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Aliases for NPIPA8 Gene

Aliases for NPIPA8 Gene

  • Nuclear Pore Complex Interacting Protein Family, Member A8 2 3
  • Morpheus Gene Family Member 9 2 3
  • Nuclear Pore Complex-Interacting Protein Family Member A8 3
  • LCR16a9 3

External Ids for NPIPA8 Gene

Summaries for NPIPA8 Gene

GeneCards Summary for NPIPA8 Gene

NPIPA8 (Nuclear Pore Complex Interacting Protein Family, Member A8) is a Protein Coding gene. An important paralog of this gene is NPIPB11.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPIPA8 Gene

Genomics for NPIPA8 Gene

Genomic Location for NPIPA8 Gene

Start:
18,317,919 bp from pter
End:
18,336,736 bp from pter
Size:
18,818 bases
Orientation:
Minus strand

Genomic View for NPIPA8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NPIPA8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPIPA8 Gene

No data available for Regulatory Elements for NPIPA8 Gene

Proteins for NPIPA8 Gene

  • Protein details for NPIPA8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0DM63-NPIA8_HUMAN
    Recommended name:
    Nuclear pore complex-interacting protein family member A8
    Protein Accession:
    P0DM63
    Secondary Accessions:

    Protein attributes for NPIPA8 Gene

    Size:
    369 amino acids
    Molecular mass:
    42230 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NPIPA8 Gene

Proteomics data for NPIPA8 Gene at MOPED

Post-translational modifications for NPIPA8 Gene

No Post-translational modifications

Other Protein References for NPIPA8 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NPIPA8 Gene

Domains for NPIPA8 Gene

Protein Domains for NPIPA8 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

NPIA8_HUMAN
Family:
  • Belongs to the NPIP family.:
    • P0DM63
genes like me logo Genes that share domains with NPIPA8: view

No data available for Gene Families for NPIPA8 Gene

Function for NPIPA8 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NPIPA8 Gene

Localization for NPIPA8 Gene

No data available for Gene Ontology (GO) - Cellular Components for NPIPA8 Gene

Pathways for NPIPA8 Gene

SuperPathways for NPIPA8 Gene

No Data Available

Interacting Proteins for NPIPA8 Gene

Gene Ontology (GO) - Biological Process for NPIPA8 Gene

None

No data available for Pathways by source for NPIPA8 Gene

Transcripts for NPIPA8 Gene

mRNA/cDNA for NPIPA8 Gene

(5) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPIPA8 Gene

No ASD Table

Relevant External Links for NPIPA8 Gene

GeneLoc Exon Structure for
NPIPA8
ECgene alternative splicing isoforms for
NPIPA8

Expression for NPIPA8 Gene

mRNA expression in normal human tissues for NPIPA8 Gene

mRNA differential expression in normal tissues according to GTEx for NPIPA8 Gene

This gene is overexpressed in Brain - Cerebellum (5.3) and Brain - Cerebellar Hemisphere (4.1).
genes like me logo Genes that share expressions with NPIPA8: view

Orthologs for NPIPA8 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for NPIPA8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 84 (a)
OneToMany
Species with no ortholog for NPIPA8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for NPIPA8 Gene

ENSEMBL:
Gene Tree for NPIPA8 (if available)
TreeFam:
Gene Tree for NPIPA8 (if available)

Paralogs for NPIPA8 Gene

genes like me logo Genes that share paralogs with NPIPA8: view

Variants for NPIPA8 Gene

Sequence variations from dbSNP and Humsavar for NPIPA8 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs1807081 -- 18,328,468(+) AAGAA(A/T)GACAA intron-variant
rs28410342 -- 18,326,087(+) ATGGG(A/G)TTTCA intron-variant
rs28421289 -- 18,328,668(+) AATCT(C/T)GGCTC intron-variant
rs28425476 -- 18,329,681(+) TATAA(C/T)ATTGG intron-variant
rs28454449 -- 18,325,956(+) GTGGC(A/G)CTACC intron-variant

Relevant External Links for NPIPA8 Gene

HapMap Linkage Disequilibrium report
NPIPA8

No data available for Structural Variations from Database of Genomic Variants (DGV) for NPIPA8 Gene

Disorders for NPIPA8 Gene

No disorders were found for NPIPA8 Gene.

No data available for UniProtKB/Swiss-Prot for NPIPA8 Gene

Publications for NPIPA8 Gene

  1. Positive selection of a gene family during the emergence of humans and African apes. (PMID: 11586358) Johnson M.E. … Eichler E.E. (Nature 2001) 2 3
  2. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for NPIPA8 Gene

Sources for NPIPA8 Gene

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