NR3C1 Gene
protein-coding GIFtS : 71
GCID: GC05 M142639
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid... (Previous names: nuclear receptor subfamily 3, group C, member 1 ) (Previous symbol: GRL )
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Aliasesfor NR3C1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Nuclear Receptor Subfamily 3, Group C, Member 1 (GlucocorticoidReceptor) 1 2 GCCR2 GRL1 2 3 5 Glucocorticoid Nuclear Receptor Variant 12 GR1 2 3 Glucocorticoid Receptor2 GCR2 5 Nuclear Receptor Subfamily 3 Group C Member 13 Nuclear Receptor Subfamily 3, Group C, Member 11
Export aliases for NR3C1 gene to outside databases Previous GC identifers: GC05M142559 GC05M143241 GC05M142687 GC05M137804
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Summariesfor NR3C1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for NR3C1 : This gene encodes glucocorticoid receptor, which can function both as a transcription factor that binds to glucocorticoid response elements in the promoters of glucocorticoid responsive genes to activate their transcription, and as a regulator of other transcription factors. This receptor is typically found in the cytoplasm, but upon ligand binding, is transported into the nucleus. It is involved in inflammatory responses, cellular proliferation, and differentiation in target tissues. Mutations in this gene are associated with generalized glucocorticoid resistance. Alternative splicing of this gene results in transcript variants encoding either the same or different isoforms. Additional isoforms resulting from the use of alternate in-frame translation initiation sites have also been described, and shown to be functional, displaying diverse cytoplasm-to-nucleus trafficking patterns and distinct transcriptional activities (PMID:15866175). (provided by RefSeq, Feb 2011) UniProtKB/Swiss-Prot: GCR_HUMAN, P04150 Function : Receptor for glucocorticoids (GC). Has a dual mode of action: as a transcription factor that binds toglucocorticoid response elements (GRE), both for nuclear and mitochondrial DNA, and as a modulator of other transcription factors. Affects inflammatory responses, cellular proliferation and differentiation in target tissues. Could act as a coactivator for STAT5-dependent transcription upon growth hormone (GH) stimulation and could reveal an essential role of hepatic GR in the control of body growth. Involved in chromatin remodeling. Plays a significant role in transactivation summary
for NR3C1 : Glucocorticoid receptors (GRs) are nuclear hormone receptors of the NR3C class, which also includesmineralocorticoid, progesterone and androgen receptors. They exist as homodimers coupled to Hsp90 or HMGBproteins, which are shed upon activation. The major signaling pathway used by GRs is via direct DNA bindingand transcriptional regulation of target genes. They can also signal by binding to other proteins, mainlywith transcription factors such as NF-kappaB, AP-1 or STAT. GRs are ubiquitously expressed and mediate avast array of physiological functions. Glucocorticoids regulate carbohydrate, protein and fat metabolism,modulate immune responses through supression of chemokine and cytokine production and have critical roles inconstitutive activity of the CNS, digestive, hematopoietic, renal and reproductive systems. The human geneencoding the glucocorticoid receptor has been localized to 5q31-q32. Gene Wiki entry for NR3C1 (Glucocorticoid receptor)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Viewsfor NR3C1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000005.9 NC_018916.1 NT_029289.11 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the NR3C1 gene promoter: AP-1 Other transcription factors Search SABiosciences Chromatin IP Primers for NR3C1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat NR3C1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 5q31.3 Ensembl cytogenetic band: 5q31.3 HGNC cytogenetic band: 5q31-q32 NR3C1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 5 GeneLoc Exon Structure
