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Aliases for NPM1P6 Gene

Aliases for NPM1P6 Gene

  • Nucleophosmin 1 Pseudogene 6 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 6 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 6 3
  • NG6-4 3
  • NPMP6 3

External Ids for NPM1P6 Gene

Previous HGNC Symbols for NPM1P6 Gene

  • NPMP6

Previous GeneCards Identifiers for NPM1P6 Gene

  • GC00U990239
  • GC08U900216
  • GC08P062164
  • GC08P062278

Summaries for NPM1P6 Gene

GeneCards Summary for NPM1P6 Gene

NPM1P6 (Nucleophosmin 1 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPM1P6 Gene

Genomics for NPM1P6 Gene

Regulatory Elements for NPM1P6 Gene

Enhancers for NPM1P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F060713 1.4 FANTOM5 Ensembl ENCODE 14.3 -487.4 -487425 3.0 YY1 ELK1 SCRT2 ZNF143 ZNF202 HCFC1 CEBPB JUNB ELF1 SMARCA4 NPM1P6 CHD7 ENSG00000254432
GH08F060515 0.5 ENCODE 11.2 -684.7 -684691 4.0 ATF1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF48 ZNF2 GTF3C2 GLIS2 RAB2A ENSG00000255321 NPM1P6 PIR33286
GH08F061706 1.5 FANTOM5 Ensembl ENCODE 10.3 +509.2 509240 10.6 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 NPM1P6 ASPH ENSG00000283485
GH08F061755 0.8 Ensembl ENCODE 10.3 +557.8 557783 8.7 ARNT SIN3A ZNF143 FOS KLF13 SP3 JUNB SMARCB1 KAT8 MEF2D ASPH NPM1P6 ENSG00000251127 MIR4470
GH08F061094 0.8 ENCODE 10.2 -107.6 -107599 0.2 ZNF157 ZNF548 CLVS1 NPM1P6 GC08M061136 GC08P061042
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NPM1P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for NPM1P6 Gene

Chromosome:
8
Start:
61,202,255 bp from pter
End:
61,203,545 bp from pter
Size:
1,291 bases
Orientation:
Plus strand

Genomic View for NPM1P6 Gene

Genes around NPM1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P6 Gene

Proteins for NPM1P6 Gene

Post-translational modifications for NPM1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P6 Gene

Domains & Families for NPM1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPM1P6 Gene

Function for NPM1P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P6 Gene

Localization for NPM1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NPM1P6 Gene

Pathways & Interactions for NPM1P6 Gene

SuperPathways for NPM1P6 Gene

No Data Available

Interacting Proteins for NPM1P6 Gene

Gene Ontology (GO) - Biological Process for NPM1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPM1P6 Gene

Transcripts for NPM1P6 Gene

mRNA/cDNA for NPM1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P6 Gene

No ASD Table

Relevant External Links for NPM1P6 Gene

GeneLoc Exon Structure for
NPM1P6
ECgene alternative splicing isoforms for
NPM1P6

Expression for NPM1P6 Gene

mRNA expression in normal human tissues for NPM1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPM1P6 Gene:

NPM1P6
genes like me logo Genes that share expression patterns with NPM1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NPM1P6 Gene

Orthologs for NPM1P6 Gene

Evolution for NPM1P6 Gene

ENSEMBL:
Gene Tree for NPM1P6 (if available)
TreeFam:
Gene Tree for NPM1P6 (if available)

No data available for Orthologs for NPM1P6 Gene

Paralogs for NPM1P6 Gene

No data available for Paralogs for NPM1P6 Gene

Variants for NPM1P6 Gene

Relevant External Links for NPM1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P6 Gene

Disorders for NPM1P6 Gene

Relevant External Links for NPM1P6

Genetic Association Database (GAD)
NPM1P6

No disorders were found for NPM1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NPM1P6 Gene

Publications for NPM1P6 Gene

  1. Characterization of seven processed pseudogenes of nucleophosmin/B23 in the human genome. (PMID: 8471164) Liu Q.R. … Chan P.K. (DNA Cell Biol. 1993) 2 3 64
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64

Products for NPM1P6 Gene

Sources for NPM1P6 Gene

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