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Aliases for NPPA-AS1 Gene

Subcategory (RNA class) for NPPA-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for NPPA-AS1 Gene

  • NPPA Antisense RNA 1 2 3
  • NPPA Antisense RNA 1 (Non-Protein Coding) 2 3
  • NPPA Antisense RNA (Non-Protein Coding) 2 3
  • NPPA-AS 3
  • NPPAAS 3

External Ids for NPPA-AS1 Gene

ORGUL Members for NPPA-AS1 Gene

Previous Symbols for NPPA-AS1 Gene

  • NPPAAS
  • NPPA-AS

Summaries for NPPA-AS1 Gene

GeneCards Summary for NPPA-AS1 Gene

NPPA-AS1 (NPPA Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPPA-AS1 Gene

Genomics for NPPA-AS1 Gene

Genomic Location for NPPA-AS1 Gene

Start:
11,840,319 bp from pter
End:
11,848,079 bp from pter
Size:
7,761 bases
Orientation:
Plus strand

Genomic View for NPPA-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NPPA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPPA-AS1 Gene

No data available for Regulatory Elements for NPPA-AS1 Gene

Proteins for NPPA-AS1 Gene

Post-translational modifications for NPPA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPPA-AS1 Gene

Domains for NPPA-AS1 Gene

Gene Families for NPPA-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with NPPA-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for NPPA-AS1 Gene

Function for NPPA-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NPPA-AS1 Gene

Localization for NPPA-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for NPPA-AS1 Gene

Pathways for NPPA-AS1 Gene

SuperPathways for NPPA-AS1 Gene

No Data Available

Interacting Proteins for NPPA-AS1 Gene

Gene Ontology (GO) - Biological Process for NPPA-AS1 Gene

None

No data available for Pathways by source for NPPA-AS1 Gene

Compounds for NPPA-AS1 Gene

(3) PharmGKB related drug/compound annotations for NPPA-AS1 Gene

Drug/compound Annotation
bumetanide CA
furosemide CA
torasemide CA
genes like me logo Genes that share compounds with NPPA-AS1: view

Transcripts for NPPA-AS1 Gene

mRNA/cDNA for NPPA-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPPA-AS1 Gene

No ASD Table

Relevant External Links for NPPA-AS1 Gene

GeneLoc Exon Structure for
NPPA-AS1
ECgene alternative splicing isoforms for
NPPA-AS1

Expression for NPPA-AS1 Gene

mRNA expression in normal human tissues for NPPA-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NPPA-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (51.2).
genes like me logo Genes that share expressions with NPPA-AS1: view

Orthologs for NPPA-AS1 Gene

Evolution for NPPA-AS1 Gene

ENSEMBL:
Gene Tree for NPPA-AS1 (if available)
TreeFam:
Gene Tree for NPPA-AS1 (if available)

No data available for Orthologs for NPPA-AS1 Gene

Paralogs for NPPA-AS1 Gene

No data available for Paralogs for NPPA-AS1 Gene

Variants for NPPA-AS1 Gene

Sequence variations from dbSNP and Humsavar for NPPA-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs198357 -- 11,843,828(-) TCTGT(G/T)TGTGG nc-transcript-variant
rs198358 -- 11,844,019(-) GGAAC(A/G)GCCAC nc-transcript-variant
rs198359 -- 11,844,127(+) CAGTT(C/T)CATTC intron-variant
rs198360 -- 11,844,512(+) AGTGC(C/T)GAAGG intron-variant
rs7552330 -- 11,844,035(+) TGGTC(A/G)CAGCC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for NPPA-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv871919 CNV Loss 21882294
nsv527521 CNV Loss 19592680

Relevant External Links for NPPA-AS1 Gene

HapMap Linkage Disequilibrium report
NPPA-AS1

Disorders for NPPA-AS1 Gene

No disorders were found for NPPA-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for NPPA-AS1 Gene

Publications for NPPA-AS1 Gene

  1. Natural antisense transcript of natriuretic peptide precursor A (NPPA): structural organization and modulation of NPPA expression. (PMID: 19671135) Annilo T. … Laan M. (BMC Mol. Biol. 2009) 2 3
  2. Genome-wide association analysis and fine mapping of NT-proBNP level provide novel insight into the role of the MTHFR-CLCN6-NPPA-NPPB gene cluster. (PMID: 21273288) Del Greco M F. … Pramstaller P.P. (Hum. Mol. Genet. 2011) 3

Products for NPPA-AS1 Gene

Sources for NPPA-AS1 Gene

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