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Aliases & Descriptions for NUP214
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CAIN 1, 2, 3, 5 | | CAN 1, 2, 3, 5 | | D9S46E 1, 2, 5 | | KIAA0023 3 | | MGC104525 2 | | N214 1, 2 | | OTTHUMP00000064563 2 | | p250 2 |
| | | Descriptions |
|---|
| 214 kDa nucleoporin 3 | | CAN protein, putative oncogene 2 | | Nucleoporin Nup214 3 | | Protein CAN 3 | | nuclear pore complex protein Nup214 2 | | nucleoporin 214kD (CAIN) 1, 2 | | nucleoporin 214kDa 2 |
|
| | Search outside databases for aliases for NUP214 genePrevious GC identifers: GC09P125015 GC09P125547 GC09P127354 GC09P129277 GC09P131031 |
Summaries for NUP214(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for NUP214: The nuclear pore complex is a massive structure that extends across the nuclear envelope, forming a gateway that regulates the flow of macromolecules between the nucleus and the cytoplasm. Nucleoporins are the main components of the nuclear pore complex in eukaryotic cells. This gene is a member of the FG-repeat-containing nucleoporins. The protein encoded by this gene is localized to the cytoplasmic face of the nuclear pore complex where it is required for proper cell cycle progression and nucleocytoplasmic transport. The 3' portion of this gene forms a fusion gene with the DEK gene on chromosome 6 in a t(6,9) translocation associated with acute myeloid leukemia and myelodysplastic syndrome. [provided by RefSeq] UniProtKB/Swiss-Prot: NU214_HUMAN, P35658Function: May serve as a docking site in the receptor-mediated import of substrates across the nuclear pore complexGene Wiki entry for NUP214 |
Genomic Location for NUP214
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the NUP214 gene 
Entrez Gene cytogenetic band: 9q34.1 Ensembl cytogenetic band: 9q34.13 HGNC cytogenetic band: 9q34NUP214 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 9 GeneLoc Exon Structure GeneLoc location for GC09P132990:
(about GC identifiers)
Start:
|
132,990,802 bp from pter |
End:
|
133,098,912 bp from pter |
Size:
|
108,111 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000009.10 NT_035014.4
| Proteins for NUP214
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: NU214_HUMAN, P35658 (See
protein sequence)Recommended Name: Nuclear pore complex protein Nup214 Size: 2090 amino acids; 213620 Da
Subunit: Homodimer. Interacts with DDX19, NUP88, XPO1 and XPO5
Subcellular location: Nucleus, nuclear pore complex. Note=Cytoplasmic filaments
PDB structure from and Proteopedia :2OIT (3D)
 3FHC (3D)
 
Secondary accessions: A6NFQ0 Q15010 Q3KQZ0 Q5JUP7 Q75R47 Q86XD3Alternative splicing: 5 isoforms: P35658-1 P35658-2 P35658-3 P35658-4 P35658-5 Post-translational modifications:
Probably glycosylated as it reacts with wheat germ agglutinin (WGA)1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_005076.3
ENSEMBL proteins: ENSP00000352400 ENSP00000346167
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for NUP214: Assays for NUP214: | Protein
Domains/ Families for NUP214(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P35658
ProtoNet protein and cluster: P35658 UniProtKB/Swiss-Prot: NU214_HUMAN, P35658Domain: Contains FG repeats | Gene Function for NUP214
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005085
Applied Biosystems Silencer® siRNAs for NUP214
Sigma-Aldrich siRNA for NUP214  Sigma-Aldrich shRNA for NUP214  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_005085                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005085                                  untagged cDNA clones in CMV expression vector (see all 2): AJ420413 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_005085
UniProtKB/Swiss-Prot: NU214_HUMAN, P35658Function: May serve as a docking site in the receptor-mediated import of substrates across the nuclear pore complexGenatlas biochemistry entry for NUP214:nucleoporin,involved in nucleocytoplasmic transport processes and cell cycle progression3 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Nup214):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for NUP214
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for NUP214 
5/90 Interacting proteins for NUP214 (ENSP000003461673 P356582) via UniProtKB, MINT, and/or STRING (see all 90
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for NUP214(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for NUP214
|
Transcripts for NUP214(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005085
Sigma-Aldrich siRNA for NUP214  Sigma-Aldrich shRNA for NUP214  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_005085 REFSEQ mRNAs for NUP214 gene: NM_005085.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_005085               OriGene GFP tagged cDNA clone in CMV expression vector: NM_005085                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005085                                  untagged cDNA clones in CMV expression vector (see all 2): AJ420413  Additional cDNA sequence: AB159230.1 AJ420413.1 AK302676.1 AK303016.1 AK307573.1 AK310406.1 AK310476.1 AK310515.1 AK316417.1 AK316435.1 AL832609.2 BC012500.1 BC045620.1 BC105998.1 BX537986.1 D14689.1 X64228.1 23 DOTS entries: DT.453259 DT.99946775 DT.91802533 DT.40244489 DT.92068544 DT.97819744 DT.92460700 DT.75189159 DT.121159449 DT.100798030 DT.95121236 DT.100798031 DT.121159432 DT.121159477 DT.75172818 DT.92460671 DT.92460693 DT.92460701 DT.95117258 DT.95121234 DT.97845015 DT.92460689 DT.95178225 24/335 AceView cDNA sequences (see all 335
