Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

NPSR1 Gene

protein-coding   GIFtS: 52
GCID: GC07P034664

neuropeptide S receptor 1

(Previous name: G protein-coupled receptor 154 )
(Previous symbol: GPR154)
 Explore 14 diseases affiliated with
NPSR1 via our new
 Human Malady Compendium 
Biological research products
for NPSR1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Neuropeptide S Receptor 11 2     G-Protein Coupled Receptor PGR142 3
GPR1541 2 3 5     ASRT22 5
GPRA1 2 3 5     VRR12 5
PGR141 2 3 5     NPSR2
G Protein-Coupled Receptor 1541 2     G Protein-Coupled Receptor For Asthma Susceptibility2
G-Protein Coupled Receptor 1542 3     Neuropeptide S Receptor2
G-Protein Coupled Receptor For Asthma Susceptibility2 3     Vasopressin Receptor-Related Receptor 12

External Ids:    HGNC: 236311   Entrez Gene: 3871292   Ensembl: ENSG000001872587   OMIM: 6085955   UniProtKB: Q6W5P43   

Export aliases for NPSR1 gene to outside databases


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for NPSR1:
This gene is a member of the G protein-coupled receptor 1 family and encodes a plasma membrane protein. Increased
expression of this gene in ciliated cells of the respiratory epithelium and in bronchial smooth muscle cells is
associated with asthma. Mutations in this gene have also been associated with this disease. Alternatively spliced
variants which encode different protein isoforms have been described; however, not all variants have been fully
characterized. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4
Function: May be active in signaling pathway in an autocrine or paracrine fashion in several tissues. Receptor for
neuropeptide S, it may mediate its action, such as inhibitory effects, on cell growth. Involved in pathogenesis of
asthma and other IgE-mediated diseases

Gene Wiki entry for NPSR1 (Neuropeptide S receptor)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000007.13  NC_018918.1  NT_007819.17  NT_079592.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the NPSR1 gene promoter:
         Bach1   Pbx1a   HTF   POU3F2   HNF-3beta   C/EBPalpha   CHOP-10   HSF2   En-1   ATF6   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidNPSR1 promoter sequence
   Search SABiosciences Chromatin IP Primers for NPSR1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NPSR1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7p14.3   Ensembl cytogenetic band:  7p14.3   HGNC cytogenetic band: 7p14.3

NPSR1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NPSR1 gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07P034664:  view genomic region     (about GC identifiers)

Start:
34,697,851 bp from pter      End:
34,917,944 bp from pter
Size:
220,094 bases      Orientation:
plus strand

1 alternative location:
Chr7+,CRA_TCAG 34,742,034-34,962,952     

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4 (See protein sequence)
Recommended Name: Neuropeptide S receptor  
Size: 371 amino acids; 42687 Da
Subcellular location: Isoform 1: Cell membrane; Multi-pass membrane protein
Subcellular location: Isoform 3: Cell membrane; Multi-pass membrane protein
Subcellular location: Isoform 4: Cell membrane; Multi-pass membrane protein
Subcellular location: Isoform 2: Cytoplasm
Subcellular location: Isoform 5: Cytoplasm
Subcellular location: Isoform 6: Cytoplasm
Subcellular location: Isoform 7: Cytoplasm
Subcellular location: Isoform 9: Cytoplasm
Miscellaneous: Only isoforms with 7 transmembrane topology (isoform 1, isoform 3 and isoform 4) are transported into
the plasma membrane in transfected cells, while the truncated ones retain intracellular compartments
Secondary accessions: A2RTZ4 Q2XP58 Q56H76 Q56H77 Q56H78 Q6JSL4 Q6JSL5 Q6JSL6 Q6JSL7 Q6JSL8 Q6W5P3
Q6ZMB8
Alternative splicing: 9 isoforms:  Q6W5P4-1   Q6W5P4-2   Q6W5P4-3   Q6W5P4-4   Q6W5P4-5   Q6W5P4-6   Q6W5P4-7   Q6W5P4-8   
Q6W5P4-9   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for NPSR1: NX_Q6W5P4

