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Aliases for NTRK3-AS1 Gene

Subcategory (RNA class) for NTRK3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NTRK3-AS1 Gene

  • NTRK3 Antisense RNA 1 2 3 5
  • NTRK3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NTRK3-AS1 Gene

Previous GeneCards Identifiers for NTRK3-AS1 Gene

  • GC15P088797

Summaries for NTRK3-AS1 Gene

GeneCards Summary for NTRK3-AS1 Gene

NTRK3-AS1 (NTRK3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NTRK3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NTRK3-AS1 Gene

Genomics for NTRK3-AS1 Gene

Regulatory Elements for NTRK3-AS1 Gene

Enhancers for NTRK3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H088258 0.5 ENCODE 14.4 +5.9 5865 0.9 CTCF NFIC POLR2A NFIB EZH2 NTRK3-AS1 NTRK3 LOC105370957
GH15H088246 1.1 Ensembl ENCODE 6.4 -5.6 -5631 0.8 CTCF MXI1 PKNOX1 RB1 SIN3A MAX ZIC2 RAD21 E2F1 ZNF316 MRPL46 MRPS11 ENSG00000173867 NTRK3-AS1 MED28P6
GH15H088238 0.8 Ensembl ENCODE 6 -13.7 -13713 1.2 CEBPB ZNF16 CEBPG ZBTB7B ENSG00000173867 NTRK3-AS1 MED28P6
GH15H088144 0.2 ENCODE 7 -107.5 -107454 1.2 NTRK3-AS1 MED28P6
GH15H088256 0.6 ENCODE 0.7 +3.1 3055 0.2 MXI1 ZNF341 CTBP2 SIN3A ZIC2 ZBTB26 EZH2 NTRK3-AS1 NTRK3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NTRK3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NTRK3-AS1 Gene

Genomic Locations for NTRK3-AS1 Gene
18,337 bases
Plus strand

Genomic View for NTRK3-AS1 Gene

Genes around NTRK3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NTRK3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NTRK3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NTRK3-AS1 Gene

Proteins for NTRK3-AS1 Gene

Post-translational modifications for NTRK3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NTRK3-AS1 Gene

Domains & Families for NTRK3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NTRK3-AS1 Gene

Function for NTRK3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NTRK3-AS1 Gene

Localization for NTRK3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NTRK3-AS1 Gene

Pathways & Interactions for NTRK3-AS1 Gene

SuperPathways for NTRK3-AS1 Gene

No Data Available

Interacting Proteins for NTRK3-AS1 Gene

Gene Ontology (GO) - Biological Process for NTRK3-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NTRK3-AS1 Gene

Drugs & Compounds for NTRK3-AS1 Gene

No Compound Related Data Available

Transcripts for NTRK3-AS1 Gene

mRNA/cDNA for NTRK3-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NTRK3-AS1 Gene

NTRK3 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NTRK3-AS1 Gene

No ASD Table

Relevant External Links for NTRK3-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NTRK3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NTRK3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NTRK3-AS1 Gene

This gene is overexpressed in Testis (x39.4).

SOURCE GeneReport for Unigene cluster for NTRK3-AS1 Gene:

genes like me logo Genes that share expression patterns with NTRK3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NTRK3-AS1 Gene

Orthologs for NTRK3-AS1 Gene

Evolution for NTRK3-AS1 Gene

Gene Tree for NTRK3-AS1 (if available)
Gene Tree for NTRK3-AS1 (if available)

No data available for Orthologs for NTRK3-AS1 Gene

Paralogs for NTRK3-AS1 Gene

No data available for Paralogs for NTRK3-AS1 Gene

Variants for NTRK3-AS1 Gene

Sequence variations from dbSNP and Humsavar for NTRK3-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000181502 -- 88,261,889(+) CGCCA(C/T)GAAGC intron-variant
rs1000462623 -- 88,252,976(+) ACCAT(A/C)CCTGA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000499717 -- 88,267,661(+) AAAGA(A/G)AGAAA intron-variant
rs1000537320 -- 88,258,045(+) AGACA(C/T)ACTAC intron-variant, upstream-variant-2KB
rs1000860253 -- 88,270,734(+) TCTAT(A/G)TTTTG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for NTRK3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv952021 CNV deletion 24416366
nsv827427 CNV gain 20364138
nsv1112675 CNV deletion 24896259

Relevant External Links for NTRK3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NTRK3-AS1 Gene

Disorders for NTRK3-AS1 Gene

Relevant External Links for NTRK3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for NTRK3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NTRK3-AS1 Gene

Publications for NTRK3-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for NTRK3-AS1 Gene

Sources for NTRK3-AS1 Gene

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