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Aliases for NR1H5P Gene

Aliases for NR1H5P Gene

  • Nuclear Receptor Subfamily 1 Group H Member 5, Pseudogene 2 3 5
  • Nuclear Receptor Subfamily 1, Group H, Member 5, Pseudogene 2
  • Nuclear Receptor Subfamily 1, Group H, Member 5 Pseudogene 2
  • Nuclear Receptor Subfamily 1, Group H, Member 4 Pseudogene 3
  • NR1H5 3
  • Fxrb 3

External Ids for NR1H5P Gene

Previous GeneCards Identifiers for NR1H5P Gene

  • GC01P115179
  • GC01P115377
  • GC01P113235

Summaries for NR1H5P Gene

GeneCards Summary for NR1H5P Gene

NR1H5P (Nuclear Receptor Subfamily 1 Group H Member 5, Pseudogene) is a Pseudogene.

Additional gene information for NR1H5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NR1H5P Gene

Genomics for NR1H5P Gene

Regulatory Elements for NR1H5P Gene

Enhancers for NR1H5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H115641 1.4 ENCODE dbSUPER 14.6 +807.9 807930 2 HDGF PKNOX1 ARNT SIN3A YBX1 DMAP1 ZNF2 ZNF766 ZNF302 ZNF416 ATP1A1-AS1 SIKE1 ENSG00000237993 VANGL1 NR1H5P ENSG00000207502 CD58 CASQ2
GH01H113990 0.9 dbSUPER 14.6 -843.3 -843321 1 PKNOX1 INSM2 ZNF76 FEZF1 ZNF2 ZNF121 ZNF366 ZSCAN5C OVOL3 ZNF488 LRIG2 LOC100421402 TRIM33 RSBN1 OLFML3 RPS15P1 NR1H5P SIKE1 DCLRE1B RPL13AP10
GH01H114803 0.4 ENCODE 0.3 -31.2 -31242 0 PKNOX1 RFX1 SIKE1 SYCP1 NR1H5P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NR1H5P on UCSC Golden Path with GeneCards custom track

Genomic Location for NR1H5P Gene

Chromosome:
1
Start:
114,834,456 bp from pter
End:
114,851,544 bp from pter
Size:
17,089 bases
Orientation:
Plus strand

Genomic View for NR1H5P Gene

Genes around NR1H5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NR1H5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NR1H5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NR1H5P Gene

Proteins for NR1H5P Gene

Post-translational modifications for NR1H5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for NR1H5P Gene

Domains & Families for NR1H5P Gene

Gene Families for NR1H5P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NR1H5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NR1H5P Gene

Function for NR1H5P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for NR1H5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NR1H5P Gene

Localization for NR1H5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NR1H5P Gene

Pathways & Interactions for NR1H5P Gene

SuperPathways for NR1H5P Gene

No Data Available

Interacting Proteins for NR1H5P Gene

Gene Ontology (GO) - Biological Process for NR1H5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NR1H5P Gene

Drugs & Compounds for NR1H5P Gene

No Compound Related Data Available

Transcripts for NR1H5P Gene

mRNA/cDNA for NR1H5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for NR1H5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for NR1H5P Gene

No ASD Table

Relevant External Links for NR1H5P Gene

GeneLoc Exon Structure for
NR1H5P
ECgene alternative splicing isoforms for
NR1H5P

Expression for NR1H5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NR1H5P Gene

mRNA differential expression in normal tissues according to GTEx for NR1H5P Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of NR1H5P Gene:

NR1H5P
genes like me logo Genes that share expression patterns with NR1H5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NR1H5P Gene

Orthologs for NR1H5P Gene

Evolution for NR1H5P Gene

ENSEMBL:
Gene Tree for NR1H5P (if available)
TreeFam:
Gene Tree for NR1H5P (if available)

No data available for Orthologs for NR1H5P Gene

Paralogs for NR1H5P Gene

No data available for Paralogs for NR1H5P Gene

Variants for NR1H5P Gene

Relevant External Links for NR1H5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NR1H5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NR1H5P Gene

Disorders for NR1H5P Gene

No disorders were found for NR1H5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NR1H5P Gene

Publications for NR1H5P Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3 60
  2. Analysis of nuclear receptor pseudogenes in vertebrates: how the silent tell their stories. (PMID: 18065488) Zhang ZD … Gerstein M (Molecular biology and evolution 2008) 3 60
  3. Evolutionary genomics of nuclear receptors: from twenty-five ancestral genes to derived endocrine systems. (PMID: 15229292) Bertrand S … Robinson-Rechavi M (Molecular biology and evolution 2004) 3 60
  4. Identification of farnesoid X receptor beta as a novel mammalian nuclear receptor sensing lanosterol. (PMID: 12529392) Otte K … Deuschle U (Molecular and cellular biology 2003) 3 60

Products for NR1H5P Gene

Sources for NR1H5P Gene

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