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Aliases & Descriptions for NPSR1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ASRT2 2 , 5 GPR154 2 , 3 , 5 GPRA 1 , 2 , 3 , 5 NPSR 2 OTTHUMP00000125228 2 OTTHUMP00000125229 2 PGR14 1 , 2 , 3 , 5 VRR1 2 , 5
Descriptions G protein-coupled receptor 154 1 , 2 G protein-coupled receptor for asthma susceptibility 2 G-protein coupled receptor 154 3 G-protein coupled receptor PGR14 3 G-protein coupled receptor for asthma susceptibility 3 neuropeptide S receptor 1 2 vasopressin receptor-related receptor 1 2
Search outside databases for aliases for NPSR1 gene
Summaries for NPSR1 (According to Entrez Gene ,
Wikipedia's
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UniProtKB/Swiss-Prot ,
and/or
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EntrezGene summary for NPSR1 : This gene is a member of the G protein-coupled receptor 1 family and encodes a plasma membraneprotein. Increased expression of this gene in ciliated cells of the respiratory epithelium and inbronchial smooth muscle cells is associated with asthma. Mutations in this gene have also beenassociated with this disease. Alternatively spliced variants which encode different proteinisoforms have been described; however, not all variants have been fully characterized. [providedby RefSeq] UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4 Function : May be active in signaling pathway in an autocrine or paracrine fashion in severaltissues. Receptor for neuropeptide S, it may mediate its action, such as inhibitory effects, oncell growth. Involved in pathogenesis of asthma and other IgE-mediated diseases
Gene Wiki entry for NPSR1 (Neuropeptide_S_receptor)
Genomic Location for NPSR1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
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UCSC and
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Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the NPSR1 gene Entrez Gene cytogenetic band: 7p14.3 Ensembl cytogenetic band: 7p14.3 HGNC cytogenetic band: 7p14.3 NPSR1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 7 GeneLoc Exon Structure
GeneLoc location for GC07P034664:
(about GC identifiers )
Start:
34,664,422 bp from pter
End:
34,884,469 bp from pter
Size:
220,048 bases
Orientation:
plus strand
1 alternative location : Chr 7+,CRA_TCAG 34,742,034-34,962,952
RefSeq DNA sequence: NC_000007.12 NT_007819.16 NT_079592.2 Proteins for NPSR1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
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R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
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Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4 (See
protein sequence )Recommended Name: Neuropeptide S receptor Size : 371 amino acids; 42687 Da
Subcellular location : Isoform 1: Cell membrane; Multi-pass membrane protein
Subcellular location : Isoform 3: Cell membrane; Multi-pass membrane protein
Subcellular location : Isoform 4: Cell membrane; Multi-pass membrane protein
Subcellular location : Isoform 2: Cytoplasm
Subcellular location : Isoform 5: Cytoplasm
Subcellular location : Isoform 6: Cytoplasm
Subcellular location : Isoform 7: Cytoplasm
Subcellular location : Isoform 9: Cytoplasm
Miscellaneous : Only isoforms with 7 transmembrane topology (isoform 1, isoform 3 and isoform 4) aretransported into the plasma membrane in transfected cells, while the truncated ones retainintracellular compartments
Secondary accessions : Q2XP58 Q56H76 Q56H77 Q56H78 Q6JSL4 Q6JSL5 Q6JSL6 Q6JSL7 Q6JSL8 Q6W5P3 Q6ZMB8Alternative splicing : 9 isoforms : Q6W5P4-1 Q6W5P4-2 Q6W5P4-3 Q6W5P4-4 Q6W5P4-5 Q6W5P4-6 Q6W5P4-7 Q6W5P4-8 Q6W5P4-9
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_997055.1 NP_997056.1 ENSEMBL proteins: ENSP00000334093 ENSP00000370965 ENSP00000370950 ENSP00000379402 ENSP00000353788 ENSP00000370955 ENSP00000370953 ENSP00000352839 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for NPSR1: Assays for NPSR1:
Protein
Domains/ Families for NPSR1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q6W5P4 ProtoNet protein and cluster: Q6W5P4
UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4 Similarity : Belongs to the G-protein coupled receptor 1 family
Gene Function for NPSR1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
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Clones , and
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Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_207172 Applied Biosystems Silencer ® siRNAs for NPSR1 Sigma-Aldrich siRNA and siRNA Panels for NPSR1 Sigma-Aldrich shRNA for NPSR1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_207172                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_207172                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_207172  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_207173 UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4 Function : May be active in signaling pathway in an autocrine or paracrine fashion in severaltissues. Receptor for neuropeptide S, it may mediate its action, such as inhibitory effects, oncell growth. Involved in pathogenesis of asthma and other IgE-mediated diseases
3 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Npsr1) :3 Gene Ontology (GO) molecular function terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0004872 receptor activity
IEA -- GO:0004930 G-protein coupled receptor activity
IEA -- GO:0005000 vasopressin receptor activity
IEA --
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Pathways & Interactions for NPSR1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for NPSR1 5/7 Interacting proteins for NPSR1 (ENSP00000370950 3 ) via UniProtKB, MINT, and/or STRING (see all 7
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007165 signal transduction
IEA -- GO:0007186 G-protein coupled receptor protein signaling pathway
IEA --
