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Aliases for NUDT9P1 Gene

Aliases for NUDT9P1 Gene

  • Nudix Hydrolase 9 Pseudogene 1 2 3 5
  • Nudix (Nucleoside Diphosphate Linked Moiety X)-Type Motif 9 Pseudogene 1 2 3
  • Chromosome 10 Open Reading Frame 98 2
  • BA56M3.1 3
  • C10orf98 3

External Ids for NUDT9P1 Gene

Previous HGNC Symbols for NUDT9P1 Gene

  • C10orf98

Previous GeneCards Identifiers for NUDT9P1 Gene

  • GC10U900622
  • GC10M092901

Summaries for NUDT9P1 Gene

GeneCards Summary for NUDT9P1 Gene

NUDT9P1 (Nudix Hydrolase 9 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUDT9P1 Gene

Genomics for NUDT9P1 Gene

Regulatory Elements for NUDT9P1 Gene

Enhancers for NUDT9P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F090813 1 ENCODE 9.9 +339.5 339528 1.4 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 RPP30 HTR7 DDX18P6 LOC101926942 ENSG00000224750 GAPDHP28 LINC01375 SNRPD2P1 FAF2P1 NUDT9P1
GH10F091883 1.5 FANTOM5 Ensembl ENCODE 9.9 -732.4 -732422 5.3 ZFP64 ARID4B FEZF1 ZNF48 ZNF2 ZNF121 GLIS2 ZNF263 SP3 NFYC TNKS2-AS1 TNKS2 NUDT9P1 HECTD2 FGFBP3 ENSG00000273497 GC10M091835
GH10F091197 1.1 Ensembl ENCODE 7.1 -46.9 -46895 6.1 HDGF TBL1XR1 SIN3A YBX1 SCRT2 CREM ZNF680 CEBPB JUNB TBX21 NUDT9P1 ANKRD1 PIR60971 PCGF5
GH10F091205 1.1 Ensembl ENCODE 7 -53.1 -53052 1.2 CTCF HLF CEBPB CEBPG HMG20A ZNF384 RAD21 ZNF644 TEAD3 CEBPA NUDT9P1 PIR60971 GC10P091282
GH10F091161 0.7 FANTOM5 ENCODE 6.7 -10.2 -10197 3.7 ATF1 ARID4B SIN3A GLIS2 ZNF207 FOS SP5 JUNB PPARG SMARCB1 NUDT9P1 HECTD2 PCGF5 PIR60971
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NUDT9P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NUDT9P1 Gene

Chromosome:
10
Start:
91,151,995 bp from pter
End:
91,153,349 bp from pter
Size:
1,355 bases
Orientation:
Minus strand

Genomic View for NUDT9P1 Gene

Genes around NUDT9P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUDT9P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUDT9P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUDT9P1 Gene

Proteins for NUDT9P1 Gene

Post-translational modifications for NUDT9P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUDT9P1 Gene

Domains & Families for NUDT9P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUDT9P1 Gene

Function for NUDT9P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUDT9P1 Gene

Localization for NUDT9P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NUDT9P1 Gene

Pathways & Interactions for NUDT9P1 Gene

SuperPathways for NUDT9P1 Gene

No Data Available

Interacting Proteins for NUDT9P1 Gene

Gene Ontology (GO) - Biological Process for NUDT9P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NUDT9P1 Gene

Transcripts for NUDT9P1 Gene

mRNA/cDNA for NUDT9P1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NUDT9P1 Gene

Nudix (nucleoside diphosphate linked moiety X)-type motif 9 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NUDT9P1 Gene

No ASD Table

Relevant External Links for NUDT9P1 Gene

GeneLoc Exon Structure for
NUDT9P1
ECgene alternative splicing isoforms for
NUDT9P1

Expression for NUDT9P1 Gene

mRNA expression in normal human tissues for NUDT9P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of NUDT9P1 Gene:

NUDT9P1

SOURCE GeneReport for Unigene cluster for NUDT9P1 Gene:

Hs.441287
genes like me logo Genes that share expression patterns with NUDT9P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NUDT9P1 Gene

Orthologs for NUDT9P1 Gene

Evolution for NUDT9P1 Gene

ENSEMBL:
Gene Tree for NUDT9P1 (if available)
TreeFam:
Gene Tree for NUDT9P1 (if available)

No data available for Orthologs for NUDT9P1 Gene

Paralogs for NUDT9P1 Gene

No data available for Paralogs for NUDT9P1 Gene

Variants for NUDT9P1 Gene

Sequence variations from dbSNP and Humsavar for NUDT9P1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10675213 -- 91,152,010(+) TTTTT(-/T)GGTCT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs10881892 -- 91,153,735(+) TCCAC(C/T)GCAGA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs11186457 -- 91,153,072(+) GGTGG(A/G)TAATT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs11186458 -- 91,153,737(+) CACTG(C/T)AGATC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs11186459 -- 91,154,348(+) tTTTC(A/C)TAGGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for NUDT9P1 Gene

Variant ID Type Subtype PubMed ID
esv2759776 CNV loss 17122850
nsv1048584 CNV gain 25217958

Relevant External Links for NUDT9P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUDT9P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NUDT9P1 Gene

Disorders for NUDT9P1 Gene

Relevant External Links for NUDT9P1

Genetic Association Database (GAD)
NUDT9P1
Human Genome Epidemiology (HuGE) Navigator
NUDT9P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NUDT9P1

No disorders were found for NUDT9P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUDT9P1 Gene

Publications for NUDT9P1 Gene

  1. Association of the NPAS3 gene and five other loci with response to the antipsychotic iloperidone identified in a whole genome association study. (PMID: 18521090) Lavedan C. … Polymeropoulos M.H. (Mol. Psychiatry 2009) 3 46 64
  2. Applicability of a genetic signature for enhanced iloperidone efficacy in the treatment of schizophrenia. (PMID: 19573479) Volpi S. … Lavedan C. (J Clin Psychiatry 2009) 3 46 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  5. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3 64

Products for NUDT9P1 Gene

Sources for NUDT9P1 Gene

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