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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

NPS Gene

protein-coding   GIFtS: 41
GCID: GC10P129347

Neuropeptide S

  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
Neuropeptide S1 2
Prepro-Neuropeptide S1 2

External Ids:    HGNC: 339401   Entrez Gene: 5948572   Ensembl: ENSG000002142857   OMIM: 6095135   UniProtKB: P0C0P63   

Export aliases for NPS gene to outside databases

Previous GC identifers: GC10U900621 GC10P129237 GC10P122920


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

GeneCards Summary for NPS Gene: 
NPS (neuropeptide S) is a protein-coding gene. Diseases associated with NPS include gastrointestinal system disease, and wolfram syndrome, and among its related super-pathways are Signaling by GPCR and GPCR ligand binding.

UniProtKB/Swiss-Prot: NPS_HUMAN, P0C0P6
Function: Modulates arousal and anxiety. May play an important anorexigenic role. Binds to its receptor NPSR1 with
nanomolar affinity to increase intracellular calcium concentrations (By similarity)

Gene Wiki entry for NPS (Neuropeptide S) Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000010.10  NC_018921.2  NT_008818.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the NPS gene promoter:
         TBP   C/EBPbeta   HOXA3   CUTL1   FOXL1   Pax-3   S8   FOXO1a   Cart-1   FOXO1   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for NPS

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NPS


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10q26.2   Ensembl cytogenetic band:  10q26.2   HGNC cytogenetic band: 10q26.2

NPS Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NPS gene location

GeneLoc information about chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10P129347:  view genomic region     (about GC identifiers)

Start:
129,347,613 bp from pter      End:
129,350,935 bp from pter
Size:
3,323 bases      Orientation:
plus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: NPS_HUMAN, P0C0P6 (See protein sequence)
Recommended Name: Neuropeptide S precursor  
Size: 89 amino acids; 10103 Da
Subcellular location: Secreted

Explore the universe of human proteins at neXtProt for NPS: NX_P0C0P6

Explore proteomics data for NPS at MOPED 

NPS Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

NPS Protein Expression

REFSEQ proteins: NP_001025184.1  
ENSEMBL proteins: 
 ENSP00000381105  
Reactome Protein details: P0C0P6
Human Recombinant Protein Products for NPS: 
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Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005576extracellular region TAS--

NPS for ontologies           About GeneDecksing



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(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section
HGNC Gene Families: 
ENDOLIG: Endogenous ligands

ProtoNet protein and cluster: P0C0P6


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
About This Section

Molecular Function:

     UniProtKB/Swiss-Prot Summary: NPS_HUMAN, P0C0P6
Function: Modulates arousal and anxiety. May play an important anorexigenic role. Binds to its receptor NPSR1 with
nanomolar affinity to increase intracellular calcium concentrations (By similarity)

Animal Models:

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(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
About This Section

SuperPaths for NPS About                                                                                                See pathways by source

SuperPathContained pathways About
1Signaling by GPCR
Signaling by GPCR0.90
Signal Transduction0.55
GPCR downstream signaling0.90
2Class A/1 (Rhodopsin-like receptors)
Class A/1 (Rhodopsin-like receptors)0.71
Peptide ligand-binding receptors0.60
GPCR ligand binding0.71
3G alpha (q) signalling events
Gastrin-CREB signalling pathway via PKC and MAPK0.90
G alpha (q) signalling events0.90
4Prostacyclin signalling through prostacyclin receptor
G alpha (s) signalling events0.31

Pathways by source                                                                                                                                                                 See SuperPaths
Show all pathways


5/9        Reactome Pathways for NPS (see all 9)
    GPCR downstream signaling
Peptide ligand-binding receptors
Gastrin-CREB signalling pathway via PKC and MAPK
Signaling by GPCR
GPCR ligand binding



NPS for pathways           About GeneDecksing

Interactions:

    SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for NPS

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

5/183 Interacting proteins for NPS (ENSP000003811054) via UniProtKB, MINT, STRING, and/or I2D (see all 183)
InteractantInteraction Details
GeneCardExternal ID(s)
ADMENSP000002781754STRING: ENSP00000278175
ADRB1ENSP000003583014STRING: ENSP00000358301
APPENSP000002849814STRING: ENSP00000284981
AVPR2ENSP000003380724STRING: ENSP00000338072
CASRENSP000002961544STRING: ENSP00000296154
About this table

Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0007218neuropeptide signaling pathway IEA--
GO:0008542visual learning IEA--
GO:0032230positive regulation of synaptic transmission, GABAergic IEA--
GO:0045760positive regulation of action potential IEA--
GO:0051968positive regulation of synaptic transmission, glutamatergic IEA--

NPS for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section
Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for NPS

Search CenterWatch for drugs/clinical trials and news about NPS

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for NPS gene: 
NM_001030013.1  

Unigene Cluster for NPS:

Neuropeptide S
Hs.643423
Unigene Representative Sequence: NM_001030013
1 Ensembl transcript including schematic representation, and UCSC links where relevant:
ENST00000398023(uc001ljx.1)
miRNA
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Inhib. RNA
Products:
     
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Clone
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Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NPS
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Primer
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  QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NPS
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GeneLoc Exon Structure


(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

NPS expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>2/3
CGAP TAG: ACTAAGTGTG
NPS Expression
About this image


See NPS Protein Expression from SPIRE MOPED and PaxDB
SOURCE GeneReport for Unigene cluster: Hs.643423
    SABiosciences Custom PCR Arrays for NPS
Primer
Products:
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In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NPS

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for NPS gene from 2/7 species (see all 7)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
mouse
(Mus musculus)
Mammalia Nps1 , 5 neuropeptide S1, 5 81.44(n)1
73.86(a)1
  7 (81.27 cM)5
1000432541  NM_001163611.11  NP_001157083.11 
 1352686195 
lizard
(Anolis carolinensis)
Reptilia NPS6
Uncharacterized protein
67(a)
1 ↔ 1
3(53569447-53569635)


ENSEMBL Gene Tree for NPS (if available)
TreeFam Gene Tree for NPS (if available)

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
  --

(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

10/186 SNPs in NPS are shown (see all 186)    About this table     
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 10 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs591215431,2
C--122919006(+) CCTGC-/ATGC/ATGCGT/ATGCGTGT/AT
GCGTGTGTGT
/ATGCGTGTGTGTGT
gtgtg
3 -- us2k1 cds10--------
rs115975031,2
C,F,H--129345622(+) atggcG/Acatgg 1 -- us2k114Minor allele frequency- A:0.10NS EA NA WA CSA 627
rs1918009751,2
--129345631(+) GGTCCC/TAGCTA 1 -- us2k10--------
rs1500409211,2
--129345685(+) AGGCTA/GCAGTG 1 -- us2k10--------
rs1840120401,2
--129345784(+) CTCCTA/GCCAAT 1 -- us2k10--------
rs110181891,2
C,F,H--129345788(+) TGCCAA/GTTCTA 1 -- us2k122Minor allele frequency- G:0.12NS EA NA WA 2766
rs1453945201,2
--129345871(+) TTTCCA/GCTTAA 1 -- us2k10--------
rs1903128451,2
--129345906(+) CTACAG/TGCAAA 1 -- us2k10--------
rs2013427121,2
--129346016(+) GTTCC-/TGCA  
        
TGCGT
1 -- us2k10--------
rs78980561,2
C--129346020(+) CCtgcA/C/Gtgtgt 1 -- us2k12CSA 3

HapMap Linkage Disequilibrium report for NPS (129347613 - 129350935 bp)

Structural Variations
     Database of Genomic Variants (DGV) 1 variation for NPS:    About this table     
Variant IDTypeSubtypePubMed ID
nsv7607CNV Loss18451855

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section
OMIM gene information: 609513    OMIM disorders: --

