NRK Gene
protein-coding GIFtS : 52
GCID: GC0X P105067
Nik related kinase
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Aliasesfor NRK gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Nik Related Kinase 1 2 EC 2.7.11.13 8 NESK2 5 DKFZp686A171091 Nik-Related Protein Kinase2 EC 2.7.118
Export aliases for NRK gene to outside databases Previous GC identifers: GC0XP103839 GC0XP104872 GC0XP094691
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Summariesfor NRK gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for NRK : The mouse ortholog of this gene encodes a protein kinase required for JNK activation. The encoded protein may be involved in the induction of actin polymerization in late embryogenesis.(provided by RefSeq, Jun 2010) UniProtKB/Swiss-Prot: NRK_HUMAN, Q7Z2Y5 Function : May phosphorylate cofilin-1 and induce actin polymerization through this process, during the late stages ofembryogenesis. Involved in the TNF-alpha-induced signaling pathway (By similarity) Gene Wiki entry for NRK
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Genomic Viewsfor NRK gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000023.10 NC_018934.1 NT_011651.17 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the NRK gene promoter: AP-1 ATF-2 CREB AREB6 MZF-1 deltaCREB FOXO4 c-Jun Other transcription factors Search SABiosciences Chromatin IP Primers for NRK Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat NRK
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: Xq22.3 Ensembl cytogenetic band: Xq22.3 HGNC cytogenetic band: Xq22.3 NRK Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome X GeneLoc Exon Structure
GeneLoc location for GC0XP105067: view genomic region
(about GC identifiers )
Start:
105,066,536 bp from pter
End:
105,202,602 bp from pter
Size:
136,067 bases
Orientation:
plus strand
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Proteinsfor NRK gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: NRK_HUMAN, Q7Z2Y5 (See
protein sequence )Recommended Name: Nik-related protein kinase Size : 1582 amino acids; 178479 Da
Secondary accessions : Q32ND6 Q5H9K2 Q6ZMP2Alternative splicing : 3 isoforms : Q7Z2Y5-1 Q7Z2Y5-2 Q7Z2Y5-3 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for NRK: NX_Q7Z2Y5 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q7Z2Y5 4/6 DME Specific Peptides for NRK (Q7Z2Y5 ) (see all 6 )NRK Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_940867.2 ENSEMBL proteins: ENSP00000434830 ENSP00000438378 ENSP00000438785 ENSP00000438148 Human Recombinant Protein Products: NRK Antibody Products: Assay Products for NRK:
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Protein
Domains / Familiesfor NRK gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
NRK for domains About GeneDecksing 5/6 InterPro domains/families (see all 6 ):
Graphical View of Domain Structure for InterPro Entry Q7Z2Y5 ProtoNet protein and cluster: Q7Z2Y5
1 Blocks protein family : IPB001180 Citron-like UniProtKB/Swiss-Prot: NRK_HUMAN, Q7Z2Y5 Similarity : Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamilySimilarity : Contains 1 CNH domainSimilarity : Contains 1 protein kinase domain
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Functionfor NRK gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: NRK_HUMAN, Q7Z2Y5 Function : May phosphorylate cofilin-1 and induce actin polymerization through this process, during the late stages ofembryogenesis. Involved in the TNF-alpha-induced signaling pathway (By similarity) Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme Numbers (IUBMB): EC 2.7.11.1 1 2 EC 2.7.11 2
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NRK (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NRKOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): NRK (NM_017719 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NRK Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NRK
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NRK
Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0004674 protein serine/threonine kinase activity
IEA -- GO:0005083 small GTPase regulator activity
IEA -- GO:0005524 ATP binding
IEA -- GO:0016301 kinase activity
-- --
NRK for ontologies About GeneDecksing 3 GenomeRNAi human phenotypes for NRK :Animal Models: Mouse knock-out Nrk tm1Mkom for NRK 3 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Nrk) :
NRK for phenotypes About GeneDecksing
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Pathways & Interactionsfor NRK gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 TNF receptor signaling pathway
1 BioSystems Pathway for NRK Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for NRK 1 Interacting protein for NRK (Q7Z2Y5 3 ) via UniProtKB, MINT, STRING, and/or I2D About this table Gene Ontology (GO): 4 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0007256 activation of JNKK activity
-- -- GO:0007567 parturition
-- -- GO:0008285 negative regulation of cell proliferation
-- -- GO:0060721 regulation of spongiotrophoblast cell proliferation
-- --
NRK for ontologies About GeneDecksing
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Drugs & Compoundsfor NRK gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for NRK Search CenterWatch for drugs/clinical trials and news about NRK
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Transcriptsfor NRK gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for NRK gene: NM_198465.2 Unigene Cluster for NRK:
Nik related kinase Hs.209527 [show with all ESTs ] Unigene Representative Sequence: BX538345 4 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000243300 (uc004emd.3 uc011msi.2 ) ENST00000428173 (uc010npc.1 )ENST00000536164 ENST00000540278 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NRK (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NRKOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): NRK (NM_017719 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NRK Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NRK