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q6W5P4

  • NPSR1 Protein expression data from MOPED and PaxDb:    About this image 
    NPSR1 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_997055.1  NP_997056.1  

    ENSEMBL proteins: 
     ENSP00000370965   ENSP00000434955   ENSP00000353788   ENSP00000379402   ENSP00000370953  
     ENSP00000370955   ENSP00000352839   ENSP00000433258   ENSP00000370950  
    Reactome Protein details: Q6W5P4
    Human Recombinant Protein Products for NPSR1: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: NPSR1
    OriGene Custom Protein Services for NPSR1 
    GenScript Custom Purified and Recombinant Proteins Services for NPSR1
    Novus Biologicals NPSR1 Protein
    Novus Biologicals NPSR1 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for NPSR1

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm IDA--
    GO:0005886plasma membrane TAS--
    GO:0016021integral to membrane IEA--

    NPSR1 for ontologies           About GeneDecksing



    NPSR1 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for NPSR1 
    GenScript Custom Superior Antibodies Services for NPSR1
    Novus Biologicals NPSR1 Antibodies
    Abcam antibodies for NPSR1 
    Uscn Antibodies for NPSR1
    ThermoFisher Antibodies for NPSR1

    Assay Products for NPSR1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript NPSR1-overexpressing Cell Line for Assay
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for NPSR1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    NPSR1 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR017452 GPCR_Rhodpsn_7TM
     IPR000276 GPCR_Rhodpsn
     IPR001817 Vasoprsn_rcpt

    Graphical View of Domain Structure for InterPro Entry Q6W5P4

    ProtoNet protein and cluster: Q6W5P4

    UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4
    Similarity: Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: NPSR1_HUMAN, Q6W5P4
    Function: May be active in signaling pathway in an autocrine or paracrine fashion in several tissues. Receptor for
    neuropeptide S, it may mediate its action, such as inhibitory effects, on cell growth. Involved in pathogenesis of
    asthma and other IgE-mediated diseases

         Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005000vasopressin receptor activity IEA--
         
    NPSR1 for ontologies           About GeneDecksing


    Phenotypes:
         3 MGI mutant phenotypes (inferred from 1 allele(MGI details for Npsr1):
     homeostasis/metabolism  immune system  respiratory system 

    NPSR1 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-out Npsr1tm1Bhk for NPSR1
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for NPSR1 

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat NPSR1
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate NPSR1
    SwitchGear 3'UTR luciferase reporter plasmidNPSR1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NPSR1 (see all 7)
    OriGene shRNA RFP: NPSR1
    OriGene siRNA: NPSR1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NPSR1
    Sirion Biotech Custom design and validation of potent shRNA sequences against NPSR1 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for NPSR1
    Sirion Biotech Customized adenovirus for overexpression of NPSR1 
    Sirion Biotech Customized adenovirus for potent knockdown of NPSR1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NPSR1 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NPSR1 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): NPSR1 (NM_207172)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for NPSR1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NPSR1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for NPSR1
    Search LifeMap BioReagents cell lines for NPSR1
    Sirion Biotech Customized stable knockdown cell line services for NPSR1 
    Sirion Biotech Customized inducible knockdown cell line services for NPSR1
    Sirion Biotech Customized stable overexpressing cell line services for NPSR1
    Sirion Biotech Customized inducible overexpressing cell line services for NPSR1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NPSR1


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Class A/1 (Rhodopsin-like receptors)
    Class A/1 (Rhodopsin-like receptors)1.00
    Peptide ligand-binding receptors0.61
    GPCR ligand binding0.75
    2Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    3G alpha (q) signalling events
    G alpha (q) signalling events1.00
    Gastrin-CREB signalling pathway via PKC and MAPK0.90
    4G beta:gamma signalling through PLC beta
    G alpha (s) signalling events0.14

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    5/9        Reactome Pathways for NPSR1 (see all 9)
        GPCR downstream signaling
    Peptide ligand-binding receptors
    Gastrin-CREB signalling pathway via PKC and MAPK
    Signaling by GPCR
    GPCR ligand binding