GeneLoc location for GC05M142639: view genomic region
(about GC identifiers )
Start:
142,657,496 bp from pter
End:
142,815,077 bp from pter
Size:
157,582 bases
Orientation:
minus strand
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Proteinsfor NR3C1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: GCR_HUMAN, P04150 (See
protein sequence )Recommended Name: Glucocorticoid receptor Size : 777 amino acids; 85659 Da
Subunit : Heteromultimeric cytoplasmic complex with HSP90, HSP70, and FKBP5 or another immunophilin, or the immunophilinhomolog PPP5C. Directly interacts with UNC45A. Upon ligand binding FKBP5 dissociates from the complex and FKBP4 takes its place, thereby linking the complex to dynein and mediating transport to the nucleus, where the complex dissociates (By similarity). Binds to DNA as a homodimer, and as a heterodimer with NR3C2 or the retinoid X receptor. Binds STAT5A and STAT5B homodimers and heterodimers. Interacts with NRIP1, POU2F1, POU2F2 and TRIM28. Interacts with NCOA1, NCOA3, SMARCA4, SMARCC1, SMARCD1, and SMARCE1 (By similarity). Interacts with several coactivator complexes, including the SMARCA4 complex, CREBBP/EP300, TADA2L and p160 coactivators such as NCOA2 and NCOA6. Interaction with BAG1 inhibits transactivation. Interacts with HEXIM1, PELP1 and TGFB1I1
Subcellular location : Cytoplasm. Mitochondrion. Nucleus. Note=Cytoplasmic in the absence of ligand, nuclear afterligand-binding
Subcellular location : Isoform Beta: Nucleus. Note=Localized largely in the nucleus
Miscellaneous : High constitutive expression of isoform beta by neutrophils may provide a mechanism by which these cellsescape glucocorticoid-induced cell death. Up-regulation by proinflammatory cytokines such as IL8 further enhances their survival in the presence of glucocorticoids during inflammation
Miscellaneous : Can up- or down-modulate aggregation and nuclear localization of expanded polyglutamine polypeptidesderived from AR and HD through specific regulation of gene expression. Aggregation and nuclear localization of expanded polyglutamine proteins are regulated cellular processes that can be modulated by this receptor, a well-characterized transcriptional regulator
6/11 PDB 3D structures from and Proteopedia for NR3C1 (see all 11 ):1M2Z (3D)
  1NHZ (3D)
  1P93 (3D)
  3BQD (3D)
  3CLD (3D)
  3E7C (3D)
 
Secondary accessions : A0ZXF9 B0LPG8 D3DQF4 P04151 Q53EP5 Q6N0A4Alternative splicing, Alternative initiation : 10 isoforms : P04150-1 P04150-2 P04150-3 P04150-6 P04150-5 P04150-7 P04150-4 P04150-8 P04150-9 P04150-10 (Produced by alternative initiation at Met-27 of isoform Beta)Explore the universe of human proteins at neXtProt for NR3C1: NX_P04150 Post-translational modifications:
Increased proteasome-mediated degradation in response to glucocorticoids1
Phosphorylated in the absence of hormone; becomes hyperphosphorylated in the presence of glucocorticoid. The Ser-203-phosphorylated form is mainly cytoplasmic, and the Ser-211-phosphorylated form is nuclear. Transcriptional activity correlates with the amount of phosphorylation at Ser-2111
Sumoylated; this reduces transcription transactivation1
Ubiquitinated; restricts glucocorticoid-mediated transcriptional signaling (By similarity)1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P04150 NR3C1 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (15 alternative transcripts):
