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Aliases for NUP210P1 Gene

Aliases for NUP210P1 Gene

  • Nucleoporin 210 Pseudogene 1 2 3 5
  • Nucleoporin 210kDa Pseudogene 1 2 3
  • Chromosome 3 Open Reading Frame 46 2
  • C3orf46 3

External Ids for NUP210P1 Gene

Previous HGNC Symbols for NUP210P1 Gene

  • C3orf46

Previous GeneCards Identifiers for NUP210P1 Gene

  • GC03P126381

Summaries for NUP210P1 Gene

GeneCards Summary for NUP210P1 Gene

NUP210P1 (Nucleoporin 210 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUP210P1 Gene

Genomics for NUP210P1 Gene

Regulatory Elements for NUP210P1 Gene

Enhancers for NUP210P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G126522 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -133.5 -133493 8.6 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 GLIS2 ZNF143 PAF1 CHST13 TXNRD3NB TXNRD3 NUP210P1 OR7E29P C3orf22 ZXDC UROC1
GH03G126620 0.4 ENCODE 17.1 -39.4 -39372 0.7 JUND MAX NUP210P1 TXNRD3 LOC100419878 TXNRD3NB
GH03G126672 0.4 FANTOM5 0.4 +12.2 12184 0.1 NFIB GC03M126673 NUP210P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NUP210P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NUP210P1 Gene

Chromosome:
3
Start:
126,660,609 bp from pter
End:
126,671,939 bp from pter
Size:
11,331 bases
Orientation:
Plus strand

Genomic View for NUP210P1 Gene

Genes around NUP210P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUP210P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUP210P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUP210P1 Gene

Proteins for NUP210P1 Gene

Post-translational modifications for NUP210P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUP210P1 Gene

Domains & Families for NUP210P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUP210P1 Gene

Function for NUP210P1 Gene

Phenotypes for NUP210P1 Gene

GenomeRNAi human phenotypes for NUP210P1:
genes like me logo Genes that share phenotypes with NUP210P1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUP210P1 Gene

Localization for NUP210P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NUP210P1 Gene

Pathways & Interactions for NUP210P1 Gene

SuperPathways for NUP210P1 Gene

No Data Available

Interacting Proteins for NUP210P1 Gene

Gene Ontology (GO) - Biological Process for NUP210P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NUP210P1 Gene

Drugs & Compounds for NUP210P1 Gene

No Compound Related Data Available

Transcripts for NUP210P1 Gene

mRNA/cDNA for NUP210P1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NUP210P1 Gene

Nucleoporin 210kDa pseudogene 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NUP210P1 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5
SP1:
SP2: -

Relevant External Links for NUP210P1 Gene

GeneLoc Exon Structure for
NUP210P1
ECgene alternative splicing isoforms for
NUP210P1

Expression for NUP210P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NUP210P1 Gene

mRNA differential expression in normal tissues according to GTEx for NUP210P1 Gene

This gene is overexpressed in Testis (x52.2).

NURSA nuclear receptor signaling pathways regulating expression of NUP210P1 Gene:

NUP210P1

SOURCE GeneReport for Unigene cluster for NUP210P1 Gene:

Hs.145435
genes like me logo Genes that share expression patterns with NUP210P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NUP210P1 Gene

Orthologs for NUP210P1 Gene

Evolution for NUP210P1 Gene

ENSEMBL:
Gene Tree for NUP210P1 (if available)
TreeFam:
Gene Tree for NUP210P1 (if available)

No data available for Orthologs for NUP210P1 Gene

Paralogs for NUP210P1 Gene

No data available for Paralogs for NUP210P1 Gene

Variants for NUP210P1 Gene

Sequence variations from dbSNP and Humsavar for NUP210P1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000010046 -- 126,665,504(+) GCCGT(A/G)GGGTG intron-variant
rs1000072588 -- 126,660,283(+) CCCCT(C/T)TTTGA upstream-variant-2KB
rs1000401602 -- 126,664,953(+) GGTGG(A/T)TGCCC intron-variant
rs1000469760 -- 126,665,861(+) TTGGG(A/G)GGGTC intron-variant
rs1000520967 -- 126,669,253(+) CTGGG(A/T)GGTGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NUP210P1 Gene

Variant ID Type Subtype PubMed ID
dgv4852n100 CNV gain 25217958
nsv460842 CNV gain 19166990
nsv591524 CNV gain 21841781
nsv829718 CNV gain 17160897

Relevant External Links for NUP210P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUP210P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NUP210P1 Gene

Disorders for NUP210P1 Gene

Relevant External Links for NUP210P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NUP210P1

No disorders were found for NUP210P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUP210P1 Gene

Publications for NUP210P1 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for NUP210P1 Gene

Sources for NUP210P1 Gene

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