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Aliases for NTF6A Gene

Aliases for NTF6A Gene

  • Neurotrophin 6 Alpha (Pseudogene) 2 3 5
  • Neurotrophin 5 Pseudogene 3
  • NT4 Pseudogene 3
  • PSI-NT4 3
  • NTF5P 3
  • NTF6 3

External Ids for NTF6A Gene

Previous HGNC Symbols for NTF6A Gene

  • NTF6

Previous GeneCards Identifiers for NTF6A Gene

  • GC19M050200
  • GC19M049896
  • GC19M054204
  • GC19M054220
  • GC19M049528

Summaries for NTF6A Gene

GeneCards Summary for NTF6A Gene

NTF6A (Neurotrophin 6 Alpha (Pseudogene)) is a Pseudogene.

Additional gene information for NTF6A Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NTF6A Gene

Genomics for NTF6A Gene

Regulatory Elements for NTF6A Gene

Enhancers for NTF6A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H048958 2.1 FANTOM5 Ensembl ENCODE dbSUPER 14.8 +62.1 62093 10.2 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 ZC3H11A NFYC MEF2D NUP62 PRR12 ENSG00000269321 RUVBL2 PPP1R15A TSKS ENSG00000268047 IRF3 PIH1D1 CPT1C
GH19H048395 1.7 FANTOM5 Ensembl ENCODE 14.6 +627.4 627403 6.3 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 ZNF2 ZNF766 ZNF143 SP3 BICRA GRWD1 ENSG00000269321 NOP53-AS1 KDELR1 CYTH2 BSPH1 LOC105372430 ELSPBP1 NTF6B
GH19H049874 1.4 ENCODE dbSUPER 14.6 -850.6 -850612 5.2 MLX DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A MEF2D SSRP1 ZNF610 NUP62 POLD1 PNKP PTOV1-AS2 IRF3 SNORD35A ALDH16A1 SNORD35B AKT1S1 PRR12
GH19H049084 1.2 ENCODE 14.8 -59.6 -59606 2.9 HDGF ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF302 SNRNP70 PRR12 ENSG00000269321 ENSG00000268093 IRF3 NTF6B NTF6A LOC105372430 GRWD1 RPS11
GH19H049117 1.2 ENCODE 14.7 -92.7 -92687 2.9 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ZNF207 ZNF143 NUP62 SNRNP70 ENSG00000269321 IRF3 PRR12 PTOV1-AS2 SNORD35A SNORD35B ALDH16A1 GRWD1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NTF6A on UCSC Golden Path with GeneCards custom track

Genomic Locations for NTF6A Gene

Genomic Locations for NTF6A Gene
chr19:49,025,225-49,026,122
(GRCh38/hg38)
Size:
898 bases
Orientation:
Minus strand
chr19:49,528,482-49,529,379
(GRCh37/hg19)

Genomic View for NTF6A Gene

Genes around NTF6A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NTF6A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NTF6A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NTF6A Gene

Proteins for NTF6A Gene

Post-translational modifications for NTF6A Gene

No Post-translational modifications

No data available for DME Specific Peptides for NTF6A Gene

Domains & Families for NTF6A Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NTF6A Gene

Function for NTF6A Gene

Molecular function for NTF6A Gene

GENATLAS Biochemistry:
neurotrophic factor (neurotrophin) 6 cluster,including alpha like sequence

Phenotypes From GWAS Catalog for NTF6A Gene

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NTF6A Gene

Localization for NTF6A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NTF6A Gene

Pathways & Interactions for NTF6A Gene

SuperPathways for NTF6A Gene

No Data Available

Interacting Proteins for NTF6A Gene

Gene Ontology (GO) - Biological Process for NTF6A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NTF6A Gene

Drugs & Compounds for NTF6A Gene

No Compound Related Data Available

Transcripts for NTF6A Gene

mRNA/cDNA for NTF6A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NTF6A Gene

No ASD Table

Relevant External Links for NTF6A Gene

GeneLoc Exon Structure for
NTF6A
ECgene alternative splicing isoforms for
NTF6A

Expression for NTF6A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NTF6A Gene

NURSA nuclear receptor signaling pathways regulating expression of NTF6A Gene:

NTF6A
genes like me logo Genes that share expression patterns with NTF6A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NTF6A Gene

Orthologs for NTF6A Gene

Evolution for NTF6A Gene

ENSEMBL:
Gene Tree for NTF6A (if available)
TreeFam:
Gene Tree for NTF6A (if available)

No data available for Orthologs for NTF6A Gene

Paralogs for NTF6A Gene

No data available for Paralogs for NTF6A Gene

Variants for NTF6A Gene

Relevant External Links for NTF6A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NTF6A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NTF6A Gene

Disorders for NTF6A Gene

No disorders were found for NTF6A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NTF6A Gene

Publications for NTF6A Gene

  1. Human chromosome 19 contains the neurotrophin-5 gene locus and three related genes that may encode novel acidic neurotrophins. (PMID: 1496419) Berkemeier LR … Rosenthal A (Somatic cell and molecular genetics 1992) 2 3 22 60
  2. Mammalian neurotrophin-4: structure, chromosomal localization, tissue distribution, and receptor specificity. (PMID: 1313578) Ip NY … Squinto SP (Proceedings of the National Academy of Sciences of the United States of America 1992) 2 3 60

Products for NTF6A Gene

Sources for NTF6A Gene

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