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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

NUDT3 Gene

protein-coding   GIFtS: 56
GCID: GC06M034894

nudix (nucleoside diphosphate linked moiety X)-type motif...
  Search for NUDT3
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Aliases
for NUDT3 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section
Aliases
Nudix (Nucleoside Diphosphate Linked Moiety X)-Type Motif 31 2     DIPP-12 3
DIPP1 2 3     DIPP12 3
Diadenosine 5',5'''-P1,P6-Hexaphosphate Hydrolase 12 3     Diphosphoinositol Polyphosphate Phosphohydrolase 12
Nucleoside Diphosphate-Linked Moiety X Motif 32 3     EC 3.6.1.-3
Nudix Motif 32 3     EC 3.6.1.523

External Ids:    HGNC: 80501   Entrez Gene: 111652   Ensembl: ENSG000001126647   OMIM: 6092285   UniProtKB: O959893   

Export aliases for NUDT3 gene to outside databases

Previous GC identifers: GC06M034258 GC06M034302 GC06M034363 GC06M033978 GC06M034388


Summaries
for NUDT3 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
Entrez Gene summary for NUDT3:
NUDT3 belongs to the MutT, or Nudix, protein family. Nudix proteins act as homeostatic checkpoints at important stages
in nucleoside phosphate metabolic pathways, guarding against elevated levels of potentially dangerous intermediates,
like 8-oxo-dGTP, which promotes AT-to-CG transversions (Safrany et al., 1998 (PubMed 9822604)).(supplied by OMIM, Feb
2011)

UniProtKB/Swiss-Prot: NUDT3_HUMAN, O95989
Function: Cleaves a beta-phosphate from the diphosphate groups in PP-InsP5 (diphosphoinositol pentakisphosphate) and
[PP]2-InsP4 (bisdiphosphoinositol tetrakisphosphate), suggesting that it may play a role in signal transduction. InsP6
(inositol hexakisphophate) is not a substrate. Acts as a negative regulator of the ERK1/2 pathway. Also able to
catalyze the hydrolysis of dinucleoside oligophosphates, with Ap6A and Ap5A being the preferred substrates. The major
reaction products are ADP and p4a from Ap6A and ADP and ATP from Ap5A. Also able to hydrolyze 5-phosphoribose
1-diphosphate

Gene Wiki entry for NUDT3


Genomic Views
for NUDT3 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the NUDT3 gene promoter:
         STAT5B   NF-1/L   AML1a   FOXD3   E47   C/EBPalpha   Hand1   Chx10   SEF-1 (1)   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: NUDT3 promoter sequence
   Search SABiosciences Chromatin IP Primers for NUDT3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NUDT3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.2   Ensembl cytogenetic band:  6p21.31   HGNC cytogenetic band: 6p21.2

NUDT3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NUDT3 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M034894:  view genomic region     (about GC identifiers)

Start:
 34,255,997 bp from pter      End:
 34,360,451 bp from pter
Size:
 104,455 bases      Orientation:
 minus strand

Proteins
for NUDT3 gene

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section
UniProtKB/Swiss-Prot: NUDT3_HUMAN, O95989 (See protein sequence)
Recommended Name: Diphosphoinositol polyphosphate phosphohydrolase 1  
Size: 172 amino acids; 19471 Da
Cofactor: Binds 3 magnesium ions per subunit
Subunit: Monomer (By similarity)
Subcellular location: Cytoplasm (Probable)
2 PDB 3D structures from and Proteopedia for NUDT3:
2FVV (3D)        2Q9P (3D)    
Secondary accessions: B2R8N4

Explore the universe of human proteins at neXtProt for NUDT3: NX_O95989

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O95989

    • NUDT3 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_006694.1  
    ENSEMBL proteins: 
     ENSP00000351650  
    Reactome Protein details: O95989
    Human Recombinant Protein Products: 
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    ProSpec Recombinant Protein for NUDT3
    Uscn Proteins for NUDT3

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm IEA--


    NUDT3 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for NUDT3

    Protein Domains /
    Families
    for NUDT3 gene

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    NUDT3 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR015797 NUDIX_hydrolase_dom-like
     IPR020084 NUDIX_hydrolase_CS
     IPR000086 NUDIX_hydrolase_dom

    Graphical View of Domain Structure for InterPro Entry O95989

    ProtoNet protein and cluster: O95989

    1 Blocks protein family: IPB000086 NUDIX hydrolase

    UniProtKB/Swiss-Prot: NUDT3_HUMAN, O95989
    Similarity: Belongs to the Nudix hydrolase family. DIPP subfamily
    Similarity: Contains 1 nudix hydrolase domain


    Function
    for NUDT3 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section
    Function Summary:

         UniProtKB/Swiss-Prot: NUDT3_HUMAN, O95989
    Function: Cleaves a beta-phosphate from the diphosphate groups in PP-InsP5 (diphosphoinositol pentakisphosphate) and
    [PP]2-InsP4 (bisdiphosphoinositol tetrakisphosphate), suggesting that it may play a role in signal transduction. InsP6
    (inositol hexakisphophate) is not a substrate. Acts as a negative regulator of the ERK1/2 pathway. Also able to
    catalyze the hydrolysis of dinucleoside oligophosphates, with Ap6A and Ap5A being the preferred substrates. The major
    reaction products are ADP and p4a from Ap6A and ADP and ATP from Ap5A. Also able to hydrolyze 5-phosphoribose
    1-diphosphate
    Catalytic activity: Diphospho-myo-inositol polyphosphate + H(2)O = myo-inositol polyphosphate + phosphate
    Enzyme regulation: Inhibited by fluoride and InsP6
    Biophysicochemical properties: Kinetic parameters: KM=5.9 uM for Ap6A; KM=7.7 uM for Ap5A; KM=38 mM for 5-phosphoribose
    1-diphosphate; KM=4.2 nM for PP-InsP5; pH dependence: Optimum pH is 7-7.5;

         Genatlas biochemistry entry for NUDT3:
    nudix (nucleoside diphosphate linked moiety X)-type motif 3,hydrolase,most predominantly expressed in
    brain,heart,pancreas,liver,putative mouse cleaning gene whose functions is to cleanse the cell of potentially
    deleterious endogenous metabolites and to modulate the accumulation of intermediates in biochemical pathways

    Enzyme Numbers (IUBMB): EC 3.6.1.521 EC 3.6.1.-1

    miRNA
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    8/25 QIAGEN miScript miRNA Assays for microRNAs that regulate NUDT3 (see all 25):
    hsa-miR-21* hsa-miR-3910 hsa-miR-520d-5p hsa-miR-410 hsa-miR-583 hsa-miR-124 hsa-miR-532-5p hsa-miR-23a
    SwitchGear 3'UTR luciferase reporter plasmid: NUDT3 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NUDT3 (see all 7)
    OriGene shRNA RFP: NUDT3
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    Gene Editing
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    Clone
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    Cell Line
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    In Situ Assay
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    Gene Ontology (GO): 5/9 molecular function terms (GO ID links to tree view) (see all 9):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000287magnesium ion binding IDA19585659
    GO:0008486diphosphoinositol-polyphosphate diphosphatase activity IDA10585413
    GO:0052840inositol diphosphate tetrakisphosphate diphosphatase activity IEA--
    GO:0052843inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity IEA--
    GO:0052844inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity IEA--


    NUDT3 for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for NUDT3:
     Decreased Hepatitis C virus re  Decreased TP53 protein express  Synthetic lethal with imatinib 


    Pathways & Interactions
    for NUDT3 gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Metabolism
    		Metabolism1.00
    2Synthesis of IP3 and IP4 in the cytosol
    		Inositol phosphate metabolism0.57
    3inositol pyrophosphates biosynthesis
    		Synthesis of pyrophosphates in the cytosol0.42

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    3        Reactome Pathways for NUDT3
        Metabolism
    Synthesis of pyrophosphates in the cytosol
    Inositol phosphate metabolism



    NUDT3 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for NUDT3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 19)

    5/41 Interacting proteins for NUDT3 (O959892, 3 ENSP000003516504) via UniProtKB, MINT, STRING, and/or I2D (see all 41)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ASB13Q8WXK32, 3, ENSP000003503314MINT-8264651 MINT-63332 I2D: score=5 STRING: ENSP00000350331
    RPL17P186212, 3, ENSP000003894654MINT-8264989 I2D: score=2 STRING: ENSP00000389465
    RPLP1P053862, 3MINT-63330 MINT-8265004 I2D: score=5 
    APEX1P276952, 3, ENSP000002167144MINT-8264627 I2D: score=2 STRING: ENSP00000216714
    CCL11P516712, 3, ENSP000003022344MINT-8264688 I2D: score=2 STRING: ENSP00000302234
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007267cell-cell signaling TAS10419486
    GO:0015961diadenosine polyphosphate catabolic process TAS10419486
    GO:0071544diphosphoinositol polyphosphate catabolic process IDA10585413


    NUDT3 for ontologies           About GeneDecksing



    Drugs & Compounds
    for NUDT3 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    NUDT3 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for NUDT3