    NPSR1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for NPSR1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/184 Interacting proteins for NPSR1 (ENSP000003528394) via UniProtKB, MINT, STRING, and/or I2D (see all 184)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ADCY2ENSP000003429524STRING: ENSP00000342952
    ADORA2AENSP000003366304STRING: ENSP00000336630
    ADORA2BENSP000003045014STRING: ENSP00000304501
    ADRB2ENSP000003053724STRING: ENSP00000305372
    AVPR1BENSP000003560944STRING: ENSP00000356094
    About this table

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    NPSR1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for NPSR1

    1 HMDB Compound for NPSR1    About this table
    CompoundSynonyms CAS #PubMed Ids
    Vasopressin3-(Phenylalanine)-8-lysine oxytocin (see all 8)11000-17-2--

    1 DrugBank Compound for NPSR1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Halothane2-Bromo-2-Chloro-1,1,1-Trifluoroethane (see all 14)151-67-7targetother/unknown11961111 12826849 10913255

    1 Novoseek chemical compound relationship for NPSR1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    methacholine 39.6 4 16522461 (4)

    Search CenterWatch for drugs/clinical trials and news about NPSR1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for NPSR1 gene (2 alternative transcripts): 
    NM_207172.1  NM_207173.1  

    Unigene Cluster for NPSR1:

    Neuropeptide S receptor 1
    Hs.652373  [show with all ESTs]
    Unigene Representative Sequence: AY310326
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000381553 ENST00000465305 ENST00000360581(uc003teg.1 uc003teh.1)
    ENST00000396095(uc010kwu.1) ENST00000381542(uc010kwv.1) ENST00000381544(uc010kwt.1)
    ENST00000359791(uc003tei.1) ENST00000531252(uc010kww.1 uc011kar.1)
    ENST00000381539

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat NPSR1
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate NPSR1
    SwitchGear 3'UTR luciferase reporter plasmidNPSR1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NPSR1 (see all 7)
    OriGene shRNA RFP: NPSR1
    OriGene siRNA: NPSR1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NPSR1
    Sirion Biotech Custom design and validation of potent shRNA sequences against NPSR1 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NPSR1 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NPSR1 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): NPSR1 (NM_207172)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for NPSR1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NPSR1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NPSR1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat NPSR1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NPSR1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NPSR1

    Additional cDNA sequence: 

    AK172847.1 AY255536.1 AY310326.1 AY310327.1 AY310328.1 AY310329.1 AY310332.1 AY956446.1 
    AY956447.1 AY956448.1 BC132693.1 BC132695.1 BC144380.1 

    5 DOTS entries:

    DT.97798466  DT.75119172  DT.121106215  DT.435241  DT.102832532 

    14 AceView cDNA sequences:

    AY310326 NM_207173 AY310328 AY310327 AY255536 AY310332 NM_207172 AY310329 
    AY310331 AY310330 CD673194 AK172847 BM828553 AI500347 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for NPSR1    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10
    SP1:                          -                                       
    SP2:                          -     -                                 
    SP3:                    -     -                                       
    SP4:                    -     -     -                                 
    SP5:                                                                  


    ECgene alternative splicing isoforms for NPSR1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    NPSR1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --
    NPSR1 Expression
    About this image
    See NPSR1 Protein Expression from SPIRE MOPED and PaxDB
    SOURCE GeneReport for Unigene cluster: Hs.652373

    UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4
    Tissue specificity: Ubiquitous. Isoform 1 is predominantly expressed in smooth muscle. Isoform 4 is predominantly
    expressed in epithelial cells. In bronchial biopsies, it is expressed in smooth muscle cells of asthma patients, but
    not in control patients; whereas in epithelial cells, its expression is consistently stronger in asthma patients

        SABiosciences Expression via Pathway-Focused PCR Array including NPSR1: 
              G Protein Coupled Receptors 384HT in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NPSR1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat NPSR1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NPSR1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NPSR1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NPSR1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for NPSR1 gene from 3/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves NPSR11 neuropeptide S receptor 1 74.03(n)
    76.24(a)
      428462  XM_426022.2  XP_426022.2 
    lizard
    (Anolis carolinensis)
    Reptilia NPSR16
    --
    71(a)
    1 ↔ 1
    6(46122642-46151858)
    fruit fly
    (Drosophila melanogaster)
    Insecta CcapR1 Cardioacceleratory peptide receptor 53.33(n)
    44.48(a)
      2768688  NM_206574.4  NP_996297.3 