NP_000167.1 NP_001018084.1 NP_001018085.1 NP_001018086.1 NP_001018087.1 NP_001018661.1 NP_001019265.1 NP_001191187.1 NP_001191188.1 NP_001191189.1 NP_001191190.1 NP_001191191.1 NP_001191192.1 NP_001191193.1 NP_001191194.1 ENSEMBL proteins: ENSP00000377977 ENSP00000387672 ENSP00000422518 ENSP00000377979 ENSP00000231509 ENSP00000427672 ENSP00000424747 ENSP00000425313 ENSP00000420856 ENSP00000426478 ENSP00000425374 ENSP00000343205 ENSP00000405282 ENSP00000404218 Reactome Protein details: P04150 Human Recombinant Protein Products: Gene Ontology (GO): 5/12 cellular component terms (GO ID links to tree view) (see all 12 ): About this table
NR3C1 for ontologies About GeneDecksing NR3C1 Antibody Products: Assay Products for NR3C1:
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Protein
Domains / Familiesfor NR3C1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
NR3C1 for domains About GeneDecksing 5/6 InterPro domains/families (see all 6 ):
Graphical View of Domain Structure for InterPro Entry P04150 ProtoNet protein and cluster: P04150
2 Blocks protein families : IPB001409 Glucocorticoid receptor signature IPB001723 Steroid hormone receptor signature UniProtKB/Swiss-Prot: GCR_HUMAN, P04150 Domain : Composed of three domains: a modulating N-terminal domain, a DNA-binding domain and a C-terminal ligand-bindingdomain Similarity : Belongs to the nuclear hormone receptor family. NR3 subfamilySimilarity : Contains 1 nuclear receptor DNA-binding domain
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Functionfor NR3C1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: GCR_HUMAN, P04150 Function : Receptor for glucocorticoids (GC). Has a dual mode of action: as a transcription factor that binds toglucocorticoid response elements (GRE), both for nuclear and mitochondrial DNA, and as a modulator of other transcription factors. Affects inflammatory responses, cellular proliferation and differentiation in target tissues. Could act as a coactivator for STAT5-dependent transcription upon growth hormone (GH) stimulation and could reveal an essential role of hepatic GR in the control of body growth. Involved in chromatin remodeling. Plays a significant role in transactivation
Genatlas biochemistry entry for NR3C1 : nuclear recptor subafamily 3,group C,member 1,steroid/thyroid hormone receptor superfamily,interacting with tissue-specific transcriptional activators required for receptor actin (see HNFS) Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NR3C1 (see all 9 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NR3C1 (see all 7 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 15 ): NR3C1 (NM_001024094 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NR3C1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NR3C1
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NR3C1
Gene Ontology (GO): 5/19 molecular function terms (GO ID links to tree view) (see all 19 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0003677 DNA binding
-- -- GO:0003682 chromatin binding
-- -- GO:0003690 double-stranded DNA binding
-- -- GO:0003700 sequence-specific DNA binding transcription factor activity
IEA -- GO:0003707 steroid hormone receptor activity
-- --
NR3C1 for ontologies About GeneDecksing 2 GenomeRNAi human phenotypes for NR3C1 :Animal Models: Mouse knock-outs for NR3C1: Nr3c1 tm1Ljm Nr3c1 tm1Gsc Nr3c1 tm2.1Gsc 15/20 MGI mutant phenotypes (inferred from 12 alleles ) (MGI details for Nr3c1) (see all 20 ):
NR3C1 for phenotypes About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Pathways & Interactionsfor NR3C1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/25 super-pathways (see all 25 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Transcription_Role of VDR in regulation of genes involved in osteoporosis 2 Development_Prolactin receptor signaling 3 Immune response_MIF-JAB1 signaling 4 Nuclear Receptor transcription pathway 5 Generic Transcription Pathway
Pathway sources See GeneCards unified pathways Show all pathways 5/8 EMD Millipore Pathways for NR3C1 (see all 8 )1 R&D Systems Pathway for NR3C1 4 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for NR3C1 5/7 GeneGo (Thomson Reuters) Pathways for NR3C1 (see all 7 )5/10 BioSystems Pathways for NR3C1 (see all 10 ) 3
