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Aliases for NRADDP Gene

Aliases for NRADDP Gene

  • Neurotrophin Receptor Associated Death Domain, Pseudogene 2 3 5

External Ids for NRADDP Gene

Summaries for NRADDP Gene

Entrez Gene Summary for NRADDP Gene

  • The neurotrophin receptor alike death domain proteins belong to the death domain superfamily and are involved in mediating apoptosis. This gene has been inactivated by mutation and is nonfunctional in humans. [provided by RefSeq, Oct 2008]

GeneCards Summary for NRADDP Gene

NRADDP (Neurotrophin Receptor Associated Death Domain, Pseudogene) is a Pseudogene.

Additional gene information for NRADDP Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NRADDP Gene

Genomics for NRADDP Gene

GeneHancer (GH) Regulatory Elements for NRADDP Gene

Promoters and enhancers for NRADDP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I047008 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 -1.1 -1090 2.3 CTCF HDGF PKNOX1 MAX EBF1 ZIC2 RAD21 ETS1 HIC1 ZFHX2 NRADDP NBEAL2 CCDC12 KIF9 KLHL18
GH03I046984 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -22.7 -22677 7.6 HDGF PKNOX1 SMAD1 ARNT POLR2B CBX5 E2F8 ZNF207 ZNF143 REST SETD2 NBEAL2 PTPN23 CCDC12 BOLA2P2 PTH1R KLHL18 NRADDP
GH03I047016 Enhancer 1.1 ENCODE dbSUPER 0.4 +7.2 7226 3.9 ATF1 PKNOX1 FOXA2 ARNT FEZF1 YY1 TCF12 ZNF766 ATF7 RUNX3 NBEAL2 PTH1R CCDC12 MYL3 PRSS45 PRSS50 NRADDP MRPL57P3 SETD2
GH03I046998 Enhancer 1 ENCODE dbSUPER 0.4 -12.1 -12098 0.2 HDGF ATF1 RB1 ARID4B SIN3A ZNF2 ZNF48 RAD21 RFX5 RARA NRADDP CCDC12 NBEAL2
GH03I046996 Enhancer 0.6 dbSUPER 0.4 -13.6 -13570 1.3 MAFG ZNF316 GLIS2 NFIC ZFHX2 POLR2A EMSY MAFK SUPT5H PTH1R NRADDP CCDC12 NBEAL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NRADDP on UCSC Golden Path with GeneCards custom track

Genomic Locations for NRADDP Gene

Genomic Locations for NRADDP Gene
chr3:47,010,824-47,013,467
(GRCh38/hg38)
Size:
2,644 bases
Orientation:
Plus strand
chr3:47,053,032-47,054,957
(GRCh37/hg19)

Genomic View for NRADDP Gene

Genes around NRADDP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NRADDP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NRADDP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NRADDP Gene

Proteins for NRADDP Gene

Post-translational modifications for NRADDP Gene

No Post-translational modifications

No data available for DME Specific Peptides for NRADDP Gene

Domains & Families for NRADDP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NRADDP Gene

Function for NRADDP Gene

Phenotypes From GWAS Catalog for NRADDP Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NRADDP Gene

Localization for NRADDP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NRADDP Gene

Pathways & Interactions for NRADDP Gene

SuperPathways for NRADDP Gene

No Data Available

Interacting Proteins for NRADDP Gene

Gene Ontology (GO) - Biological Process for NRADDP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NRADDP Gene

Drugs & Compounds for NRADDP Gene

No Compound Related Data Available

Transcripts for NRADDP Gene

mRNA/cDNA for NRADDP Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NRADDP Gene

Neurotrophin receptor associated death domain, pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NRADDP Gene

No ASD Table

Relevant External Links for NRADDP Gene

GeneLoc Exon Structure for
NRADDP
ECgene alternative splicing isoforms for
NRADDP

Expression for NRADDP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NRADDP Gene

mRNA differential expression in normal tissues according to GTEx for NRADDP Gene

This gene is overexpressed in Whole Blood (x8.2), Skin - Not Sun Exposed (Suprapubic) (x5.3), and Esophagus - Mucosa (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of NRADDP Gene:

NRADDP

SOURCE GeneReport for Unigene cluster for NRADDP Gene:

Hs.201522
genes like me logo Genes that share expression patterns with NRADDP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NRADDP Gene

Orthologs for NRADDP Gene

Evolution for NRADDP Gene

ENSEMBL:
Gene Tree for NRADDP (if available)
TreeFam:
Gene Tree for NRADDP (if available)

No data available for Orthologs for NRADDP Gene

Paralogs for NRADDP Gene

No data available for Paralogs for NRADDP Gene

Variants for NRADDP Gene

Sequence variations from dbSNP and Humsavar for NRADDP Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1033448931 uncertain-significance, Gray platelet syndrome 47,009,583(+) C/T upstream_transcript_variant
rs906422324 uncertain-significance, Gray platelet syndrome 47,009,564(+) C/G upstream_transcript_variant
rs1000289162 -- 47,012,663(+) C/T non_coding_transcript_variant
rs1002004126 -- 47,009,578(+) T/C upstream_transcript_variant
rs1003497539 -- 47,013,877(+) A/T downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for NRADDP Gene

Variant ID Type Subtype PubMed ID
esv3596073 CNV loss 21293372
nsv428417 CNV loss 18775914
nsv954479 CNV deletion 24416366
nsv997261 CNV gain 25217958

Additional Variant Information for NRADDP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NRADDP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NRADDP Gene

Disorders for NRADDP Gene

Additional Disease Information for NRADDP

No disorders were found for NRADDP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NRADDP Gene

Publications for NRADDP Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 2 3 58
  2. Comparative genomics search for losses of long-established genes on the human lineage. (PMID: 18085818) Zhu J … Haussler D (PLoS computational biology 2007) 2 3 58
  3. NRADD, a novel membrane protein with a death domain involved in mediating apoptosis in response to ER stress. (PMID: 12728256) Wang X … Vincenz C (Cell death and differentiation 2003) 3 58
  4. PLAIDD, a type II death domain protein that interacts with p75 neurotrophin receptor. (PMID: 12095158) Frankowski H … Bredesen DE (Neuromolecular medicine 2002) 3 58

Products for NRADDP Gene

Sources for NRADDP Gene

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