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Aliases for NUP50P2 Gene

Aliases for NUP50P2 Gene

  • Nucleoporin 50 Pseudogene 2 2 3
  • RP3-425P12.4 5

External Ids for NUP50P2 Gene

Previous GeneCards Identifiers for NUP50P2 Gene

  • GC06P025249

Summaries for NUP50P2 Gene

GeneCards Summary for NUP50P2 Gene

NUP50P2 (Nucleoporin 50 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUP50P2 Gene

Genomics for NUP50P2 Gene

Regulatory Elements for NUP50P2 Gene

Enhancers for NUP50P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F024657 1.8 FANTOM5 Ensembl ENCODE 21.3 -476.1 -476091 11.6 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 C6orf62 NUP50P2 TDP2 KIAA0319 ACOT13
GH06F026102 1.2 ENCODE 21.3 +964.4 964406 3.6 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ENSG00000272462 ABT1 HMGN4 NUP50P2 GUSBP2 HFE HIST1H2APS5 BTN3A2 GC06P026112 PIR33351
GH06F026019 1.6 FANTOM5 ENCODE 12.2 +887.7 887743 16.2 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ABT1 HMGN4 ENSG00000272462 BTN3A2 ZNF322 HIST1H2APS5 HIST1H1C HIST1H2APS4 HIST1H2BPS1 HIST1H2BA
GH06F026120 1.6 FANTOM5 ENCODE 12.2 +984.1 984131 7.8 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 SP3 NFYC TBX21 SSRP1 ABT1 ENSG00000272462 HMGN4 HIST1H2APS5 ZNF322 HIST1H2APS4 HIST1H2BA HIST1H2BPS1 ENSG00000271071 LOC101928663
GH06F025165 1.6 FANTOM5 Ensembl ENCODE 11 +31.2 31244 12.0 PKNOX1 ATF1 SIN3A FEZF1 ZNF2 GTF3C2 FOS JUNB TSHZ1 ZNF488 LOC100533655 CMAHP NUP50P2 C6orf62 GC06M025165 ENSG00000217805
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NUP50P2 on UCSC Golden Path with GeneCards custom track

Promoters for NUP50P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001494145 -1544 3800 HDGF TBP PKNOX1 TBL1XR1 WRNIP1 RAD21 YY1 ETV6 CREM SMAD5

Genomic Location for NUP50P2 Gene

Chromosome:
6
Start:
25,139,844 bp from pter
End:
25,141,539 bp from pter
Size:
1,696 bases
Orientation:
Plus strand

Genomic View for NUP50P2 Gene

Genes around NUP50P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUP50P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUP50P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUP50P2 Gene

Proteins for NUP50P2 Gene

Post-translational modifications for NUP50P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUP50P2 Gene

Domains & Families for NUP50P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUP50P2 Gene

Function for NUP50P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUP50P2 Gene

Localization for NUP50P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NUP50P2 Gene

Pathways & Interactions for NUP50P2 Gene

SuperPathways for NUP50P2 Gene

No Data Available

Interacting Proteins for NUP50P2 Gene

Gene Ontology (GO) - Biological Process for NUP50P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NUP50P2 Gene

Transcripts for NUP50P2 Gene

mRNA/cDNA for NUP50P2 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NUP50P2 Gene

No ASD Table

Relevant External Links for NUP50P2 Gene

GeneLoc Exon Structure for
NUP50P2
ECgene alternative splicing isoforms for
NUP50P2

Expression for NUP50P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NUP50P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of NUP50P2 Gene:

NUP50P2
genes like me logo Genes that share expression patterns with NUP50P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NUP50P2 Gene

Orthologs for NUP50P2 Gene

Evolution for NUP50P2 Gene

ENSEMBL:
Gene Tree for NUP50P2 (if available)
TreeFam:
Gene Tree for NUP50P2 (if available)

No data available for Orthologs for NUP50P2 Gene

Paralogs for NUP50P2 Gene

No data available for Paralogs for NUP50P2 Gene

Variants for NUP50P2 Gene

Relevant External Links for NUP50P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUP50P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NUP50P2 Gene

Disorders for NUP50P2 Gene

Relevant External Links for NUP50P2

Genetic Association Database (GAD)
NUP50P2

No disorders were found for NUP50P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUP50P2 Gene

Publications for NUP50P2 Gene

No publications were found for NUP50P2 Gene.

Products for NUP50P2 Gene

Sources for NUP50P2 Gene

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