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Aliases for NRAV Gene

Subcategory (RNA class) for NRAV Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NRAV Gene

  • Negative Regulator Of Antiviral Response (Non-Protein Coding) 2 3 5
  • DYNLL1 Antisense RNA 1 2 3
  • DYNLL1-AS1 3
  • DYNLL1AS1 3

External Ids for NRAV Gene

Previous HGNC Symbols for NRAV Gene

  • DYNLL1-AS1

Summaries for NRAV Gene

GeneCards Summary for NRAV Gene

NRAV (Negative Regulator Of Antiviral Response (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NRAV Gene

Genomics for NRAV Gene

Regulatory Elements for NRAV Gene

Enhancers for NRAV Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F120549 1.2 Ensembl ENCODE 11.2 -54.6 -54566 1.4 PKNOX1 ATF1 ARID4B YBX1 YY1 SLC30A9 SP5 PPARG KAT8 MIER3 COQ5 GATC COX6A1 RPL29P24 NRAV DYNLL1 SRSF9 RPL31P52 TRIAP1 ENSG00000111780
GH12F120473 1.1 Ensembl ENCODE 11.9 +21.3 21279 2.0 PKNOX1 SIN3A ZNF121 ZNF366 RCOR1 FOS CREM EGR2 ZNF263 ZNF362 COQ5 RPL31P52 TRIAP1 ENSG00000111780 NRAV COX6A1 PLA2G1B DYNLL1
GH12F120494 1.1 ENCODE 0.8 -0.7 -655 3.5 ARID4B SIN3A DMAP1 ZNF143 FOS SP3 NFYC MXD4 REST KAT8 COQ5 GATC DYNLL1 GCN1 RPL29P24 RNF10 C12orf43 NME2P1 SRSF9 RPL31P52
GH12F120487 0.9 ENCODE 0.4 +7.9 7871 1.2 HDAC1 PKNOX1 KLF17 ZNF335 ZNF366 GATA2 FOS EGR2 ZEB2 MBD2 GATC COQ5 RPL31P52 TRIAP1 ENSG00000111780 COX6A1 NRAV DYNLL1
GH12F120489 0.7 ENCODE 0.4 +6.7 6714 0.2 KLF1 ATF1 JUN ZNF366 ZNF600 ZEB2 TSHZ1 ATF2 JUND ZNF692 RPL31P52 TRIAP1 ENSG00000111780 COX6A1 NRAV DYNLL1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NRAV on UCSC Golden Path with GeneCards custom track

Promoters for NRAV Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000091410 -454 2801 ARID4B SIN3A DMAP1 ZNF143 FOS SP3 NFYC MXD4 REST KAT8

Genomic Location for NRAV Gene

Chromosome:
12
Start:
120,490,328 bp from pter
End:
120,495,946 bp from pter
Size:
5,619 bases
Orientation:
Minus strand

Genomic View for NRAV Gene

Genes around NRAV on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NRAV Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NRAV Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NRAV Gene

Proteins for NRAV Gene

Post-translational modifications for NRAV Gene

No Post-translational modifications

No data available for DME Specific Peptides for NRAV Gene

Domains & Families for NRAV Gene

Gene Families for NRAV Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NRAV: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NRAV Gene

Function for NRAV Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NRAV Gene

Localization for NRAV Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NRAV Gene

Pathways & Interactions for NRAV Gene

No Data Available

Interacting Proteins for NRAV Gene

Gene Ontology (GO) - Biological Process for NRAV Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NRAV Gene

Transcripts for NRAV Gene

mRNA/cDNA for NRAV Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NRAV Gene

No ASD Table

Relevant External Links for NRAV Gene

GeneLoc Exon Structure for
NRAV
ECgene alternative splicing isoforms for
NRAV

Expression for NRAV Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NRAV Gene

NURSA nuclear receptor signaling pathways regulating expression of NRAV Gene:

NRAV
genes like me logo Genes that share expression patterns with NRAV: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NRAV Gene

Orthologs for NRAV Gene

Evolution for NRAV Gene

ENSEMBL:
Gene Tree for NRAV (if available)
TreeFam:
Gene Tree for NRAV (if available)

No data available for Orthologs for NRAV Gene

Paralogs for NRAV Gene

No data available for Paralogs for NRAV Gene

Variants for NRAV Gene

Sequence variations from dbSNP and Humsavar for NRAV Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs10774551 -- 120,490,023(+) GATTA(C/T)AGGCG intron-variant, downstream-variant-500B
rs10789 -- 120,491,339(+) CTCCA(A/C)TGCCA intron-variant, nc-transcript-variant
rs11065140 -- 120,491,738(+) CCTGG(A/G)AAAGT intron-variant, nc-transcript-variant
rs11065141 -- 120,493,775(+) CCCGG(C/G)TAATT intron-variant
rs11065142 -- 120,493,953(+) TTACT(A/G)TATTA intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for NRAV Gene

Variant ID Type Subtype PubMed ID
nsv509482 CNV insertion 20534489

Relevant External Links for NRAV Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NRAV

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NRAV Gene

Disorders for NRAV Gene

Relevant External Links for NRAV

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NRAV

No disorders were found for NRAV Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NRAV Gene

Publications for NRAV Gene

  1. NRAV, a long noncoding RNA, modulates antiviral responses through suppression of interferon-stimulated gene transcription. (PMID: 25525793) Ouyang J. … Chen J.L. (Cell Host Microbe 2014) 2 3 64
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for NRAV Gene

Sources for NRAV Gene

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