Additional cDNA sequence: AK131549.1 AK293500.1 AK300377.1 BC108702.1 BX538345.1
5 DOTS entries : DT.114556 DT.97777096
DT.121320158 DT.121320173 DT.121320168 24/74 AceView cDNA sequences (see all 74 ):
AI803353 BQ771725 AW594026 AA992147 AI473381 AW102594 BM683045 AI280290 AW664774 AI016565 AK131549 BX108491 BQ774422 AI209073 BQ181298 AI016408 AI358516 AA779246 AA742454 AI917597 BF223049 BG571017 NM_198465 BX538345 GeneLoc Exon Structure
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Expression for NRK gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section NRK expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: --
About this image NRK expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See NRK Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for NRK SOURCE GeneReport for Unigene cluster: Hs.209527 SABiosciences Custom PCR Arrays for NRK Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NRKBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat NRK QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NRK QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NRK In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NRK
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Orthologsfor NRK gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for NRK gene from 7/24 species (see all 24 ) About this table
ENSEMBL Gene Tree for NRK (if available)TreeFam Gene Tree for NRK (if available)
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Paralogsfor NRK gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for NRK gene TAOK2 2 MAP4K5 2 TAOK3 2 TNIK 2 MAP4K2 2 MAP4K1 2 MAP4K3 2 MAP4K4 2 TAOK1 2 STK10 2 MINK1 2 SLK 2 18/21 SIMAP similar genes for NRK using alignment to 5 protein entries: NRK_HUMAN (see all proteins )
(see all similar genes ):PAK4 MYO3A STK24 MST4 STK4 MARK4 STK3 MAP4K4 MAP3K2 DKFZp686J1430 NEK6 RPS6KA2 STK11 STK25 MAP2K5 TNIK CDK4 MINK1
NRK for paralogs About GeneDecksing
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Genomic Variantsfor NRK gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr X pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for NRK (105066536 - 105202602 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 9 variations for NRK 1 CNV : 8310 8 Indels : 96878 103269 96881 96879 96880 83663 47760 42050 Locus Specific Mutation Databases (LSDB): NRK
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NRK
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Disorders
/ Diseasesfor NRK gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
NRK for disorders About GeneDecksing
OMIM gene information: 300791
OMIM disorders : --4 diseases for NRK : About MalaCards hyperinsulinemic hypoglycemia hypermobility syndrome sotos syndrome hypoglycemia 2 diseases from the University of Copenhagen DISEASES database for NRK :Hypermobility syndrome Sotos syndrome Export disorders for NRK gene to outside databases
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Publicationsfor NRK gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for NRK gene, integrated from 9 sources (see all 14 ): (articles sorted by number of sources associating them with NRK) Utopia : connect your pdf to the dynamic world of online information
The DNA sequence of the human X chromosome. (PubMed id 15772651) 1 , 2 Ross M.T.... Bentley D.R. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692) 2 Rigbolt K.T....Blagoev B. (2011) Patterns of somatic mutation in human cancer genomes. (PubMed id 17344846) 2 Greenman C.... Stratton M.R. (2007) The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005) 2 Bechtel S.... Schupp I. (2007) The LIFEdb database in 2006. (PubMed id 16381901) 1 Mehrle A....Wiemann S. (2006) From ORFeome to biology: a functional genomics pipeline. (PubMed id 15489336) 1 Wiemann S....Poustka A. (2004) Cofilin phosphorylation and actin polymerization by NRK/NESK, a member of the germinal center kinase family. (PubMed id 12837278) 1 Nakano K.... Kitamura N. (2003) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for NRK gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing NRK gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing NRK gene
(According to HUGE )
About This Section --
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Specialized Databases showing NRK gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for NRK Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for NRK gene: Search GeneIP for patents involving NRK GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor NRK gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for NRK OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for NRK OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NRK Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for NRK OriGene 3'-UTR Clone for NRK OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NRK OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NRK Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for NRK OriGene Custom Protein Services for NRK OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat NRK QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NRK QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat NRK QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat NRK QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NRK QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NRK
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NRK Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NRK
Search ThermoFisher Antibodies for NRK
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NRK
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