    6 HMDB Compounds for NUDT3    About this table
    CompoundSynonyms CAS #PubMed Ids
    5-Diphosphoinositol pentakisphosphate5-diphospho-1D-myo-inositol pentakisphosphate (see all 11)----
    Diadenosine hexaphosphateAdenosine 5'-(heptahydrogen hexaphosphate) P->5'-ester with adenosine (see all 9)56983-23-4--
    MagnesiumMagnesium (see all 2)7439-95-4--
    Myo-inositol hexakisphosphate1D-myo-Inositol 1,2,3,4,5,6-hexakisphosphate (see all 9)83-86-3--
    PhosphateNFB Orthophosphate (see all 13)14265-44-2--
    WaterDihydrogen oxide (see all 2)7732-18-5--
    4 Novoseek chemical compound relationships for NUDT3 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ap(6)a 93.8 1 10419486 (1)
    dipp 91.4 7 9822604 (3), 12370170 (2)
    prpp 76.3 4 12370170 (2)
    pyrophosphate 57.4 3 9822604 (1), 15212765 (1)

    Search CenterWatch for drugs/clinical trials and news about NUDT3 

    Transcripts
    for NUDT3 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for NUDT3 gene: 
    NM_006703.3  

    Unigene Cluster for NUDT3:

    Nudix (nucleoside diphosphate linked moiety X)-type motif 3
    Hs.188882  [show with all ESTs]
    Unigene Representative Sequence: NM_001202470
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000358797(uc003ojl.3 uc021yyt.1)

    miRNA
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    8/25 QIAGEN miScript miRNA Assays for microRNAs that regulate NUDT3 (see all 25):
    hsa-miR-21* hsa-miR-3910 hsa-miR-520d-5p hsa-miR-410 hsa-miR-583 hsa-miR-124 hsa-miR-532-5p hsa-miR-23a
    SwitchGear 3'UTR luciferase reporter plasmid: NUDT3 3' UTR sequence
    Inhib. RNA
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    Clone
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    Additional cDNA sequence: 

    AF062529.1 AF062530.1 AK124804.1 AK313440.1 BC007727.2 BT019984.1 BT019985.1 

    24/28 DOTS entries (see all 28):

    DT.100816157  DT.318336  DT.100646332  DT.91865700  DT.99960049  DT.121358641  DT.121358935  DT.100816158 
    DT.95339214  DT.318334  DT.121359042  DT.40219001  DT.100741966  DT.102845466  DT.100742004  DT.121359032 
    DT.87009604  DT.95148488  DT.97804088  DT.100741970  DT.100816155  DT.100851413  DT.120731171  DT.121358763 

    4 AceView cDNA sequences:

    AW875186 BC024593 BE888564 BF805177 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for NUDT3    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b
    SP1:                    -     -                       -               
    SP2:              -     -     -     -     -                           
    SP3:                    -                                             
    SP4:                                                                  


    ECgene alternative splicing isoforms for NUDT3

    Expression
    for NUDT3 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    NUDT3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ATCTGTCCCT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)
    About this image
    See NUDT3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for NUDT3

    SOURCE GeneReport for Unigene cluster: Hs.188882

    UniProtKB/Swiss-Prot: NUDT3_HUMAN, O95989
    Tissue specificity: Widely expressed. Expressed at higher level in brain, heart, pancreas and liver. Also expressed in
    placenta, lung and kidney

        SABiosciences Custom PCR Arrays for NUDT3
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    In Situ
    Assay Products:     
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    Orthologs
    for NUDT3 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of eukaryotes.

    Orthologs for NUDT3 gene from 6/22 species (see all 22)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    chicken
    (Gallus gallus)    		 Aves E1C4K9_CHICK6
    		 Uncharacterized protein
    		 92(a)
    		 1 ↔ 1
    		 26(4218024-4238093)
    zebrafish
    (Danio rerio)    		 Actinopterygii zgc557462 similar to nudix (nucleotide diphosphate linked moiety more 80.47(n)   394120  BC048064.1 
    fruit fly
    (Drosophila melanogaster)    		 Insecta CG63913 diphosphoinositol-polyphosphate
    diphosphatase    		 57(a)   67F3   --
    worm
    (Caenorhabditis elegans)    		 Secernentea Y92H12BL.51 Protein Y92H12BL.5 49.47(n)
    44.44(a)    		   259365  NM_170801.4  NP_740784.1 
    thale cress
    (Arabidopsis thaliana)    		 eudicotyledons NUDT166
    NUDT186
    (see all 7)    		 nudix hydrolase 18
    (see all 7)    		 24(a)
    23(a)
    (see all 7)    		 many ↔ many
    many ↔ many
    (see all 7)    		 3(4004512-4006198)
    1(5124742-5126151)
    rice
    (Oryza sativa)    		 Liliopsida --
    --
    (see all 7)    		 hydrolase, NUDIX family, domain containing protein...
    hydrolase, NUDIX family, domain containing protein...
    (see all 7)    		 23(a)
    23(a)
    (see all 7)    		 many ↔ many
    many ↔ many
    (see all 7)    		 7(6136057-6140198)
    2(30619799-30621022)


