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Aliases for NPIPP1 Gene

Aliases for NPIPP1 Gene

  • Nuclear Pore Complex Interacting Protein Pseudogene 1 2 3 5

External Ids for NPIPP1 Gene

Previous GeneCards Identifiers for NPIPP1 Gene

  • GC00U930285
  • GC16M015203
  • GC16M015204
  • GC16M015205
  • GC16M015206
  • GC16M015208

Summaries for NPIPP1 Gene

GeneCards Summary for NPIPP1 Gene

NPIPP1 (Nuclear Pore Complex Interacting Protein Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPIPP1 Gene

Genomics for NPIPP1 Gene

Regulatory Elements for NPIPP1 Gene

Enhancers for NPIPP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F014283 1.4 Ensembl ENCODE 5.7 +838.1 838094 3.7 PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A ZNF2 SLC30A9 ZNF143 ZNF207 BFAR ENSG00000183458 LOC100505915 ENSG00000263234 LOC105371095 ENSG00000270734 NPIPA3 ENSG00000207425 NPIPA2 MIR193BHG
GH16F014300 1.5 FANTOM5 ENCODE 5.1 +817.3 817300 10.9 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A YBX1 DMAP1 ZNF2 MIR193BHG NPIPP1 MKL2 GC16P014304 MIR365A
GH16F015140 1.4 FANTOM5 Ensembl ENCODE 4.8 -21.2 -21237 8.9 ZNF76 KLF17 ZNF121 GLIS2 ZNF366 SCRT2 SP3 ZEB2 ZFP69B ZNF341 LOC100505915 PDXDC1 NPIPA2 NPIPP1 GC16P015150 MIR6511B2
GH16F014362 1.3 Ensembl ENCODE 4.9 +759.2 759166 3.3 ATF1 MLX ARID4B SIN3A DMAP1 ZNF48 SLC30A9 FOS SP5 NFYC NOMO1 NPIPP1 LOC105447648 GC16M014339
GH16F015509 1.1 Ensembl ENCODE 5.1 -386.4 -386384 1.8 HDAC1 CTCF LEF1 ZMYM3 MAX CEBPG ZBTB40 ZIC2 RAD21 ZNF664 C16orf45 RRN3 NPIPP1 LOC105371102
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NPIPP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NPIPP1 Gene

15,104,298 bp from pter
15,123,498 bp from pter
19,201 bases
Minus strand

Genomic View for NPIPP1 Gene

Genes around NPIPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPIPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPIPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPIPP1 Gene

Proteins for NPIPP1 Gene

Post-translational modifications for NPIPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPIPP1 Gene

Domains & Families for NPIPP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPIPP1 Gene

Function for NPIPP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPIPP1 Gene

Localization for NPIPP1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for NPIPP1 gene
Compartment Confidence
plasma membrane 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for NPIPP1 Gene

Pathways & Interactions for NPIPP1 Gene

SuperPathways for NPIPP1 Gene

No Data Available

Interacting Proteins for NPIPP1 Gene

Gene Ontology (GO) - Biological Process for NPIPP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NPIPP1 Gene

Transcripts for NPIPP1 Gene

mRNA/cDNA for NPIPP1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPIPP1 Gene

No ASD Table

Relevant External Links for NPIPP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NPIPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NPIPP1 Gene

mRNA differential expression in normal tissues according to GTEx for NPIPP1 Gene

This gene is overexpressed in Brain - Cerebellum (x6.1) and Brain - Cerebellar Hemisphere (x5.5).

NURSA nuclear receptor signaling pathways regulating expression of NPIPP1 Gene:

genes like me logo Genes that share expression patterns with NPIPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NPIPP1 Gene

Orthologs for NPIPP1 Gene

Evolution for NPIPP1 Gene

Gene Tree for NPIPP1 (if available)
Gene Tree for NPIPP1 (if available)

No data available for Orthologs for NPIPP1 Gene

Paralogs for NPIPP1 Gene

No data available for Paralogs for NPIPP1 Gene

Variants for NPIPP1 Gene

Relevant External Links for NPIPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPIPP1 Gene

Disorders for NPIPP1 Gene

No disorders were found for NPIPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPIPP1 Gene

Publications for NPIPP1 Gene

No publications were found for NPIPP1 Gene.

Products for NPIPP1 Gene

Sources for NPIPP1 Gene

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