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Aliases for NT5CP2 Gene

Aliases for NT5CP2 Gene

  • 5',3'-Nucleotidase, Cytosolic Pseudogene 2 2
  • 5,3-Nucleotidase, Cytosolic Pseudogene 2 2 3 5

External Ids for NT5CP2 Gene

Previous GeneCards Identifiers for NT5CP2 Gene

  • GC14U900120
  • GC14M071995
  • GC14M073075
  • GC14M074005

Summaries for NT5CP2 Gene

GeneCards Summary for NT5CP2 Gene

NT5CP2 (5',3'-Nucleotidase, Cytosolic Pseudogene 2) is a Pseudogene.

Additional gene information for NT5CP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NT5CP2 Gene

Genomics for NT5CP2 Gene

GeneHancer (GH) Regulatory Elements for NT5CP2 Gene

Promoters and enhancers for NT5CP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I073536 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 +1.7 1733 3.5 ARID4B SIN3A DMAP1 ZNF48 YY1 SP5 MIER2 REST KAT8 NFIL3 ACOT1 NT5CP2 GC14M073540 ACOT2 BBOF1 ENSG00000258695 HEATR4
GH14I073748 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.7 -217.8 -217794 17.4 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 SP3 ELMSAN1 GC14P073756 MIR4505 ZNF410 PNMA1 RBM25 LOC100506476 NUMB FCF1 PTGR2
GH14I073310 Enhancer 1.1 Ensembl ENCODE 6.7 +228.1 228051 1.6 HDGF HDAC1 ATF1 NFRKB ZBTB40 ZNF335 ZNF366 FOS ATF7 ETV6 NUMB ENSG00000258944 NT5CP2 LOC101928123 GC14P073395
GH14I073717 Enhancer 1.1 Ensembl ENCODE dbSUPER 6.5 -178.9 -178914 2.9 MXI1 SMAD1 NFIB ZNF195 ZFHX2 LCORL ZNF776 POLR2A HNF4G ZNF350 RBM25 ENSG00000258559 NT5CP1 DNAL1 ABCD4 PNMA1 ZNF410 ELMSAN1 LOC100506476 ACOT1
GH14I073525 Enhancer 0.7 ENCODE 9.5 +13.4 13427 1.8 NCOA3 CTCF PKNOX1 FOXA2 NFIB MAX SIN3A RAD21 YY1 ZNF507 ACOT1 NT5CP2 PNMA1 HEATR4 ACOT2 ENSG00000258695 GC14M073540
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NT5CP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NT5CP2 Gene

Genomic Locations for NT5CP2 Gene
chr14:73,538,975-73,539,832
(GRCh38/hg38)
Size:
858 bases
Orientation:
Minus strand
chr14:74,005,679-74,006,536
(GRCh37/hg19)

Genomic View for NT5CP2 Gene

Genes around NT5CP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NT5CP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NT5CP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NT5CP2 Gene

Proteins for NT5CP2 Gene

Post-translational modifications for NT5CP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NT5CP2 Gene

Domains & Families for NT5CP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NT5CP2 Gene

Function for NT5CP2 Gene

Phenotypes From GWAS Catalog for NT5CP2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NT5CP2 Gene

Localization for NT5CP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NT5CP2 Gene

Pathways & Interactions for NT5CP2 Gene

SuperPathways for NT5CP2 Gene

No Data Available

Interacting Proteins for NT5CP2 Gene

Gene Ontology (GO) - Biological Process for NT5CP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NT5CP2 Gene

Drugs & Compounds for NT5CP2 Gene

No Compound Related Data Available

Transcripts for NT5CP2 Gene

mRNA/cDNA for NT5CP2 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NT5CP2 Gene

No ASD Table

Relevant External Links for NT5CP2 Gene

GeneLoc Exon Structure for
NT5CP2
ECgene alternative splicing isoforms for
NT5CP2

Expression for NT5CP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NT5CP2 Gene

mRNA differential expression in normal tissues according to GTEx for NT5CP2 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x4.2) and Brain - Putamen (basal ganglia) (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of NT5CP2 Gene:

NT5CP2
genes like me logo Genes that share expression patterns with NT5CP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NT5CP2 Gene

Orthologs for NT5CP2 Gene

Evolution for NT5CP2 Gene

ENSEMBL:
Gene Tree for NT5CP2 (if available)
TreeFam:
Gene Tree for NT5CP2 (if available)

No data available for Orthologs for NT5CP2 Gene

Paralogs for NT5CP2 Gene

No data available for Paralogs for NT5CP2 Gene

Variants for NT5CP2 Gene

Additional Variant Information for NT5CP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NT5CP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NT5CP2 Gene

Disorders for NT5CP2 Gene

No disorders were found for NT5CP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NT5CP2 Gene

Publications for NT5CP2 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for NT5CP2 Gene

Sources for NT5CP2 Gene

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