    ENSEMBL Gene Tree for NUDT3 (if available)
    TreeFam Gene Tree for NUDT3 (if available) 

    Paralogs
    for NUDT3 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for NUDT3 gene
    NUDT42  NUDT112  NUDT102  
    3 SIMAP similar genes for NUDT3 using alignment to 1 protein entry:     NUDT3_HUMAN:
    NUDT4    NUDT10    NUDT11

    NUDT3 for paralogs           About GeneDecksing



    Genomic Variants
    for NUDT3 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1885 NCBI SNPs in NUDT3 are shown (see all 1885)     About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 6 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs1490233531,2
    		--34254471(+) TATCAC/TGGTAT 2 -- ds5001 int10--------
    rs1833267231,2
    		--34254501(+) TTTGGC/GTCTGT 2 -- ds5001 int10--------
    rs1874803581,2
    		--34254539(+) ACTAAA/GAGTAT 2 -- ds5001 int10--------
    rs11270841,2
    		--34254641(+) cggctC/Tactgc 2 -- int1 ds50011Minor allele frequency- T:0.00NA 2
    rs1924336651,2
    		--34254658(+) TGCCTC/GCCAGG 2 -- int1 ds50010--------
    rs1848456101,2
    		--34254684(+) CGCCTC/TAGCCT 2 -- ds5001 int10--------
    rs1881471291,2
    		--34254797(+) GTGATC/TCACCT 2 -- int1 ds50010--------
    rs1921500421,2
    		--34254838(+) GGTGTG/TAGCCA 2 -- ds5001 int10--------
    rs1845320901,2
    		--34254913(+) CACTAA/GATGAC 2 -- int1 ds50010--------
    rs1894528131,2
    		--34255087(+) TAAGCC/TACGGA 2 -- ut310--------

    HapMap Linkage Disequilibrium report for NUDT3 (34255997 - 34360451 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 6 variations for NUDT3
         5 CNVs: 39445 7572 93666 64483 81366
         1 Indel: 93667

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    Disorders / Diseases
    for NUDT3 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    NUDT3 for disorders           About MalaCards

    NUDT3 for disorders           About GeneDecksing

    OMIM gene information: 609228    OMIM disorders: --


    Export disorders for NUDT3 gene to outside databases

    Publications
    for NUDT3 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for NUDT3 gene, integrated from 9 sources (see all 25):
    (articles sorted by number of sources associating them with NUDT3)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. A novel context for the 'MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase. (PubMed id 9822604)1, 2, 3, 9 Safrany S.T.... Shears S.B. (1998)
    2. Nudix hydrolases that degrade dinucleoside and diphosphoinositol polyphosphates also have 5-phosphoribosyl 1-pyrophosphate (PRPP) pyrophosphatase activity that generates the glycolytic activator ribose 1,5-bisphosphate. (PubMed id 12370170)1, 2, 9 Fisher D.I.... Cartwright J.L. (2002)
    3. The diadenosine hexaphosphate hydrolases from Schizosaccharomyces pombe and Saccharomyces cerevisiae are homologues of the human diphosphoinositol polyphosphate phosphohydrolase. Overlapping substrate specificities in a MutT-type protein. (PubMed id 10419486)1, 2, 9 Safrany S.T.... Shears S.B. (1999)
    4. Crystal structure of human diphosphoinositol phosphat ase 1. (PubMed id 19585659)1, 2 Thorsell A.G....Hallberg B.M. (2009)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404)1, 2 Mungall A.J.... Beck S. (2003)
    7. Site-directed mutagenesis of diphosphoinositol polyphosphate phosphohydrolase, a dual specificity NUDT enzyme that attacks diadenosine polyphosphates and diphosphoinositol polyphosphates. (PubMed id 10585413)1, 2 Yang X.... Shears S.B. (1999)
    8. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (2011)
    9. A directed protein interaction network for investigat ing intracellular signal transduction. (PubMed id 21900206)1 Vinayagam A....Wanker E.E. (2011)
    10. Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048)1 Danielsen J.M....Nielsen M.L. (2011)

    External Searches for NUDT3 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  
      Query String
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      (Note: In FireFox, select the above section and copy using Ctrl-C)

    Genome Databases showing NUDT3 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 11165 HGNC: 8050 AceView: NUDT3.1 Ensembl:ENSG00000112664 euGenes: HUgn11165
    ECgene: NUDT3 H-InvDB: NUDT3

    Other Databases showing NUDT3 gene

    (According to HUGE)
    About This Section
    		   --

    Specialized Databases showing NUDT3 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for NUDT3 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for NUDT3 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for NUDT3 gene:
    Search GeneIP for patents involving NUDT3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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