Reactome Pathways for NR3C1 2 PharmGKB Pathways for NR3C1 1
Kegg Pathway (Kegg details for NR3C1) :
NR3C1 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for NR3C1 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/237 Interacting proteins for NR3C1 (P04150 1 , 2 , 3 ENSP00000231509 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 237 )About this table Gene Ontology (GO): 5/34 biological process terms (GO ID links to tree view) (see all 34 ): About this table
NR3C1 for ontologies About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Drugs & Compoundsfor NR3C1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
NR3C1 for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for NR3C1
Compounds for NR3C1 available from Tocris Bioscience About this table Compound Action
CAS
# Mifepristone Progesterone and glucocorticoid antagonist [84371-65-3] GSK 9027 Glucocorticoid receptor agonist [1229096-88-1] Dexamethasone Anti-inflammatory glucocorticoid [50-02-2] Budesonide Synthetic glucocorticoid; anti-inflammatory and chemopreventive [51333-22-3] Fluticasone propionate Selective high affinity glucocorticoid agonist [80474-14-2]
4 HMDB Compounds for NR3C1 About this table 10/39 DrugBank Compounds for NR3C1 (see all 39 ) About this table 10/120 Novoseek chemical compound relationships for NR3C1 gene (see all 120 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
dexamethasone
91.8
1114
8574285 (4), 12781044 (4), 19167480 (4), 18657064 (4) (see all 99 )
mifepristone
91.4
396
19635558 (8), 17509631 (5), 12695529 (4), 14671179 (3) (see all 99 )
steroid
86
485
15155759 (4), 16890204 (4), 2168876 (3), 9731032 (3) (see all 99 )
11beta-hydroxysteroid
85.6
72
11836450 (3), 15866114 (2), 19048413 (2), 10588816 (1) (see all 52 )
cortisone
78.3
32
15062542 (2), 16178882 (2), 15780662 (1), 8200959 (1) (see all 21 )
cortivazol
76.6
24
11741935 (4), 2205477 (2), 15677712 (2), 2039752 (2) (see all 7 )
androstane
75.5
44
16399345 (2), 19541828 (2), 16188404 (2), 15933212 (2) (see all 24 )
progesterone
74.3
351
1920329 (4), 20156884 (4), 2249895 (3), 18060946 (3) (see all 99 )
corticosterone
72.2
114
2257242 (3), 17446698 (3), 12538030 (3), 10624831 (2) (see all 59 )
fluticasone propionate
69
48
15860753 (3), 10200007 (3), 9087160 (2), 12503693 (2) (see all 29 )
Search CenterWatch for drugs/clinical trials and news about NR3C1 / GCR
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Transcriptsfor NR3C1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for NR3C1 gene (15 alternative transcripts): NM_000176.2 NM_001018074.1 NM_001018075.1 NM_001018076.1 NM_001018077.1 NM_001020825.1 NM_001024094.1 NM_001204258.1 NM_001204259.1 NM_001204260.1 NM_001204261.1 NM_001204262.1 NM_001204263.1 NM_001204264.1 NM_001204265.1 Unigene Cluster for NR3C1:
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) Hs.122926 [show with all ESTs ] Unigene Representative Sequence: NM_001018077 17 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000394464 (uc003lmy.3 uc003lmz.3 uc003lna.3 uc003lnb.3 uc011dbk.2 )ENST00000415690 ENST00000504572 ENST00000394466 (uc003lni.2 ) ENST00000231509 (uc021yfb.1 )ENST00000503201 (uc021yfa.1 uc003lng.2 ) ENST00000504336 ENST00000510170 ENST00000508760 ENST00000502892 ENST00000514699 ENST00000502500 ENST00000503701 ENST00000505058 ENST00000343796 (uc003lnc.3 uc003lnf.3 uc003lnd.3 uc003lne.3 )ENST00000424646 ENST00000416954 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NR3C1 (see all 9 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NR3C1 (see all 7 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 15 ): NR3C1 (NM_001024094 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NR3C1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NR3C1
