Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NTF6A Gene

Aliases for NTF6A Gene

  • Neurotrophin 6 Alpha (Pseudogene) 2 3 5
  • Neurotrophin 5 Pseudogene 3
  • NT4 Pseudogene 3
  • PSI-NT4 3
  • NTF5P 3
  • NTF6 3

External Ids for NTF6A Gene

Previous HGNC Symbols for NTF6A Gene

  • NTF6

Previous GeneCards Identifiers for NTF6A Gene

  • GC19M050200
  • GC19M049896
  • GC19M054204
  • GC19M054220
  • GC19M049528

Summaries for NTF6A Gene

GeneCards Summary for NTF6A Gene

NTF6A (Neurotrophin 6 Alpha (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NTF6A Gene

Genomics for NTF6A Gene

Regulatory Elements for NTF6A Gene

Enhancers for NTF6A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F048395 1.8 FANTOM5 Ensembl ENCODE 16.2 +627.4 627403 6.3 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 YBX1 ZNF2 YY1 ENSG00000269321 GLTSCR1 TEAD2 GRWD1 EHD2 LOC105372430 ELSPBP1 TPRX2P NTF6B NTF6A
GH19F048958 1.7 FANTOM5 ENCODE 16.3 +62.1 62093 10.2 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ENSG00000269321 NUP62 PRR12 TEAD2 PPP1R15A RUVBL2 KDELR1 PIH1D1 GRWD1 ENSG00000268157
GH19F049084 1.2 ENCODE 16.3 -59.6 -59606 2.9 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ENSG00000269321 GRWD1 NTF6B NTF6A LOC105372430 PRR12 RPS11 SNRNP70 SNORD35A NTF4
GH19F049117 1.2 ENCODE 16.3 -92.7 -92687 2.9 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ZNF207 ENSG00000269321 PRR12 NTF6B NTF6A LOC105372430 NTN5 LIN7B PTH2 C19orf68 RUVBL2
GH19F049874 1.2 ENCODE 16.2 -850.6 -850612 5.2 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 PNKP AKT1S1 TEAD2 PTOV1-AS2 ENSG00000268157 NUP62 POLD1 GPR32 NTF6A NTF6B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NTF6A on UCSC Golden Path with GeneCards custom track

Genomic Location for NTF6A Gene

Chromosome:
19
Start:
49,025,225 bp from pter
End:
49,026,122 bp from pter
Size:
898 bases
Orientation:
Minus strand

Genomic View for NTF6A Gene

Genes around NTF6A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NTF6A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NTF6A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NTF6A Gene

Proteins for NTF6A Gene

Post-translational modifications for NTF6A Gene

No Post-translational modifications

No data available for DME Specific Peptides for NTF6A Gene

Domains & Families for NTF6A Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NTF6A Gene

Function for NTF6A Gene

Molecular function for NTF6A Gene

GENATLAS Biochemistry:
neurotrophic factor (neurotrophin) 6 cluster,including alpha like sequence

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NTF6A Gene

Localization for NTF6A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NTF6A Gene

Pathways & Interactions for NTF6A Gene

SuperPathways for NTF6A Gene

No Data Available

Interacting Proteins for NTF6A Gene

Gene Ontology (GO) - Biological Process for NTF6A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NTF6A Gene

Transcripts for NTF6A Gene

mRNA/cDNA for NTF6A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NTF6A Gene

No ASD Table

Relevant External Links for NTF6A Gene

GeneLoc Exon Structure for
NTF6A
ECgene alternative splicing isoforms for
NTF6A

Expression for NTF6A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NTF6A Gene

NURSA nuclear receptor signaling pathways regulating expression of NTF6A Gene:

NTF6A
genes like me logo Genes that share expression patterns with NTF6A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NTF6A Gene

Orthologs for NTF6A Gene

Evolution for NTF6A Gene

ENSEMBL:
Gene Tree for NTF6A (if available)
TreeFam:
Gene Tree for NTF6A (if available)

No data available for Orthologs for NTF6A Gene

Paralogs for NTF6A Gene

No data available for Paralogs for NTF6A Gene

Variants for NTF6A Gene

Relevant External Links for NTF6A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NTF6A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NTF6A Gene

Disorders for NTF6A Gene

No disorders were found for NTF6A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NTF6A Gene

Publications for NTF6A Gene

  1. Human chromosome 19 contains the neurotrophin-5 gene locus and three related genes that may encode novel acidic neurotrophins. (PMID: 1496419) Berkemeier L.R. … Rosenthal A. (Somat. Cell Mol. Genet. 1992) 2 3 22 64
  2. Mammalian neurotrophin-4: structure, chromosomal localization, tissue distribution, and receptor specificity. (PMID: 1313578) Ip N.Y. … Yancopoulos G.D. (Proc. Natl. Acad. Sci. U.S.A. 1992) 2 3 64

Products for NTF6A Gene

Sources for NTF6A Gene

Content
Loading form....