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Aliases for NPIPP1 Gene

Aliases for NPIPP1 Gene

  • Nuclear Pore Complex Interacting Protein Pseudogene 1 2 3 5

External Ids for NPIPP1 Gene

Previous GeneCards Identifiers for NPIPP1 Gene

  • GC00U930285
  • GC16M015203
  • GC16M015204
  • GC16M015205
  • GC16M015206
  • GC16M015208

Summaries for NPIPP1 Gene

GeneCards Summary for NPIPP1 Gene

NPIPP1 (Nuclear Pore Complex Interacting Protein Pseudogene 1) is a Pseudogene.

Additional gene information for NPIPP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPIPP1 Gene

Genomics for NPIPP1 Gene

GeneHancer (GH) Regulatory Elements for NPIPP1 Gene

Promoters and enhancers for NPIPP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I014283 Enhancer 1.3 Ensembl ENCODE 55.2 +838.1 838094 3.7 MLX ZFP64 IRF4 YY1 SLC30A9 ZNF213 ZNF143 SP3 SSRP1 ZNF610 GC16P014288 TRT-CGT2-1 ENSG00000183458 NPIPA3 NPIPP1 NPIPA1 LOC100505915 NPIPA2 PARN PKD1P6
GH16I014337 Enhancer 1.3 Ensembl ENCODE dbSUPER 32.8 +785.6 785634 1 FOXA2 MLX ZFP64 ARID4B YBX1 DMAP1 ZNF48 YY1 RXRA YY2 ENSG00000183458 PARN NPIPA2 LOC100505915 NPIPA3 NPIPA1 NPIPP1 ERCC4 ENSG00000261819 PKD1P6
GH16I014973 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.2 +148.2 148177 2.8 PKNOX1 CLOCK ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 PDXDC1 NPIPA2 ENSG00000183458 NPIPA3 NPIPA1 PARN LOC100505915 NPIPA5 ENSG00000261819 BFAR
GH16I015638 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.8 -519.5 -519489 9 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF143 SP3 SSRP1 GLIS1 GC16P015643 MARF1 NDE1 MIR484 ENSG00000263335 ENSG00000183458 PKD1P1 LOC100505915 PKD1P6 ENSG00000227827
GH16I015792 Enhancer 0.8 dbSUPER 19.2 -670.2 -670180 3.4 SMAD1 ZNF473 NFIB INSM2 ZNF195 ZBTB40 NCOA2 ZNF121 ZNF366 ZNF350 ENSG00000280429 ENSG00000183458 PKD1P1 LOC100505915 ENSG00000277920 FOPNL NPIPA1 PKD1P6 NPIPA5 NPIPP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NPIPP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPIPP1 Gene

Genomic Locations for NPIPP1 Gene
19,201 bases
Minus strand

Genomic View for NPIPP1 Gene

Genes around NPIPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPIPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPIPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPIPP1 Gene

Proteins for NPIPP1 Gene

Post-translational modifications for NPIPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPIPP1 Gene

Domains & Families for NPIPP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPIPP1 Gene

Function for NPIPP1 Gene

Phenotypes From GWAS Catalog for NPIPP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPIPP1 Gene

Localization for NPIPP1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for NPIPP1 gene
Compartment Confidence
plasma membrane 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPIPP1 Gene

Pathways & Interactions for NPIPP1 Gene

SuperPathways for NPIPP1 Gene

No Data Available

Interacting Proteins for NPIPP1 Gene

Gene Ontology (GO) - Biological Process for NPIPP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NPIPP1 Gene

Drugs & Compounds for NPIPP1 Gene

No Compound Related Data Available

Transcripts for NPIPP1 Gene

mRNA/cDNA for NPIPP1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPIPP1 Gene

No ASD Table

Relevant External Links for NPIPP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NPIPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPIPP1 Gene

mRNA differential expression in normal tissues according to GTEx for NPIPP1 Gene

This gene is overexpressed in Brain - Cerebellum (x6.1) and Brain - Cerebellar Hemisphere (x5.5).

NURSA nuclear receptor signaling pathways regulating expression of NPIPP1 Gene:

genes like me logo Genes that share expression patterns with NPIPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPIPP1 Gene

Orthologs for NPIPP1 Gene

Evolution for NPIPP1 Gene

Gene Tree for NPIPP1 (if available)
Gene Tree for NPIPP1 (if available)

No data available for Orthologs for NPIPP1 Gene

Paralogs for NPIPP1 Gene

No data available for Paralogs for NPIPP1 Gene

Variants for NPIPP1 Gene

Additional Variant Information for NPIPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPIPP1 Gene

Disorders for NPIPP1 Gene

No disorders were found for NPIPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPIPP1 Gene

Publications for NPIPP1 Gene

No publications were found for NPIPP1 Gene.

Products for NPIPP1 Gene

Sources for NPIPP1 Gene

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