):AI203438 BQ212823 BQ051602 BU187774 BU539474 AL040843 BM455135 BM560722 AU125828 BQ637014 BU164616 BF724988 AA286804 CB152346 BQ188124 AL699371 CB162015 AU100267 T12639 BM545068 BX495633 AI674135 AU127630 BU737134
highest scoring ESTs for NUP214:AL040843 AA004416 AA135786 AA193606 AA469302 AA516455 AA583028 AA921758 AI025524 AI026661 Unigene Cluster for NUP214: Nucleoporin 214kDa Hs.654530 [show with all ESTs]Unigene Representative Sequence: BC105998
GeneLoc Exon Structure
5/11 Alternative Splicing Database (ASD) splice patterns (SP) for NUP214 (see all 11
)
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | · | 5c | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20a | · | 20b | ^ | 21 | ^ | 22 | ^ | 23 | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 24a | · | 24b | ^ | 25 | ^ | 26a | · | 26b | ^ | 27 | ^ | 28 | ^ | 29 | ^ | 30 | ^ | 31a | · | 31b | ^ | 32a | · | 32b | · | 32c | ^ | 33a | · | 33b | ^ | 34 | |
| SP1: | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | - |   | |   | - |   | |   | |   | - |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for NUP214
2 Ensembl transcripts including schematic representations: ENST00000359428
ENST00000354226
|
Expression for NUP214
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| NUP214 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for NUP214
1 / 2 / 3 9 probe-sets matching NUP214 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTGGGTTTTC
SOURCE GeneReport for Unigene cluster: Hs.654530
Expression variation in blood from EXPOLDB for NUP214 UniProtKB/Swiss-Prot: NU214_HUMAN, P35658Tissue specificity: Expressed in thymus, spleen, bone marrow, kidney, brain and testis, but hardly in all other tissues or in whole embryos during development |
Orthologs for NUP214
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for NUP214 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for NUP214
ENSEMBL Gene Tree for NUP214 | Paralogs for NUP214(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for NUP214 gene
- NUP1532
|
SNPs/Variants for NUP214(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for NUP214 (up to first 250kb)
|
Disorders & Mutations for NUP214
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 114350 UniProtKB/Swiss-Prot: NU214_HUMAN, P35658
A chromosomal aberration involving NUP214 is found in a subset of acute myeloid leukemia (AML); also known as acute non-lymphocytic leukemia. Translocation t(6;9)(p23;q34) with DEK. It results in the formation of a DEK-CAN fusion gene A chromosomal aberration involving NUP214 is found in some cases of acute undifferentiated leukemia (AUL). Translocation t(6;9)(q21;q34.1) with SET Defects in NUP214 may be a cause of breast cancer2 Novoseek disease relationships for NUP214 gene
About this table
|
Medical News for NUP214(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for NUP214 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/74 PubMed articles for NUP214 gene (see all 74
):- The human CAN protein, a putative oncogene product associated with myeloid leukemogenesis, is a nuclear pore complex protein that faces the cytoplasm. (PubMed id 8108440)1, 2, 3, 4 Kraemer D.... Radu A. (1994)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- Large-scale characterization of HeLa cell nuclear phosphoproteins. (PubMed id 15302935)3, 4 Beausoleil S.A....Gygi S.P. (2004)
- Exportin-5, a novel karyopherin, mediates nuclear export of double- stranded RNA binding proteins. (PubMed id 11777942)3, 4 Brownawell A.M. and Macara I.G. (2002)
- The human homologue of yeast CRM1 is in a dynamic subcomplex with CAN/Nup214 and the novel nuclear pore component Nup88. (PubMed id 9049309)3, 4 Fornerod M.... Grosveld G. (1997)
- Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1. (PubMed id 7584026)3, 4 Nomura N....Tabata S. (1994)
- The translocation (6;9), associated with a specific subtype of acute myeloid leukemia, results in the fusion of two genes, dek and can, and the expression of a chimeric, leukemia-specific dek-can mRNA. (PubMed id 1549122)3, 4 Von Lindern M.... Grosveld G. (1992)
- The (6;9) chromosome translocation, associated with a specific subtype of acute nonlymphocytic leukemia, leads to aberrant transcription of a target gene on 9q34. (PubMed id 2370860)2, 3 von Lindern M....Grosveld G. (1990)
- Nucleoporins nup98 and nup214 participate in nuclear export of human immunodeficiency virus type 1 Rev. (PubMed id 9847314)1, 3 Zolotukhin A.S. and Felber B.K. (1999)
- Nup214 is required for CRM1-dependent nuclear protein export in vivo. (PubMed id 16943420)1, 3 Hutten S. and Kehlenbach R.H. (2006)
|
Search for NUP214
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing NUP214
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing NUP214
(According to HUGE)
About This Section
| |
Specialized Databases showing NUP214(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for NUP214(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for NUP214:

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Incremental update: 13 Oct 2009
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