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Aliases for NRK Gene

Aliases for NRK Gene

  • Nik Related Kinase 2 3 5
  • EC 2.7.11.1 4 61
  • Nik-Related Protein Kinase 3
  • EC 2.7.11 61
  • NESK 3

External Ids for NRK Gene

Previous GeneCards Identifiers for NRK Gene

  • GC0XP103839
  • GC0XP104872
  • GC0XP105067
  • GC0XP094691

Summaries for NRK Gene

Entrez Gene Summary for NRK Gene

  • The mouse ortholog of this gene encodes a protein kinase required for JNK activation. The encoded protein may be involved in the induction of actin polymerization in late embryogenesis.[provided by RefSeq, Jun 2010]

GeneCards Summary for NRK Gene

NRK (Nik Related Kinase) is a Protein Coding gene. Diseases associated with NRK include Sotos Syndrome 1. Among its related pathways are TNF signaling (REACTOME). GO annotations related to this gene include transferase activity, transferring phosphorus-containing groups and protein tyrosine kinase activity. An important paralog of this gene is TNIK.

UniProtKB/Swiss-Prot for NRK Gene

  • May phosphorylate cofilin-1 and induce actin polymerization through this process, during the late stages of embryogenesis. Involved in the TNF-alpha-induced signaling pathway (By similarity).

Gene Wiki entry for NRK Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NRK Gene

Genomics for NRK Gene

Regulatory Elements for NRK Gene

Enhancers for NRK Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around NRK on UCSC Golden Path with GeneCards custom track

Promoters for NRK Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around NRK on UCSC Golden Path with GeneCards custom track

Genomic Location for NRK Gene

Chromosome:
X
Start:
105,821,856 bp from pter
End:
105,958,612 bp from pter
Size:
136,757 bases
Orientation:
Plus strand

Genomic View for NRK Gene

Genes around NRK on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NRK Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NRK Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NRK Gene

Proteins for NRK Gene

  • Protein details for NRK Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z2Y5-NRK_HUMAN
    Recommended name:
    Nik-related protein kinase
    Protein Accession:
    Q7Z2Y5
    Secondary Accessions:
    • Q32ND6
    • Q5H9K2
    • Q6ZMP2

    Protein attributes for NRK Gene

    Size:
    1582 amino acids
    Molecular mass:
    178479 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for NRK Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NRK Gene

Selected DME Specific Peptides for NRK Gene

Post-translational modifications for NRK Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for NRK Gene

Domains & Families for NRK Gene

Gene Families for NRK Gene

Protein Domains for NRK Gene

Graphical View of Domain Structure for InterPro Entry

Q7Z2Y5

UniProtKB/Swiss-Prot:

NRK_HUMAN :
  • Contains 1 CNH domain.
  • Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
Domain:
  • Contains 1 CNH domain.
  • Contains 1 protein kinase domain.
Family:
  • Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
genes like me logo Genes that share domains with NRK: view

Function for NRK Gene

Molecular function for NRK Gene

UniProtKB/Swiss-Prot CatalyticActivity:
ATP + a protein = ADP + a phosphoprotein.
UniProtKB/Swiss-Prot Function:
May phosphorylate cofilin-1 and induce actin polymerization through this process, during the late stages of embryogenesis. Involved in the TNF-alpha-induced signaling pathway (By similarity).

Enzyme Numbers (IUBMB) for NRK Gene

Gene Ontology (GO) - Molecular Function for NRK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004702 receptor signaling protein serine/threonine kinase activity IBA --
GO:0005524 ATP binding IEA --
genes like me logo Genes that share ontologies with NRK: view
genes like me logo Genes that share phenotypes with NRK: view

Animal Models for NRK Gene

MGI Knock Outs for NRK:

Animal Model Products

CRISPR Products

miRNA for NRK Gene

miRTarBase miRNAs that target NRK

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for NRK Gene

Localization for NRK Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NRK Gene COMPARTMENTS Subcellular localization image for NRK gene
Compartment Confidence
cytosol 3
nucleus 2

Gene Ontology (GO) - Cellular Components for NRK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
genes like me logo Genes that share ontologies with NRK: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for NRK Gene

Pathways & Interactions for NRK Gene

SuperPathways for NRK Gene

Superpath Contained pathways
1 TNF signaling (REACTOME)
genes like me logo Genes that share pathways with NRK: view

