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Aliases for NPSR1-AS1 Gene

Subcategory (RNA class) for NPSR1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NPSR1-AS1 Gene

  • NPSR1 Antisense RNA 1 2 3 5
  • Asthma-Associated Alternatively Spliced Gene 1 2 3
  • NPSR1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • AAA1 3

External Ids for NPSR1-AS1 Gene

Summaries for NPSR1-AS1 Gene

Entrez Gene Summary for NPSR1-AS1 Gene

  • This gene is located within a region that has been associated with asthma susceptibility. The locus is considered non-protein-coding based on lack of protein homology and a lack of experimental support for an encoded protein. Three alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, May 2010]

GeneCards Summary for NPSR1-AS1 Gene

NPSR1-AS1 (NPSR1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with NPSR1-AS1 include Asthma.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPSR1-AS1 Gene

Genomics for NPSR1-AS1 Gene

Regulatory Elements for NPSR1-AS1 Gene

Enhancers for NPSR1-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around NPSR1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NPSR1-AS1 Gene

34,346,512 bp from pter
34,871,582 bp from pter
525,071 bases
Minus strand

Genomic View for NPSR1-AS1 Gene

Genes around NPSR1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPSR1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPSR1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPSR1-AS1 Gene

Proteins for NPSR1-AS1 Gene

Post-translational modifications for NPSR1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPSR1-AS1 Gene

Domains & Families for NPSR1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPSR1-AS1 Gene

Function for NPSR1-AS1 Gene

Phenotypes for NPSR1-AS1 Gene

GenomeRNAi human phenotypes for NPSR1-AS1:
genes like me logo Genes that share phenotypes with NPSR1-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPSR1-AS1 Gene

Localization for NPSR1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NPSR1-AS1 Gene

Pathways & Interactions for NPSR1-AS1 Gene

SuperPathways for NPSR1-AS1 Gene

No Data Available

Interacting Proteins for NPSR1-AS1 Gene

Gene Ontology (GO) - Biological Process for NPSR1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NPSR1-AS1 Gene

Drugs & Compounds for NPSR1-AS1 Gene

No Compound Related Data Available

Transcripts for NPSR1-AS1 Gene

Unigene Clusters for NPSR1-AS1 Gene

NPSR1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NPSR1-AS1 Gene

No ASD Table

Relevant External Links for NPSR1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NPSR1-AS1 Gene

mRNA expression in normal human tissues for NPSR1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NPSR1-AS1 Gene

This gene is overexpressed in Kidney - Cortex (x11.9), Muscle - Skeletal (x5.1), and Brain - Anterior cingulate cortex (BA24) (x4.3).

SOURCE GeneReport for Unigene cluster for NPSR1-AS1 Gene Hs.487951

genes like me logo Genes that share expression patterns with NPSR1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for NPSR1-AS1 Gene

Orthologs for NPSR1-AS1 Gene

Evolution for NPSR1-AS1 Gene

Gene Tree for NPSR1-AS1 (if available)
Gene Tree for NPSR1-AS1 (if available)

No data available for Orthologs for NPSR1-AS1 Gene

Paralogs for NPSR1-AS1 Gene

No data available for Paralogs for NPSR1-AS1 Gene

Variants for NPSR1-AS1 Gene

Sequence variations from dbSNP and Humsavar for NPSR1-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs765133 -- 34,426,704(+) GTCAC(A/C/G/T)AGCTA intron-variant
rs917411 -- 34,428,728(+) acaat(A/G)tattc intron-variant
rs958344 -- 34,453,483(+) AATGA(G/T)GAGAT intron-variant
rs975214 -- 34,601,451(+) ATAAA(C/T)GACTC intron-variant
rs975215 -- 34,601,474(+) CCAAC(C/T)CCCAT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for NPSR1-AS1 Gene

Disorders for NPSR1-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for NPSR1-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
  • asthma, protection against
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for NPSR1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with NPSR1-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for NPSR1-AS1 Gene

Publications for NPSR1-AS1 Gene

  1. Characterization of a common susceptibility locus for asthma-related traits. (PMID: 15073379) Laitinen T. … Kere J. (Science 2004) 2 3 67
  2. Loci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers. (PMID: 23382691) Lauc G. … Rudan I. (PLoS Genet. 2013) 3
  3. Replication of genetic association studies in asthma and related phenotypes. (PMID: 20395963) Undarmaa S. … Suzuki Y. (J. Hum. Genet. 2010) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for NPSR1-AS1 Gene

Sources for NPSR1-AS1 Gene