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Aliases for NPIPB7 Gene

Aliases for NPIPB7 Gene

  • Nuclear Pore Complex Interacting Protein Family, Member B7 2 3
  • Nuclear Pore Complex Interacting Protein-Like 1 2 3
  • Nuclear Pore Complex-Interacting Protein-Like 1 3 4
  • NPIPL1 3 4
  • A-575C2.4 3
  • A-761H5.5 3

External Ids for NPIPB7 Gene

Previous Symbols for NPIPB7 Gene

  • NPIPL1

Summaries for NPIPB7 Gene

GeneCards Summary for NPIPB7 Gene

NPIPB7 (Nuclear Pore Complex Interacting Protein Family, Member B7) is a Pseudogene. An important paralog of this gene is NPIPB11.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPIPB7 Gene

Genomics for NPIPB7 Gene

Genomic Location for NPIPB7 Gene

Start:
28,456,372 bp from pter
End:
28,471,296 bp from pter
Size:
14,925 bases
Orientation:
Minus strand

Genomic View for NPIPB7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NPIPB7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPIPB7 Gene

No data available for Regulatory Elements for NPIPB7 Gene

Proteins for NPIPB7 Gene

  • Protein details for NPIPB7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O75200-NPIB7_HUMAN
    Recommended name:
    Nuclear pore complex-interacting protein family member B7
    Protein Accession:
    O75200
    Secondary Accessions:
    • E7ERT9

    Protein attributes for NPIPB7 Gene

    Size:
    414 amino acids
    Molecular mass:
    47714 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAC27429.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for NPIPB7 Gene

Proteomics data for NPIPB7 Gene at MOPED

Post-translational modifications for NPIPB7 Gene

  • Modification sites at PhosphoSitePlus
  • Glycosylation at Asn111

Other Protein References for NPIPB7 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for NPIPB7 Gene

Domains for NPIPB7 Gene

Protein Domains for NPIPB7 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

NPIB7_HUMAN
Family:
  • Belongs to the NPIP family.:
    • O75200
genes like me logo Genes that share domains with NPIPB7: view

No data available for Gene Families for NPIPB7 Gene

Function for NPIPB7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NPIPB7 Gene

Localization for NPIPB7 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NPIPB7 Gene

Secreted.

Gene Ontology (GO) - Cellular Components for NPIPB7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with NPIPB7: view

Pathways for NPIPB7 Gene

SuperPathways for NPIPB7 Gene

No Data Available

Interacting Proteins for NPIPB7 Gene

Gene Ontology (GO) - Biological Process for NPIPB7 Gene

None

No data available for Pathways by source for NPIPB7 Gene

Transcripts for NPIPB7 Gene

mRNA/cDNA for NPIPB7 Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPIPB7 Gene

No ASD Table

Relevant External Links for NPIPB7 Gene

GeneLoc Exon Structure for
NPIPB7
ECgene alternative splicing isoforms for
NPIPB7

Expression for NPIPB7 Gene

mRNA expression in normal human tissues for NPIPB7 Gene

mRNA differential expression in normal tissues according to GTEx for NPIPB7 Gene

This gene is overexpressed in Testis (14.7).
genes like me logo Genes that share expressions with NPIPB7: view

Orthologs for NPIPB7 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for NPIPB7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 71 (a)
ManyToMany
-- 37
  • 90 (a)
ManyToMany
-- 37
  • 85 (a)
ManyToMany
-- 37
  • 88 (a)
ManyToMany
-- 37
  • 90 (a)
ManyToMany
Species with no ortholog for NPIPB7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for NPIPB7 Gene

ENSEMBL:
Gene Tree for NPIPB7 (if available)
TreeFam:
Gene Tree for NPIPB7 (if available)

Paralogs for NPIPB7 Gene

genes like me logo Genes that share paralogs with NPIPB7: view

Variants for NPIPB7 Gene

Relevant External Links for NPIPB7 Gene

HapMap Linkage Disequilibrium report
NPIPB7

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for NPIPB7 Gene

Disorders for NPIPB7 Gene

No disorders were found for NPIPB7 Gene.

No data available for UniProtKB/Swiss-Prot for NPIPB7 Gene

Publications for NPIPB7 Gene

  1. Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. (PMID: 10493829) Loftus B.J. … Adams M.D. (Genomics 1999) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for NPIPB7 Gene

Sources for NPIPB7 Gene

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