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Aliases for NUDT4P1 Gene

Aliases for NUDT4P1 Gene

  • Nudix (Nucleoside Diphosphate Linked Moiety X)-Type Motif 4 Pseudogene 1 2 3

External Ids for NUDT4P1 Gene

Previous GeneCards Identifiers for NUDT4P1 Gene

  • GC01U990468
  • GC01M142626
  • GC01M143848
  • GC01M145136

Summaries for NUDT4P1 Gene

GeneCards Summary for NUDT4P1 Gene

NUDT4P1 (Nudix (Nucleoside Diphosphate Linked Moiety X)-Type Motif 4 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUDT4P1 Gene

Genomics for NUDT4P1 Gene

Regulatory Elements for NUDT4P1 Gene

Genomic Location for NUDT4P1 Gene

Start:
148,748,600 bp from pter
End:
148,752,401 bp from pter
Size:
3,802 bases
Orientation:
Plus strand

Genomic View for NUDT4P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NUDT4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUDT4P1 Gene

Proteins for NUDT4P1 Gene

Post-translational modifications for NUDT4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUDT4P1 Gene

Domains for NUDT4P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUDT4P1 Gene

Function for NUDT4P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NUDT4P1 Gene

Localization for NUDT4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NUDT4P1 Gene

Pathways for NUDT4P1 Gene

SuperPathways for NUDT4P1 Gene

No Data Available

Interacting Proteins for NUDT4P1 Gene

Gene Ontology (GO) - Biological Process for NUDT4P1 Gene

None

No data available for Pathways by source for NUDT4P1 Gene

Transcripts for NUDT4P1 Gene

mRNA/cDNA for NUDT4P1 Gene

(224) Selected AceView cDNA sequences:
(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NUDT4P1 Gene

Nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NUDT4P1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for NUDT4P1
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NUDT4P1 Gene

No ASD Table

Relevant External Links for NUDT4P1 Gene

GeneLoc Exon Structure for
NUDT4P1
ECgene alternative splicing isoforms for
NUDT4P1

Expression for NUDT4P1 Gene

mRNA expression in normal human tissues for NUDT4P1 Gene

mRNA differential expression in normal tissues according to GTEx for NUDT4P1 Gene

This gene is overexpressed in Heart - Left Ventricle (5.3).

SOURCE GeneReport for Unigene cluster for NUDT4P1 Gene Hs.601274

genes like me logo Genes that share expressions with NUDT4P1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for NUDT4P1 Gene

Orthologs for NUDT4P1 Gene

This gene was present in the common ancestor of animals.

Orthologs for NUDT4P1 Gene

Organism Taxonomy Gene Similarity Type Details
fruit fly
(Drosophila melanogaster)
Insecta CG6391 37
  • 57 (a)
Species with no ortholog for NUDT4P1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for NUDT4P1 Gene

ENSEMBL:
Gene Tree for NUDT4P1 (if available)
TreeFam:
Gene Tree for NUDT4P1 (if available)

Paralogs for NUDT4P1 Gene

No data available for Paralogs for NUDT4P1 Gene

Variants for NUDT4P1 Gene

Sequence variations from dbSNP and Humsavar for NUDT4P1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1341427 -- 148,748,841(-) GCGCC(C/T)GGGAG nc-transcript-variant
rs1378193 -- 148,747,135(+) TAGAC(C/T)GGGGG upstream-variant-2KB
rs1417816 -- 148,749,111(-) GGTTC(C/T)ATTCC nc-transcript-variant
rs2487614 -- 148,748,468(-) TTTGC(A/G)TGTGG upstream-variant-2KB
rs2794000 -- 148,746,707(+) tttca(A/G)gtctt upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for NUDT4P1 Gene

Variant ID Type Subtype PubMed ID
nsv7234 OTHER Inversion 18451855
nsv822 CNV Loss 18451855
esv23701 CNV Loss 19812545
nsv518120 CNV Loss 19592680

Relevant External Links for NUDT4P1 Gene

HapMap Linkage Disequilibrium report
NUDT4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NUDT4P1 Gene

Disorders for NUDT4P1 Gene

No disorders were found for NUDT4P1 Gene.

No data available for UniProtKB/Swiss-Prot for NUDT4P1 Gene

Publications for NUDT4P1 Gene

  1. Genetic rationale for microheterogeneity of human diphosphoinositol polyphosphate phosphohydrolase type 2. (PMID: 11376937) Caffrey J.J. … Shears S.B. (Gene 2001) 2 3
  2. Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions. (PMID: 15342556) Suzuki Y. … Sugano S. (Genome Res. 2004) 3

Products for NUDT4P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate NUDT4P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for NUDT4P1
    • Block miRNA regulation of NUDT4P1 using miScript Target Protectors

    Sources for NUDT4P1 Gene

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