    ENSEMBL Gene Tree for NPSR1 (if available)
    TreeFam Gene Tree for NPSR1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for NPSR1 gene
    GPR1502  AVPR1A2  AVPR1B2  AVPR22  OXTR2  GNRHR2  GNRHR22  
    4 SIMAP similar genes for NPSR1 using alignment to 2 protein entries:     NPSR1_HUMAN (see all proteins):
    GIR    OXTR    AVPR2    AVPR1

    NPSR1 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for NPSR1
    PGOHUM00000233171


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/4093 NCBI SNPs in NPSR1 are shown (see all 4093    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 7 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs3249811,2
    C,F,A,Hother34862238(+) TATTAA/TTTGGC 1 -- int153Minor allele frequency- T:0.49NS EA NA WA CSA EU 10823
    rs21990641,2
    C,F,A--34590111(-) cccgcT/Cttgat 2 -- int16Minor allele frequency- C:0.12NA CSA WA EA 363
    rs359963321,2
    C--34591969(+) AGCACAAT/-AAATA 2 -- int11Minor allele frequency- -:0.50NA 2
    rs352998341,2
    C,F--34591971(+) CACAATAA/-ATATA 2 -- int13Minor allele frequency- -:0.36NS CSA 90
    rs3239101,2
    C,A--34618922(+) TGATTC/TTTGGA 2 -- int16Minor allele frequency- T:0.14NA WA EA 541
    rs759656471,2
    C--34655996(+) CTTCC-/CCTCCTCT 3 -- int10--------
    rs1400426151,2
    --34695912(+) GATACA/GTTTCT 4 -- us2k1 int10--------
    rs1883778551,2
    --34695940(+) CATCAC/TTTTGC 4 -- int1 us2k10--------
    rs25305431,2
    C,F,O,A,H--34695959(+) TTGTAC/TAGATA 4 -- int1 us2k118Minor allele frequency- N:0.00NS EA NA WA CSA 1094
    rs1932108631,2
    --34695997(+) GGTTAA/CACAAT 4 -- us2k1 int10--------

    HapMap Linkage Disequilibrium report for NPSR1 (34697851 - 34917944 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 11 variations for NPSR1
         9 CNVs: 81900 10182 52216 64798 94435 10183 52215 52218 38676
         2 Indels: 52217 59407
    Human Gene Mutation Database (HGMD): NPSR1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing NPSR1
    DNA2.0 Custom Variant and Variant Library Synthesis for NPSR1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    NPSR1 for disorders           About GeneDecksing

    OMIM gene information: 608595   
    OMIM disorders: 608584  
    UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4
  • Defects in NPSR1 are a cause of asthma-related traits type 2 (ASRT2) [MIM:608584]. Asthma-related traits
  • include clinical symptoms of asthma, such as coughing, wheezing, dyspnea, bronchial hyperresponsiveness as assessed by
    methacholine challenge test, serum IgE levels, atopy and atopic dermatitis

    14 diseases for NPSR1:    About MalaCards
    asthma    attention deficit hyperactivity disorder    inflammatory bowel disease    atopic dermatitis
    panic disorder    allergic asthma    bronchiolitis    eczema
    rheumatoid arthritis    dermatitis    atopy    rabies
    arthritis    schizophrenia

    2 diseases from the University of Copenhagen DISEASES database for NPSR1:
    Asthma     Panic disorder

    2 Novoseek disease relationships for NPSR1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    asthma 62.5 50 18340359 (4), 15710598 (4), 15947423 (3), 18305139 (3) (see all 11)
    asthma allergic 60.1 2 17210045 (2)

    Human Genome Epidemiology (HuGE) Navigator: NPSR1 (28 documents)

