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Aliases for NUP210P1 Gene

Aliases for NUP210P1 Gene

  • Nucleoporin 210kDa Pseudogene 1 2 3
  • Chromosome 3 Open Reading Frame 46 2
  • C3orf46 3

External Ids for NUP210P1 Gene

Previous HGNC Symbols for NUP210P1 Gene

  • C3orf46

Previous GeneCards Identifiers for NUP210P1 Gene

  • GC03P126381

Summaries for NUP210P1 Gene

GeneCards Summary for NUP210P1 Gene

NUP210P1 (Nucleoporin 210kDa Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUP210P1 Gene

Genomics for NUP210P1 Gene

Genomic Location for NUP210P1 Gene

Start:
126,660,609 bp from pter
End:
126,671,939 bp from pter
Size:
11,331 bases
Orientation:
Plus strand

Genomic View for NUP210P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NUP210P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUP210P1 Gene

No data available for Regulatory Elements for NUP210P1 Gene

Proteins for NUP210P1 Gene

Post-translational modifications for NUP210P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUP210P1 Gene

Domains for NUP210P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUP210P1 Gene

Function for NUP210P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NUP210P1 Gene

Localization for NUP210P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NUP210P1 Gene

Pathways for NUP210P1 Gene

SuperPathways for NUP210P1 Gene

No Data Available

Interacting Proteins for NUP210P1 Gene

Gene Ontology (GO) - Biological Process for NUP210P1 Gene

None

No data available for Pathways by source for NUP210P1 Gene

Transcripts for NUP210P1 Gene

mRNA/cDNA for NUP210P1 Gene

(7) Selected AceView cDNA sequences:
(2) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NUP210P1 Gene

Nucleoporin 210kDa pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NUP210P1 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5
SP1:
SP2: -

Relevant External Links for NUP210P1 Gene

GeneLoc Exon Structure for
NUP210P1
ECgene alternative splicing isoforms for
NUP210P1

Expression for NUP210P1 Gene

mRNA expression in normal human tissues for NUP210P1 Gene

mRNA differential expression in normal tissues according to GTEx for NUP210P1 Gene

This gene is overexpressed in Testis (52.2).

SOURCE GeneReport for Unigene cluster for NUP210P1 Gene Hs.145435

genes like me logo Genes that share expressions with NUP210P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for NUP210P1 Gene

Orthologs for NUP210P1 Gene

Evolution for NUP210P1 Gene

ENSEMBL:
Gene Tree for NUP210P1 (if available)
TreeFam:
Gene Tree for NUP210P1 (if available)

No data available for Orthologs for NUP210P1 Gene

Paralogs for NUP210P1 Gene

No data available for Paralogs for NUP210P1 Gene

Variants for NUP210P1 Gene

Sequence variations from dbSNP and Humsavar for NUP210P1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs1002614 -- 126,666,549(+) GCACC(A/G)TGACC intron-variant
rs1568441 -- 126,668,656(+) ACAGA(A/G)CACCC intron-variant
rs1568442 -- 126,668,676(+) TGAGG(C/T)GCCCT intron-variant
rs2139747 -- 126,669,032(+) TCAGA(A/G)GTCTT intron-variant
rs2271988 -- 126,666,102(+) AGGGG(C/T)CTTCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NUP210P1 Gene

Variant ID Type Subtype PubMed ID
nsv460842 CNV Gain 19166990
nsv829718 CNV Gain 17160897

Relevant External Links for NUP210P1 Gene

HapMap Linkage Disequilibrium report
NUP210P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NUP210P1 Gene

Disorders for NUP210P1 Gene

No disorders were found for NUP210P1 Gene.

No data available for UniProtKB/Swiss-Prot for NUP210P1 Gene

Publications for NUP210P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3

Products for NUP210P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate NUP210P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for NUP210P1
    • Block miRNA regulation of NUP210P1 using miScript Target Protectors

    Sources for NUP210P1 Gene

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