Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NPM1P6 Gene

Aliases for NPM1P6 Gene

  • Nucleophosmin 1 Pseudogene 6 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 6 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 6 3
  • NG6-4 3
  • NPMP6 3

External Ids for NPM1P6 Gene

Previous HGNC Symbols for NPM1P6 Gene

  • NPMP6

Previous GeneCards Identifiers for NPM1P6 Gene

  • GC00U990239
  • GC08U900216
  • GC08P062164
  • GC08P062278

Summaries for NPM1P6 Gene

GeneCards Summary for NPM1P6 Gene

NPM1P6 (Nucleophosmin 1 Pseudogene 6) is a Pseudogene.

Additional gene information for NPM1P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPM1P6 Gene

Genomics for NPM1P6 Gene

GeneHancer (GH) Regulatory Elements for NPM1P6 Gene

Promoters and enhancers for NPM1P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I061706 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 +509.4 509412 10.2 HDGF PKNOX1 CLOCK FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ASPH NPM1P6 MIR4470 GC08P061662
GH08I060713 Enhancer 1.2 FANTOM5 Ensembl ENCODE 14.3 -487.6 -487565 2.7 CTCF MAX SIN3A ZIC2 YY1 E2F1 ELK1 POLR2A PATZ1 SCRT2 NPM1P6 CHD7 ENSG00000254432
GH08I060619 Enhancer 1.3 UCNEbase ENCODE 12 -582.2 -582239 0.9 PKNOX1 SMAD1 FEZF1 ZNF2 ZNF213 ATF7 KLF7 RUNX3 ZNF214 JUNB NPM1P6 LINC01301 CLVS1 ENSG00000228862 GC08P060601 RAB2A
GH08I060925 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.2 -274.5 -274473 5.3 PKNOX1 SMAD1 BMI1 BATF RAD21 KLF5 IRF4 ZNF207 ZNF143 ATF7 CHD7 CLVS1 NPM1P6 NASPP1 ENSG00000254777 LOC105375938
GH08I061755 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.3 +557.8 557782 8.7 ARNT SIN3A CBX5 E2F8 ZNF143 FOS SP3 REST SMARCB1 ZNF592 ASPH NPM1P6 ENSG00000251127 MIR4470
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NPM1P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P6 Gene

Genomic Locations for NPM1P6 Gene
chr8:61,202,255-61,203,545
(GRCh38/hg38)
Size:
1,291 bases
Orientation:
Plus strand
chr8:62,114,814-62,116,104
(GRCh37/hg19)

Genomic View for NPM1P6 Gene

Genes around NPM1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P6 Gene

Proteins for NPM1P6 Gene

Post-translational modifications for NPM1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P6 Gene

Domains & Families for NPM1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPM1P6 Gene

Function for NPM1P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P6 Gene

Localization for NPM1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P6 Gene

Pathways & Interactions for NPM1P6 Gene

SuperPathways for NPM1P6 Gene

No Data Available

Interacting Proteins for NPM1P6 Gene

Gene Ontology (GO) - Biological Process for NPM1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPM1P6 Gene

Drugs & Compounds for NPM1P6 Gene

No Compound Related Data Available

Transcripts for NPM1P6 Gene

mRNA/cDNA for NPM1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P6 Gene

No ASD Table

Relevant External Links for NPM1P6 Gene

GeneLoc Exon Structure for
NPM1P6
ECgene alternative splicing isoforms for
NPM1P6

Expression for NPM1P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPM1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPM1P6 Gene:

NPM1P6
genes like me logo Genes that share expression patterns with NPM1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P6 Gene

Orthologs for NPM1P6 Gene

Evolution for NPM1P6 Gene

ENSEMBL:
Gene Tree for NPM1P6 (if available)
TreeFam:
Gene Tree for NPM1P6 (if available)

No data available for Orthologs for NPM1P6 Gene

Paralogs for NPM1P6 Gene

No data available for Paralogs for NPM1P6 Gene

Variants for NPM1P6 Gene

Additional Variant Information for NPM1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P6 Gene

Disorders for NPM1P6 Gene

Additional Disease Information for NPM1P6

Genetic Association Database
(GAD)

No disorders were found for NPM1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NPM1P6 Gene

Publications for NPM1P6 Gene

  1. Characterization of seven processed pseudogenes of nucleophosmin/B23 in the human genome. (PMID: 8471164) Liu QR … Chan PK (DNA and cell biology 1993) 2 3 58
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 44 58

Products for NPM1P6 Gene

Sources for NPM1P6 Gene

Content
Loading form....