    Export disorders for NPSR1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for NPSR1 gene, integrated from 9 sources (see all 69):
    (articles sorted by number of sources associating them with NPSR1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Characterization of a common susceptibility locus for asthma-related traits. (PubMed id 15073379)1, 2, 3 Laitinen T....Kere J. (2004)
    2. Haplotypes of G protein-coupled receptor 154 are associated with childhood allergy and asthma. (PubMed id 15710598)1, 2, 9 Melen E.... Nyberg F. (2005)
    3. Characterization of GPRA, a novel G protein-coupled receptor related to asthma. (PubMed id 15947423)1, 2, 9 Vendelin J....Laitinen T. (2005)
    4. G-protein-coupled receptor polymorphisms are associated with asthma in a large German population. (PubMed id 15764725)1, 2 Kormann M.S.... Kabesch M. (2005)
    5. Neuropeptide S: a neuropeptide promoting arousal and anxiolytic-like effects. (PubMed id 15312648)1, 2 Xu Y.L....Civelli O. (2004)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    7. The G protein-coupled receptor repertoires of human and mouse. (PubMed id 12679517)1, 3 Vassilatis D.K.... Gaitanaris G.A. (2003)
    8. G protein-coupled receptor 154 gene polymorphism is associated with airway hyperresponsiveness to methacholine in a Chinese population. (PubMed id 16522461)1, 9 Feng Y....Xu X. (2006)
    9. Biological and genetic interaction between tenascin C and neuropeptide S receptor 1 in allergic diseases. (PubMed id 18305139)1, 9 Orsmark-Pietras C....Kere J. (2008)
    10. Lack of association between genetic variation in G-protein-coupled receptor for asthma susceptibility and childhood asthma and atopy. (PubMed id 18340359)1, 9 Wu H....London S.J. (2008)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 387129 HGNC: 23631 AceView: GPR154 Ensembl:ENSG00000187258 euGenes: HUgn387129
    ECgene: NPSR1 H-InvDB: NPSR1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for NPSR1 Pharmacogenomics, SNPs, Pathways
    SeattleSNPshttp://pga.gs.washington.edu/data/gpr154/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for NPSR1 gene:
    Search GeneIP for patents involving NPSR1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for NPSR1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NPSR1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NPSR1  
     OriGene Protein Over-expression Lysate for NPSR1   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for NPSR1   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NPSR1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NPSR1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for NPSR1   OriGene Custom Protein Services for NPSR1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat NPSR1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing NPSR1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NPSR1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NPSR1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NPSR1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NPSR1
     GenScript Custom Purified and Recombinant Proteins Services for NPSR1 GenScript cDNA clones with any tag delivered in your preferred vector for NPSR1
     GenScript NPSR1-overexpressing Cell Line for Assay GenScript Custom Superior Antibodies Services for NPSR1
     CloneReady with Over 120,000 Genes  Gene Synthesis: Any Gene in Any Vector
     Vector-based siRNA and miRNA, Ready for Transfection Gene Mutant Library, Variants up to 10^11
     Plasmid Preparation Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in NPSR1 promoter
     Search Chromatin IP Primers for NPSR1
     RT2 qPCR Primer Assay in human, mouse, rat NPSR1
     GNC Network for NPSR1
     SABiosciences PCR Arrays including human, mouse, rat NPSR1
     Search Tocris compounds for NPSR1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     NPSR1 antibodies
     NPSR1 proteins
     NPSR1 lysates
     Antibodies for NPSR1
     See all of Abcam's Antibodies, Kits and Proteins for NPSR1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     NPSR1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for NPSR1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NPSR1
     SwitchGear 3'UTR luciferase reporter plasmids for NPSR1
     SwitchGear Promoter luciferase reporter plasmids for NPSR1
     ThermoFisher Antibodies for NPSR1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NPSR1
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for NPSR1
    Sirion Biotech Customized:
     stable knockdown cell line services for NPSR1
     inducible knockdown cell line services for NPSR1
     design and validation of potent shRNA sequences against NPSR1
     adenovirus for potent knockdown of NPSR1
     adenovirus for overexpression of NPSR1
     stable overexpressing cell line services for NPSR1
     inducible overexpressing cell line services for NPSR1
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013 , 14 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      NPSR1 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4