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Aliases for NT5CP1 Gene

Subcategory (RNA class) for NT5CP1 Gene

antisense

Aliases for NT5CP1 Gene

  • 5',3'-Nucleotidase, Cytosolic Pseudogene 1 2
  • 5,3-Nucleotidase, Cytosolic Pseudogene 1 2 3 5

External Ids for NT5CP1 Gene

ORGUL Members for NT5CP1 Gene

Previous GeneCards Identifiers for NT5CP1 Gene

  • GC14U900119
  • GC14M072027
  • GC14M073107
  • GC14M074037

Summaries for NT5CP1 Gene

GeneCards Summary for NT5CP1 Gene

NT5CP1 (5',3'-Nucleotidase, Cytosolic Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NT5CP1 Gene

Genomics for NT5CP1 Gene

Regulatory Elements for NT5CP1 Gene

Enhancers for NT5CP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G073570 0.7 ENCODE 0.7 +0.7 716 0.2 CTCF PKNOX1 SAP130 ARID4B SIN3A ZNF384 YBX1 RAD21 YY1 TEAD3 ACOT1 NT5CP1 GC14M073568
GH14G073571 0.7 ENCODE 0.7 +0.5 486 0.2 HDGF CTCF PKNOX1 SAP130 ARID4B SIN3A ZNF384 RAD21 YY1 TEAD3 NT5CP1 GC14M073568
GH14G073576 0.4 ENCODE 0.7 -4.9 -4885 0.2 FOS ENSG00000279026 NT5CP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NT5CP1 on UCSC Golden Path with GeneCards custom track

Promoters for NT5CP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000070644 1967 1801 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF2

Genomic Location for NT5CP1 Gene

Chromosome:
14
Start:
73,570,997 bp from pter
End:
73,571,667 bp from pter
Size:
671 bases
Orientation:
Minus strand

Genomic View for NT5CP1 Gene

Genes around NT5CP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NT5CP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NT5CP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NT5CP1 Gene

Proteins for NT5CP1 Gene

Post-translational modifications for NT5CP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NT5CP1 Gene

Domains & Families for NT5CP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NT5CP1 Gene

Function for NT5CP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NT5CP1 Gene

Localization for NT5CP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NT5CP1 Gene

Pathways & Interactions for NT5CP1 Gene

SuperPathways for NT5CP1 Gene

No Data Available

Interacting Proteins for NT5CP1 Gene

Gene Ontology (GO) - Biological Process for NT5CP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NT5CP1 Gene

Transcripts for NT5CP1 Gene

mRNA/cDNA for NT5CP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NT5CP1 Gene

No ASD Table

Relevant External Links for NT5CP1 Gene

GeneLoc Exon Structure for
NT5CP1
ECgene alternative splicing isoforms for
NT5CP1

Expression for NT5CP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NT5CP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of NT5CP1 Gene:

NT5CP1
genes like me logo Genes that share expression patterns with NT5CP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NT5CP1 Gene

Orthologs for NT5CP1 Gene

Evolution for NT5CP1 Gene

ENSEMBL:
Gene Tree for NT5CP1 (if available)
TreeFam:
Gene Tree for NT5CP1 (if available)

No data available for Orthologs for NT5CP1 Gene

Paralogs for NT5CP1 Gene

No data available for Paralogs for NT5CP1 Gene

Variants for NT5CP1 Gene

Relevant External Links for NT5CP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NT5CP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NT5CP1 Gene

Disorders for NT5CP1 Gene

No disorders were found for NT5CP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NT5CP1 Gene

Publications for NT5CP1 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for NT5CP1 Gene

Sources for NT5CP1 Gene

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