Additional cDNA sequence: AB307716.1 AJ877166.1 AJ877167.1 AJ877168.1 AJ877169.1 AJ877170.1 AJ877171.1 AJ877172.1 AJ888004.1 AK223594.1 AK302050.1 AK314789.1 AM183262.1 BC015610.2 BX640610.1 BX648553.1 HQ692822.1 JN797823.1 JN797824.1 U01351.1 U25029.1 X03225.1 X03348.1
23 DOTS entries : DT.100786784 DT.99998911
DT.85105550 DT.95296381 DT.95269160 DT.100786795 DT.100786792 DT.207488 DT.92441907 DT.102832223 DT.120796451 DT.120796581 DT.40126589 DT.120796608 DT.100786783 DT.100786785 DT.120796481 DT.218847 DT.100037621 DT.100737448 DT.100786786 DT.100786788 DT.120796605 24/383 AceView cDNA sequences (see all 383 ):
AU139241 AA234527 BQ433598 BE739816 BU619054 CA777596 AI934556 AA252235 BU147202 CA416785 AA437348 CB132485 CA392568 BQ005253 AW299567 AA382009 BM310859 CB112400 BQ030399 CA310206 U01351 BE875671 BF433954 BM468899 GeneLoc Exon Structure
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Expression for NR3C1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section NR3C1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: --
About this image NR3C1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See NR3C1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for NR3C1 SOURCE GeneReport for Unigene cluster: Hs.122926 UniProtKB/Swiss-Prot: GCR_HUMAN, P04150 Tissue specificity : Widely expressed. In the heart, detected in left and right atria, left and right ventricles, aorta,apex, intraventricular septum, and atrioventricular node as well as whole adult and fetal heart SABiosciences Expression via Pathway-Focused PCR Arrays including NR3C1 (see all 10 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NR3C1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat NR3C1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NR3C1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NR3C1 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NR3C1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Orthologsfor NR3C1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for NR3C1 gene from 6/18 species (see all 18 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
mouse (Mus musculus)
Mammalia
Nr3c11 , 5
nuclear receptor subfamily 3, group C, member 11, 5
89.58(n) 1 90.7(a) 1
 
18 (21.09 cM) 5 14815 1 NM_008173.3 1 NP_032199.3 1 39410545 5
chicken (Gallus gallus)
Aves
NR3C11
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid more
74.25(n) 75.81(a)
 
416343 NM_001037826.1 NP_001032915.1
lizard (Anolis carolinensis)
Reptilia
NR3C16
--
75(a)
1 ↔ 1
2(126275215-126336129)
African clawed frog (Xenopus laevis)
Amphibia
xGR2
glucocorticoid receptor protein
76.06(n)
 
X72211.1
zebrafish (Danio rerio)
Actinopterygii
CB362131.12
--
72.79(n)
 
CB362131.1
worm (Caenorhabditis elegans)
Secernentea
nhr-256
Nuclear hormone receptor family member nhr-25
13(a)
1 → many
X(13008424-13013892)
ENSEMBL Gene Tree for NR3C1 (if available)TreeFam Gene Tree for NR3C1 (if available)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Paralogsfor NR3C1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for NR3C1 gene ESRRA 2 RXRG 2 PGR 2 ESR2 2 ESRRB 2 HNF4G 2 NR2F6 2 NR2E1 2 ESRRG 2 NR3C2 2 RXRA 2 NR2F1 2 NR2F2 2 AR 2 ESR1 2 NR2C1 2 HNF4A 2 NR2C2 2 RXRB 2 16 SIMAP similar genes for NR3C1 using alignment to 14 protein entries: GCR_HUMAN (see all proteins ):NR5A1 NR3C4 ESR1 VDR NR1I3 HNF4G RORA PGR AR HNF4alpha NR3C2 ESRRB ESR2 PPARA ESRRA ERRgamma
NR3C1 for paralogs About GeneDecksing 1 Pseudogenes.org Pseudogene for NR3C1 PGOHUM00000249184
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Variantsfor NR3C1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section UniProtKB/Swiss-Prot: GCR_HUMAN, P04150 Polymorphism : Carriers of the 22-Glu-Lys-23 allele are relatively more resistant to the effects of GCs with respect tothe sensitivity of the adrenal feedback mechanism than non-carriers, resulting in a better metabolic health profile. Carriers have a better survival than non-carriers, as well as lower serum CRP levels. The 22-Glu-Lys-23 polymorphism is associated with a sex-specific, beneficial body composition at young-adult age, as well as greater muscle strength in males
