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Aliases for NUCB1-AS1 Gene

Subcategory (RNA class) for NUCB1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NUCB1-AS1 Gene

  • NUCB1 Antisense RNA 1 2 3 5
  • NUCB1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NUCB1-AS1 Gene

Previous GeneCards Identifiers for NUCB1-AS1 Gene

  • GC19M049415

Summaries for NUCB1-AS1 Gene

GeneCards Summary for NUCB1-AS1 Gene

NUCB1-AS1 (NUCB1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUCB1-AS1 Gene

Genomics for NUCB1-AS1 Gene

Regulatory Elements for NUCB1-AS1 Gene

Enhancers for NUCB1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F048794 0.8 Ensembl ENCODE 15.1 +123.1 123058 2.7 HDGF ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF207 TEAD2 KDELR1 PRR12 GRWD1 ENSG00000197813 SNORD35A NUCB1-AS1 PLEKHA4 ALDH16A1 ENSG00000268157
GH19F048958 1.2 FANTOM5 ENCODE 11.5 -45.1 -45139 10.2 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ENSG00000269321 NUP62 PRR12 TEAD2 PPP1R15A RUVBL2 KDELR1 PIH1D1 GRWD1 ENSG00000268157
GH19F048977 1.4 FANTOM5 Ensembl ENCODE 11.4 -60.3 -60256 2.9 PKNOX1 ATF1 SIN3A GLIS2 ZNF143 FOS SP3 JUNB TSHZ1 ZNF623 KDELR1 NUP62 SNORD35A ALDH16A1 GRWD1 SNORD35B NUCB1-AS1 TSKS NUCB1 PTOV1-AS2
GH19F048843 0.2 ENCODE 11.2 +75.8 75813 0.2 CTCF PKNOX1 WRNIP1 TRIM22 ZBTB7A RAD21 JUND MBD1 ZNF143 SMC3 BCAT2 IZUMO1 RASIP1 NUCB1 TULP2 NUCB1-AS1 DBP SEC1P MAMSTR FUT2
GH19F048842 0.5 ENCODE 11.2 +76.0 75993 0.2 CTCF PKNOX1 ZNF654 WRNIP1 TRIM22 REST ZBTB7A RAD21 ARID1B JUND BCAT2 IZUMO1 RASIP1 NUCB1 TULP2 NUCB1-AS1 SEC1P DBP MAMSTR FUT2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NUCB1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NUCB1-AS1 Gene

Chromosome:
19
Start:
48,910,930 bp from pter
End:
48,918,891 bp from pter
Size:
7,962 bases
Orientation:
Minus strand

Genomic View for NUCB1-AS1 Gene

Genes around NUCB1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUCB1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUCB1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUCB1-AS1 Gene

Proteins for NUCB1-AS1 Gene

Post-translational modifications for NUCB1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUCB1-AS1 Gene

Domains & Families for NUCB1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUCB1-AS1 Gene

Function for NUCB1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUCB1-AS1 Gene

Localization for NUCB1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NUCB1-AS1 Gene

Pathways & Interactions for NUCB1-AS1 Gene

SuperPathways for NUCB1-AS1 Gene

No Data Available

Interacting Proteins for NUCB1-AS1 Gene

Gene Ontology (GO) - Biological Process for NUCB1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NUCB1-AS1 Gene

Transcripts for NUCB1-AS1 Gene

mRNA/cDNA for NUCB1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NUCB1-AS1 Gene

No ASD Table

Relevant External Links for NUCB1-AS1 Gene

GeneLoc Exon Structure for
NUCB1-AS1
ECgene alternative splicing isoforms for
NUCB1-AS1

Expression for NUCB1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NUCB1-AS1 Gene

genes like me logo Genes that share expression patterns with NUCB1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NUCB1-AS1 Gene

Orthologs for NUCB1-AS1 Gene

Evolution for NUCB1-AS1 Gene

ENSEMBL:
Gene Tree for NUCB1-AS1 (if available)
TreeFam:
Gene Tree for NUCB1-AS1 (if available)

No data available for Orthologs for NUCB1-AS1 Gene

Paralogs for NUCB1-AS1 Gene

No data available for Paralogs for NUCB1-AS1 Gene

Variants for NUCB1-AS1 Gene

Sequence variations from dbSNP and Humsavar for NUCB1-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10403434 -- 48,914,684(+) GCTCA(C/T)GTCTG intron-variant
rs10403687 -- 48,914,797(+) AAAAA(A/T)AGACC intron-variant
rs10413142 -- 48,912,604(+) GCTGA(C/G)GTGGG intron-variant
rs10424134 -- 48,917,797(+) ggccc(A/G)atttt intron-variant
rs10426872 -- 48,919,997(+) ctgct(G/T)gactc intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for NUCB1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2670526 CNV deletion 23128226
esv3644606 CNV loss 21293372
nsv833855 CNV loss 17160897
nsv833856 CNV loss 17160897
nsv833857 CNV loss 17160897
nsv9739 CNV gain+loss 18304495

Relevant External Links for NUCB1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUCB1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NUCB1-AS1 Gene

Disorders for NUCB1-AS1 Gene

Relevant External Links for NUCB1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NUCB1-AS1

No disorders were found for NUCB1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUCB1-AS1 Gene

Publications for NUCB1-AS1 Gene

No publications were found for NUCB1-AS1 Gene.

Products for NUCB1-AS1 Gene

Sources for NUCB1-AS1 Gene

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