Pathways by source for NRK Gene

1 BioSystems pathway for NRK Gene

Gene Ontology (GO) - Biological Process for NRK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007256 activation of JNKK activity IEA --
GO:0007567 parturition IEA --
GO:0008285 negative regulation of cell proliferation IEA --
GO:0060721 regulation of spongiotrophoblast cell proliferation IEA --
genes like me logo Genes that share ontologies with NRK: view

No data available for SIGNOR curated interactions for NRK Gene

Drugs & Compounds for NRK Gene

No Compound Related Data Available

Transcripts for NRK Gene

Unigene Clusters for NRK Gene

Nik related kinase:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NRK Gene

No ASD Table

Relevant External Links for NRK Gene

GeneLoc Exon Structure for
NRK
ECgene alternative splicing isoforms for
NRK

Expression for NRK Gene

mRNA expression in normal human tissues for NRK Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for NRK Gene

This gene is overexpressed in Ovary (x16.2) and Adrenal Gland (x10.2).

Protein differential expression in normal tissues from HIPED for NRK Gene

This gene is overexpressed in Plasma (57.9) and Placenta (7.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for NRK Gene



Protein tissue co-expression partners for NRK Gene

NURSA nuclear receptor signaling pathways regulating expression of NRK Gene:

NRK

SOURCE GeneReport for Unigene cluster for NRK Gene:

Hs.209527
genes like me logo Genes that share expression patterns with NRK: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt for NRK Gene

Orthologs for NRK Gene

This gene was present in the common ancestor of chordates.

Orthologs for NRK Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia NRK 34
  • 89.26 (n)
  • 86.08 (a)
NRK 35
  • 80 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NRK 34
  • 90.42 (n)
  • 88.49 (a)
NRK 35
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Nrk 34
  • 79.03 (n)
  • 71.03 (a)
Nrk 16
Nrk 35
  • 70 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia NRK 34
  • 99.55 (n)
  • 99.33 (a)
NRK 35
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nrk 34
  • 76.46 (n)
  • 64.08 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 18 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia NRK 35
  • 19 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii si:dkey-81j8.6 35
  • 16 (a)
ManyToMany
Species where no ortholog for NRK was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NRK Gene

ENSEMBL:
Gene Tree for NRK (if available)
TreeFam:
Gene Tree for NRK (if available)

Paralogs for NRK Gene

genes like me logo Genes that share paralogs with NRK: view

Variants for NRK Gene

Sequence variations from dbSNP and Humsavar for NRK Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs209373 - 105,908,290(+) ACACC(A/G)TGAGA reference, missense
rs16984889 - 105,924,697(+) CAGGG(A/C/G)AAGCT reference, missense
rs55862725 - 105,908,283(+) GAACA(C/G)TACAC reference, missense
VAR_040952 A breast infiltrating ductal carcinoma sample
rs55635933 - 105,908,917(+) GTGCA(C/G/T)CTAAG reference, missense

Structural Variations from Database of Genomic Variants (DGV) for NRK Gene

Variant ID Type Subtype PubMed ID
esv2140378 CNV deletion 18987734
esv2482028 CNV deletion 19546169
esv2636339 CNV deletion 19546169
esv2660063 CNV deletion 23128226
esv2676289 CNV deletion 23128226
esv2740368 CNV deletion 23290073
esv2752312 CNV gain 17911159
esv3559168 CNV deletion 23714750
esv4419 CNV loss 18987735
nsv1124512 CNV deletion 24896259
nsv1141075 CNV deletion 24896259
nsv521259 CNV gain 19592680

Variation tolerance for NRK Gene

Residual Variation Intolerance Score: 66.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 9.15; 87.85% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for NRK Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NRK

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NRK Gene

Disorders for NRK Gene

MalaCards: The human disease database

(1) MalaCards diseases for NRK Gene - From: DISEASES

Disorder Aliases PubMed IDs
sotos syndrome 1
  • sotos syndrome
- elite association - COSMIC cancer census association via MalaCards
Search NRK in MalaCards View complete list of genes associated with diseases

Relevant External Links for NRK

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NRK
genes like me logo Genes that share disorders with NRK: view

No data available for UniProtKB/Swiss-Prot and Genatlas for NRK Gene

Publications for NRK Gene

  1. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4 65
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 65
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 65
  4. System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PMID: 21406692) Rigbolt K.T. … Blagoev B. (Sci. Signal. 2011) 4 65
  5. Patterns of somatic mutation in human cancer genomes. (PMID: 17344846) Greenman C. … Stratton M.R. (Nature 2007) 4 65

Products for NRK Gene

Sources for NRK Gene

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