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 5 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for NR3C1 (142657496 - 142815077 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 4 variations for NR3C1 2 CNVs : 7475 6451 2 Indels : 46781 12763 Human Gene Mutation Database (HGMD) : NR3C1 Locus Specific Mutation Databases (LSDB): NR3C1 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NR3C1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Disorders
/ Diseasesfor NR3C1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
NR3C1 for disorders About GeneDecksing
OMIM gene information: 138040
OMIM disorders : --UniProtKB/Swiss-Prot: GCR_HUMAN, P04150
Defects in NR3C1 are a cause of glucocorticoid resistance (GCRES) [MIM:138040]; also known as cortisol resistance. It is a hypertensive, hyperandrogenic disorder characterized by increased serum cortisol concentrations. Inheritance is autosomal dominant 20/205 diseases for NR3C1 (see all 205 ): About MalaCards glucocorticoid-remediable aldosteronism corticosteroid-binding globulin deficiency glucocorticoid resistance dosage-sensitive sex reversal open-angle glaucoma post-traumatic stress disorder pituitary-dependent cushing's disease 21-hydroxylase deficiency estrogen-receptor negative breast cancer pre-b-cell acute lymphoblastic leukemia spinal cord injury primary pigmented nodular adrenocortical disease sex reversal treacher collins syndrome primary open angle glaucoma cortisol resistance patent ductus arteriosus enhanced s-cone syndrome glucose intolerance primary cortisol resistance 1 disease from the University of Copenhagen DISEASES database for NR3C1 :Proteinuria 10/91 Novoseek disease relationships for NR3C1 gene (see all 91 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
cushing syndrome
69.7
17
10802524 (2), 1794941 (1), 16456492 (1), 16855182 (1) (see all 13 )
mammary tumor
63.9
36
1871124 (2), 10748103 (2), 2159467 (1), 8407999 (1) (see all 28 )
hypercortisolism
61.5
4
17587649 (1), 10995524 (1), 16118334 (1), 18406688 (1)
hypercortisolemia
61.2
8
16546487 (1), 12399952 (1), 17037809 (1), 11131467 (1) (see all 5 )
asthma
55.9
137
18799869 (5), 9560836 (4), 18952539 (3), 9329880 (3) (see all 66 )
major depression
55.3
70
11274650 (5), 16019586 (4), 12727135 (3), 12242054 (2) (see all 36 )
acth syndrome ectopic
49.5
4
8396510 (1), 7958079 (1), 20015838 (1), 8254033 (1)
shock
46.3
151
11463862 (8), 8745575 (5), 14673132 (4), 7917000 (3) (see all 69 )
nasal polyps
44.6
18
18671773 (3), 19848249 (2), 18396779 (2), 11800371 (2) (see all 9 )
inflammation
43.3
44
10435109 (2), 18821468 (2), 9482836 (1), 15541765 (1) (see all 32 )
Genetic Association Database (GAD): NR3C1 Human Genome Epidemiology (HuGE) Navigator: NR3C1 (169 documents) Export disorders for NR3C1 gene to outside databases
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Publicationsfor NR3C1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for NR3C1 gene, integrated from 9 sources (see all 2367 ): (articles sorted by number of sources associating them with NR3C1) Utopia : connect your pdf to the dynamic world of online information
