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Aliases for NRADDP Gene

Aliases for NRADDP Gene

  • Neurotrophin Receptor Associated Death Domain, Pseudogene 2 3 5

External Ids for NRADDP Gene

Summaries for NRADDP Gene

Entrez Gene Summary for NRADDP Gene

  • The neurotrophin receptor alike death domain proteins belong to the death domain superfamily and are involved in mediating apoptosis. This gene has been inactivated by mutation and is nonfunctional in humans. [provided by RefSeq, Oct 2008]

GeneCards Summary for NRADDP Gene

NRADDP (Neurotrophin Receptor Associated Death Domain, Pseudogene) is a Pseudogene.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NRADDP Gene

Genomics for NRADDP Gene

Regulatory Elements for NRADDP Gene

Enhancers for NRADDP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G047008 1.3 Ensembl ENCODE dbSUPER 0.7 -1.8 -1809 2.3 HDGF PKNOX1 SIN3A RAD21 ETS1 GLIS2 ZNF207 EGR2 SP3 GATAD2B NBEAL2 CCDC12 KIF9 KLHL18 NRADDP
GH03G046984 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -23.4 -23395 7.6 HDGF PKNOX1 CREB3L1 ARNT SIN3A CBX5 ZNF143 ZNF207 FOS KLF13 CCDC12 NBEAL2 BOLA2P2 XCR1 SMARCC1 PTH1R KLHL18 NRADDP
GH03G047016 1.2 ENCODE dbSUPER 0.4 +6.5 6509 3.9 PKNOX1 FOXA2 ATF1 ARNT FEZF1 YY1 TCF12 ZNF121 ZNF766 JUNB NBEAL2 PTH1R CCDC12 MYL3 PRSS45 PRSS50 NRADDP MRPL57P3
GH03G046998 1.1 ENCODE dbSUPER 0.4 -12.8 -12817 0.2 HDGF ATF1 RB1 ARID4B ZNF2 ZNF48 RAD21 RARA CBX5 ZNF143 NRADDP CCDC12
GH03G046996 0.7 dbSUPER 0.4 -14.3 -14289 1.3 MTA2 BHLHE40 NR4A1 MAFG TBX21 ZFHX2 NFIC ZNF316 GLIS2 POLR2A PTH1R NRADDP CCDC12
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NRADDP on UCSC Golden Path with GeneCards custom track

Genomic Location for NRADDP Gene

Chromosome:
3
Start:
47,011,542 bp from pter
End:
47,013,467 bp from pter
Size:
1,926 bases
Orientation:
Plus strand

Genomic View for NRADDP Gene

Genes around NRADDP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NRADDP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NRADDP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NRADDP Gene

Proteins for NRADDP Gene

Post-translational modifications for NRADDP Gene

No Post-translational modifications

No data available for DME Specific Peptides for NRADDP Gene

Domains & Families for NRADDP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NRADDP Gene

Function for NRADDP Gene

Animal Model Products

  • Taconic Biosciences Mouse Models for NRADDP

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NRADDP Gene

Localization for NRADDP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NRADDP Gene

Pathways & Interactions for NRADDP Gene

SuperPathways for NRADDP Gene

No Data Available

Interacting Proteins for NRADDP Gene

Gene Ontology (GO) - Biological Process for NRADDP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NRADDP Gene

Drugs & Compounds for NRADDP Gene

No Compound Related Data Available

Transcripts for NRADDP Gene

mRNA/cDNA for NRADDP Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NRADDP Gene

Neurotrophin receptor associated death domain, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NRADDP Gene

No ASD Table

Relevant External Links for NRADDP Gene

GeneLoc Exon Structure for
NRADDP
ECgene alternative splicing isoforms for
NRADDP

Expression for NRADDP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NRADDP Gene

mRNA differential expression in normal tissues according to GTEx for NRADDP Gene

This gene is overexpressed in Whole Blood (x8.2), Skin - Not Sun Exposed (Suprapubic) (x5.3), and Esophagus - Mucosa (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of NRADDP Gene:

NRADDP

SOURCE GeneReport for Unigene cluster for NRADDP Gene:

Hs.201522
genes like me logo Genes that share expression patterns with NRADDP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NRADDP Gene

Orthologs for NRADDP Gene

Evolution for NRADDP Gene

ENSEMBL:
Gene Tree for NRADDP (if available)
TreeFam:
Gene Tree for NRADDP (if available)

No data available for Orthologs for NRADDP Gene

Paralogs for NRADDP Gene

No data available for Paralogs for NRADDP Gene

Variants for NRADDP Gene

Sequence variations from dbSNP and Humsavar for NRADDP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs886058610 Uncertain significance 47,009,564(+) CAGCA(C/G)TTTTT nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs886058611 Uncertain significance 47,009,583(+) TGGGG(C/T)GGGGT nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs1000289162 -- 47,012,663(+) AAGCT(C/T)GAACT nc-transcript-variant
rs1002004126 -- 47,009,578(+) CAGTC(C/T)GGGGC nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs1003497539 -- 47,013,877(+) CTATG(A/T)GCAGC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for NRADDP Gene

Variant ID Type Subtype PubMed ID
esv3596073 CNV loss 21293372
nsv428417 CNV loss 18775914
nsv954479 CNV deletion 24416366
nsv997261 CNV gain 25217958

Relevant External Links for NRADDP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NRADDP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NRADDP Gene

Disorders for NRADDP Gene

Relevant External Links for NRADDP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NRADDP

No disorders were found for NRADDP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NRADDP Gene

Publications for NRADDP Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 2 3 64
  2. Comparative genomics search for losses of long-established genes on the human lineage. (PMID: 18085818) Zhu J. … Haussler D. (PLoS Comput. Biol. 2007) 2 3 64
  3. NRADD, a novel membrane protein with a death domain involved in mediating apoptosis in response to ER stress. (PMID: 12728256) Wang X. … Vincenz C. (Cell Death Differ. 2003) 3 64
  4. PLAIDD, a type II death domain protein that interacts with p75 neurotrophin receptor. (PMID: 12095158) Frankowski H. … Bredesen D.E. (Neuromolecular Med. 2002) 3 64

Products for NRADDP Gene

Sources for NRADDP Gene

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