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Transcripts for NPSR1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
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non coding RNAs according to
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_207172 Sigma-Aldrich siRNA and siRNA Panels for NPSR1 Sigma-Aldrich shRNA for NPSR1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_207172 NM_207173
REFSEQ mRNAs for NPSR1 gene (2 alternative transcripts): NM_207172.1 NM_207173.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_207172 NM_207173
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_207172                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_207172                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_207172  
Additional cDNA sequence: AK172847.1 AY255536.1 AY310326.1 AY310327.1 AY310328.1 AY310329.1 AY310332.1 AY956446.1 AY956447.1 AY956448.1 BC132693.1 BC132695.1 BC144380.1
5 DOTS entries : DT.97798466 DT.75119172 DT.121106215 DT.435241 DT.102832532
14 AceView cDNA sequences :AY310328 AY310331 AY310332 AY310327 AY310330 NM_207172 NM_207173 AY255536 AY310326 AY310329 CD673194 BM828553 AK172847 AI500347
highest scoring ESTs for NPSR1 :AY310327 AY310328 AI500347 NM_207172 NM_207173 AY255536 AY310329 CD673194 AA004400 AA608722
Unigene Cluster for NPSR1: Neuropeptide S receptor 1 Hs.652373 [show with all ESTs ] Unigene Representative Sequence: AY310326 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for NPSR1 ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 SP1 :         -               SP2 :         -   -             SP3 :       -   -               SP4 :       -   -   -             SP5 :                      
About this scheme ECgene alternative splicing isoforms for NPSR1 8 Ensembl transcripts including schematic representations : ENST00000334481
ENST00000381553
ENST00000381539
ENST00000396095
ENST00000360581
ENST00000381544
ENST00000381542
ENST00000359791
Expression for NPSR1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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NPSR1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for NPSR1 1 / 3 Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.652373
UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4 Tissue specificity : Ubiquitous. Isoform 1 is predominantly expressed in smooth muscle, and isoform4 is predominantly expressed in epithelial cells. In bronchial biopsies, isoform 4 is expressed insmooth muscle cells of asthma patients, but not in control patients; whereas in epithelial cells,isoform 4 expression is consistently stronger in asthma patients
Orthologs for NPSR1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for NPSR1 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for NPSR1 ENSEMBL Gene Tree for NPSR1 Paralogs for NPSR1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for NPSR1 gene AVPR2 2 GPR19 2
SNPs/Variants for NPSR1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for NPSR1 (up to first 250kb)
Disorders & Mutations for NPSR1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
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and/or TGDB .)
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OMIM: 608595 disorders : 608584 UniProtKB/Swiss-Prot: NPSR1_HUMAN, Q6W5P4
NPSR1 is associated with susceptibility to asthma and elevated serum IgE levels[MIM:608584]. Polymorphisms may influence the development of asthma and bronchialhyperresponsiveness in adult, and are significantly associated with allergic sensitization andrhinoconjunctivis, as well as asthma in children
2 Novoseek disease relationships for NPSR1 gene
About this table Human Gene Mutation Database : NPSR1 Human Genome Epidemiology Navigator: NPSR1 (14 documents)
Medical News for NPSR1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for NPSR1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/37 PubMed articles for NPSR1 gene (see all 37
): Characterization of a common susceptibility locus for asthma-related traits. (PubMed id 15073379) 2, 3, 4 Laitinen T....Kere J. (2004) Characterization of GPRA, a novel G protein-coupled receptor related to asthma. (PubMed id 15947423) 1, 3, 4 Vendelin J....Laitinen T. (2005) Haplotypes of G protein-coupled receptor 154 are associated with childhood allergy and asthma. (PubMed id 15710598) 1, 3, 4 Melen E.... Nyberg F. (2005) G-protein-coupled receptor polymorphisms are associated with asthma in a large German population. (PubMed id 15764725) 3, 4 Kormann M.S.... Kabesch M. (2005) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 3, 4 Ota T....Sugano S. (2004) The G protein-coupled receptor repertoires of human and mouse. (PubMed id 12679517) 2, 3 Vassilatis D.K.... Gaitanaris G.A. (2003) G protein-coupled receptor 154 gene polymorphism is associated with airway hyperresponsiveness to methacholine in a Chinese population. (PubMed id 16522461) 1, 3 Feng Y....Xu X. (2006) Biological and genetic interaction between tenascin C and neuropeptide S receptor 1 in allergic diseases. (PubMed id 18305139) 1, 3 Orsmark-Pietras C....Kere J. (2008) Lack of association between genetic variation in G-protein-coupled receptor for asthma susceptibility and childhood asthma and atopy. (PubMed id 18340359) 1, 3 Wu H....London S.J. (2008) Elucidation of signaling properties of vasopressin receptor-related receptor 1 by using the chimeric receptor approach. (PubMed id 14757815) 1, 3 Gupte J....Tian H. (2004)
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Genome Databases showing NPSR1
(According to
Entrez Gene ,
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AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing NPSR1
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Specialized Databases showing NPSR1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
SeattleSNPs http://pga.gs.washington.edu/data/gpr154/
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-- Services for NPSR1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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