The ER22/23EK polymorphism in the glucocorticoid receptor gene is associated with a beneficial body composition and muscle strength in young adults. (PubMed id 15292341) 1 , 2 , 4 van Rossum E.F.C.... Lamberts S.W.J. (2004) Association of the ER22/23EK polymorphism in the glucocorticoid receptor gene with survival and C-reactive protein levels in elderly men. (PubMed id 15276593) 1 , 2 , 4 van Rossum E.F.C.... Lamberts S.W.J. (2004) A polymorphism in the glucocorticoid receptor gene, which decreases sensitivity to glucocorticoids in vivo, is associated with low insulin and cholesterol levels. (PubMed id 12351458) 1 , 2 , 4 van Rossum E.F.C.... Lamberts S.W.J. (2002) Lack of association between five polymorphisms in the human glucocorticoid receptor gene and glucocorticoid resistance. (PubMed id 9150737) 1 , 2 , 4 Koper J.W....Lamberts S.W.J. (1997) Primary structure and expression of a functional human glucocorticoid receptor cDNA. (PubMed id 2867473) 1 , 2 , 3 Hollenberg S.M.... Evans R.M. (1985) Proteasome-mediated glucocorticoid receptor degradation restricts transcriptional signaling by glucocorticoids. (PubMed id 11555652) 1 , 2 , 9 Wallace A.D. and Cidlowski J.A. (2001) Identification of a novel glucocorticoid receptor mutation in budesonide-resistant human bronchial epithelial cells. (PubMed id 12920235) 1 , 7, 9 Kunz S....Miesfeld R.L. (2003) Regulation of expanded polyglutamine protein aggregation and nuclear localization by the glucocorticoid receptor. (PubMed id 10639135) 1 , 2 , 9 Diamond M.I.... Yamamoto K.R. (2000) Identification of the activation-labile gene: a single point mutation in the human glucocorticoid receptor presents as two distinct receptor phenotypes. (PubMed id 8316249) 1 , 2 , 9 Ashraf J. and Thompson E.B. (1993) Glucocorticoid receptor gene, low-grade inflammation, and heart failure: the Heart and Soul study. (PubMed id 20371666) 1 , 7, 9 Otte C....Whooley M.A. (2010)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
External Searches for NR3C1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genome Databases showing NR3C1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Other Databases showing NR3C1 gene
(According to HUGE )
About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Specialized Databases showing NR3C1 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for NR3C1 Pharmacogenomics, SNPs, Pathways GeneReviews http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/NR3C1 NIEHS-SNPs http://egp.gs.washington.edu/data/nr3c1/ Wikipedia http://en.wikipedia.org/wiki/Glucocorticoid_receptor
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
About This Section Patent Information for NR3C1 gene: Search GeneIP for patents involving NR3C1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Productsfor NR3C1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for NR3C1 OriGene shRNA RFP for NR3C1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for NR3C1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NR3C1 OriGene Protein Over-expression Lysate for NR3C1 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for NR3C1 OriGene 3'-UTR Clone for NR3C1 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NR3C1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NR3C1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for NR3C1 OriGene Custom Protein Services for NR3C1 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat NR3C1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NR3C1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat NR3C1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat NR3C1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NR3C1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NR3C1
Antibodies & Assays for NR3C1   (GR)
Tocris compounds for NR3C1
NR3C1 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NR3C1
ThermoFisher Antibody for NR3C1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NR3C1
Jump to Section...
Aliases for NR3C1
Databases for NR3C1
Disorders / Diseases for NR3C1
Domains / Families for NR3C1
Drugs / Compounds for NR3C1
Expression for NR3C1
Function for NR3C1
Genomic Views for NR3C1
Intellectual Property for NR3C1
Orthologs for NR3C1
Paralogs for NR3C1
Pathways / Interactions for NR3C1
Products for NR3C1
Proteins for NR3C1
Publications for NR3C1
Search Box for NR3C1
Summaries for NR3C1
Transcripts for NR3C1
Variants for NR3C1
TOP
BOTTOM