14 diseases for NPS:    About MalaCards
gastrointestinal system disease    wolfram syndrome    pthirus pubis infestation    sleep apnea
encephalomyopathy    mitochondrial encephalomyopathy    leber hereditary optic neuropathy    optic atrophy
anorexia nervosa    skin disease    rhinitis    neuropathy
dementia    asthma

15 diseases from the University of Copenhagen DISEASES database for NPS:
Migraine     Asthma     Pain agnosia     Complex regional pain syndrome
Rhinitis     Sleep disorder     Dermatitis     Alzheimer's disease
Schizophrenia     Vascular disease     Arthritis     Psoriasis
Diabetes mellitus     Kidney failure     Fibromyalgia

NPS for disorders           About GeneDecksing

Genetic Association Database (GAD): NPS
Human Genome Epidemiology (HuGE) Navigator: NPS (18 documents)

Export disorders for NPS gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

PubMed articles for NPS gene, integrated from 9 sources (see all 20):
(articles sorted by number of sources associating them with NPS)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Neuropeptide S: a neuropeptide promoting arousal and anxiolytic-like effects. (PubMed id 15312648)1, 2, 3 Xu Y.L....Civelli O. (2004)
  2. Assessment of the neuropeptide S system in anxiety di sorders. (PubMed id 20705147)1, 4 Donner J....Hovatta I. (2010)
  3. Coeliac disease associated risk variants in TNFAIP3 and REL implicate altered NF-{kappa}B signalling. (PubMed id 19240061)1, 4 Trynka G....Wijmenga C. (2009)
  4. Synthesis and biological activity of human neuropeptide S analogues modified in position 2. (PubMed id 18181564)1, 3 Camarda V....Salvadori S. (2008)
  5. Neuropeptide S stimulates human monocyte chemotaxis vi a NPS receptor activation. (PubMed id 23142110)1 Filaferro M....Vitale G. (2013)
  6. Neurobiology, pharmacology, and medicinal chemistry o f neuropeptide S and its receptor. (PubMed id 19824051)1 Guerrini R....Calo' G. (2010)
  7. Non-synonymous polymorphism in the neuropeptide S pre cursor gene and sleep apnea. (PubMed id 20405330)1 SA!nchez-de-la-Torre M....BarbAc F. (2010)
  8. Genome-wide association identifies the ABO blood grou p as a major locus associated with serum levels of soluble E-selectin. (PubMed id 19729612)4 Paterson A.D....Bull S.B. (2009)
  9. Neuropeptide S is a stimulatory anxiolytic agent: a behavioural study in mice. (PubMed id 18376418)1 Rizzi A....Calo G. (2008)
  10. Downstream target genes of the neuropeptide S-NPSR1 pathway. (PubMed id 16926187)1 Vendelin J....Kere J. (2006)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section
 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section
Entrez Gene: 594857 HGNC: 33940 Ensembl:ENSG00000214285 euGenes: HUgn594857 ECgene: NPS
H-InvDB: NPS

(According to HUGE)
About This Section
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
NameDescription
PharmGKB entry for NPS Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section
Patent Information for NPS gene:
Search GeneIP for patents involving NPS

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Sirion Biotech, Cell lines from GenScript, and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
About This Section

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 QIAGEN SeqTarget long-range PCR primers for resequencing NPS
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 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NPS
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 GenScript Custom Purified and Recombinant Proteins Services for NPS GenScript cDNA clones with any tag delivered in your preferred vector for NPS
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 Regulatory tfbs in NPS promoter
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 RT2 qPCR Primer Assay in human, mouse, rat NPS
 GNC Network for NPS
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 Search Tocris compounds for NPS
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 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
 Novus Biologicals
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 See all of Abcam's Antibodies, Kits and Proteins for NPS
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 Proteins for NPS
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 Browse SwitchGear Promoter luciferase reporter plasmids for NPS
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 Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NPS
 inGenious Targeting Laboratory - Custom generated mouse model solutions for NPS
 inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for NPS
Customized:
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Customized transgenic rodents for:
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GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 4 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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(GIFtS: 73)
transforming growth factor, beta 1
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The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

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