solution structure and catalytic properties. (PMID: 21849506) Peterson F.C. … Volkman B.F. (J. Biol. Chem. 2011) 2 3 4
  2. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for OARD1 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate OARD1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for OARD1
    • Block miRNA regulation of OARD1 using miScript Target Protectors

    Sources for OARD1 Gene

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