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Aliases for NXPE3 Gene

Aliases for NXPE3 Gene

  • Neurexophilin And PC-Esterase Domain Family, Member 3 2 3
  • Family With Sequence Similarity 55, Member C 2 3
  • Protein FAM55C 3 4
  • FAM55C 3 4
  • NXPE Family Member 3 3
  • MSTP115 3
  • MST115 3

External Ids for NXPE3 Gene

Previous HGNC Symbols for NXPE3 Gene

  • FAM55C

Previous GeneCards Identifiers for NXPE3 Gene

  • GC03P101499

Summaries for NXPE3 Gene

GeneCards Summary for NXPE3 Gene

NXPE3 (Neurexophilin And PC-Esterase Domain Family, Member 3) is a Protein Coding gene. An important paralog of this gene is NXPE4.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NXPE3 Gene

Genomics for NXPE3 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for NXPE3 Gene

Start:
101,779,185 bp from pter
End:
101,828,231 bp from pter
Size:
49,047 bases
Orientation:
Plus strand

Genomic View for NXPE3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NXPE3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NXPE3 Gene

No data available for Regulatory Elements for NXPE3 Gene

Proteins for NXPE3 Gene

  • Protein details for NXPE3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q969Y0-NXPE3_HUMAN
    Recommended name:
    NXPE family member 3
    Protein Accession:
    Q969Y0
    Secondary Accessions:
    • A8K0X4
    • D3DN53
    • Q7Z2S8

    Protein attributes for NXPE3 Gene

    Size:
    559 amino acids
    Molecular mass:
    63800 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAQ13637.1; Type=Frameshift; Positions=345; Evidence={ECO:0000305};

neXtProt entry for NXPE3 Gene

Proteomics data for NXPE3 Gene at MOPED

Post-translational modifications for NXPE3 Gene

  • Glycosylation at Asn237, Asn292, and Asn346
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for NXPE3 Gene

Domains for NXPE3 Gene

Protein Domains for NXPE3 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q969Y0

UniProtKB/Swiss-Prot:

NXPE3_HUMAN :
  • Q969Y0
Family:
  • Belongs to the NXPE family.
genes like me logo Genes that share domains with NXPE3: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for NXPE3 Gene

Function for NXPE3 Gene

Phenotypes for NXPE3 Gene

GenomeRNAi human phenotypes for NXPE3:
genes like me logo Genes that share phenotypes with NXPE3: view

Animal Model Products

CRISPR Products

miRNA for NXPE3 Gene

miRTarBase miRNAs that target NXPE3

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NXPE3

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for NXPE3 Gene

Localization for NXPE3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NXPE3 Gene

Secreted.

Gene Ontology (GO) - Cellular Components for NXPE3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with NXPE3: view

No data available for Subcellular locations from COMPARTMENTS for NXPE3 Gene

Pathways for NXPE3 Gene

SuperPathways for NXPE3 Gene

No Data Available

Interacting Proteins for NXPE3 Gene

Gene Ontology (GO) - Biological Process for NXPE3 Gene

None

No data available for Pathways by source for NXPE3 Gene

Transcripts for NXPE3 Gene

Unigene Clusters for NXPE3 Gene

Neurexophilin and PC-esterase domain family, member 3:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NXPE3

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NXPE3 Gene

No ASD Table

Relevant External Links for NXPE3 Gene

GeneLoc Exon Structure for
NXPE3
ECgene alternative splicing isoforms for
NXPE3

Expression for NXPE3 Gene

mRNA expression in normal human tissues for NXPE3 Gene

mRNA differential expression in normal tissues according to GTEx for NXPE3 Gene

This gene is overexpressed in Muscle - Skeletal (5.6).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for NXPE3 Gene

SOURCE GeneReport for Unigene cluster for NXPE3 Gene Hs.595933

genes like me logo Genes that share expressions with NXPE3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for NXPE3 Gene

Orthologs for NXPE3 Gene

This gene was present in the common ancestor of chordates.

Orthologs for NXPE3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NXPE3 35
  • 99.46 (n)
  • 99.64 (a)
NXPE3 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia NXPE3 35
  • 90.52 (n)
  • 92.84 (a)
NXPE3 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NXPE3 35
  • 92.31 (n)
  • 93.56 (a)
NXPE3 36
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Nxpe3 35
  • 85.09 (n)
  • 88.55 (a)
Nxpe3 16
Nxpe3 36
  • 89 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NXPE3 36
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NXPE3 36
  • 78 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nxpe3 35
  • 86.05 (n)
  • 88.55 (a)
chicken
(Gallus gallus)
Aves NXPE3 35
  • 69.35 (n)
  • 68.82 (a)
NXPE3 36
  • 68 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia NXPE3 36
  • 61 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia nxpe3 35
  • 61.98 (n)
  • 62.96 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.12254 35
zebrafish
(Danio rerio)
Actinopterygii nxpe3 35
  • 57.91 (n)
  • 54.38 (a)
nxpe3 36
  • 49 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 29 (a)
ManyToMany
-- 36
  • 27 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
-- 36
  • 22 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 22 (a)
ManyToMany
Species with no ortholog for NXPE3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NXPE3 Gene

ENSEMBL:
Gene Tree for NXPE3 (if available)
TreeFam:
Gene Tree for NXPE3 (if available)

Paralogs for NXPE3 Gene

Paralogs for NXPE3 Gene

Selected SIMAP similar genes for NXPE3 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with NXPE3: view

Variants for NXPE3 Gene

Sequence variations from dbSNP and Humsavar for NXPE3 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs593666 -- 101,802,342(+) GTCAG(A/G)TGTGG intron-variant
rs594805 -- 101,805,823(+) aagAA(A/G)TTTTC intron-variant
rs595230 -- 101,805,917(+) GACAA(A/G)TAAAT intron-variant
rs605621 -- 101,820,576(-) cattt(C/G)cttgc intron-variant
rs610284 -- 101,815,498(-) CAGCA(C/T)TCTCC intron-variant

Relevant External Links for NXPE3 Gene

HapMap Linkage Disequilibrium report
NXPE3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for NXPE3 Gene

Disorders for NXPE3 Gene

No disorders were found for NXPE3 Gene.

No data available for UniProtKB/Swiss-Prot for NXPE3 Gene

Publications for NXPE3 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for NXPE3 Gene

Sources for NXPE3 Gene

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