Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NPIPA7 Gene

Aliases for NPIPA7 Gene

  • Nuclear Pore Complex Interacting Protein Family, Member A7 2 3

External Ids for NPIPA7 Gene

Summaries for NPIPA7 Gene

GeneCards Summary for NPIPA7 Gene

NPIPA7 (Nuclear Pore Complex Interacting Protein Family, Member A7) is a Protein Coding gene. An important paralog of this gene is NPIPB11.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPIPA7 Gene

Genomics for NPIPA7 Gene

Genomic Location for NPIPA7 Gene

Start:
16,379,055 bp from pter
End:
16,393,972 bp from pter
Size:
14,918 bases
Orientation:
Plus strand

Genomic View for NPIPA7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NPIPA7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPIPA7 Gene

No data available for Regulatory Elements for NPIPA7 Gene

Proteins for NPIPA7 Gene

  • Protein details for NPIPA7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    E9PJI5-NPIA7_HUMAN
    Recommended name:
    Nuclear pore complex-interacting protein family member A7
    Protein Accession:
    E9PJI5
    Secondary Accessions:

    Protein attributes for NPIPA7 Gene

    Size:
    369 amino acids
    Molecular mass:
    42230 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NPIPA7 Gene

Proteomics data for NPIPA7 Gene at MOPED

Post-translational modifications for NPIPA7 Gene

No Post-translational modifications

Other Protein References for NPIPA7 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NPIPA7 Gene

Domains for NPIPA7 Gene

Protein Domains for NPIPA7 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

NPIA7_HUMAN
Family:
  • Belongs to the NPIP family.:
    • E9PJI5
genes like me logo Genes that share domains with NPIPA7: view

No data available for Gene Families for NPIPA7 Gene

Function for NPIPA7 Gene

Gene Ontology (GO) - Molecular Function for NPIPA7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with NPIPA7: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NPIPA7 Gene

Localization for NPIPA7 Gene

No data available for Gene Ontology (GO) - Cellular Components for NPIPA7 Gene

Pathways for NPIPA7 Gene

SuperPathways for NPIPA7 Gene

No Data Available

Interacting Proteins for NPIPA7 Gene

Gene Ontology (GO) - Biological Process for NPIPA7 Gene

None

No data available for Pathways by source for NPIPA7 Gene

Transcripts for NPIPA7 Gene

mRNA/cDNA for NPIPA7 Gene

(10) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPIPA7 Gene

No ASD Table

Relevant External Links for NPIPA7 Gene

GeneLoc Exon Structure for
NPIPA7
ECgene alternative splicing isoforms for
NPIPA7

Expression for NPIPA7 Gene

mRNA expression in normal human tissues for NPIPA7 Gene

mRNA differential expression in normal tissues according to GTEx for NPIPA7 Gene

This gene is overexpressed in Brain - Cerebellum (4.9).
genes like me logo Genes that share expressions with NPIPA7: view

Orthologs for NPIPA7 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for NPIPA7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 84 (a)
OneToMany
Species with no ortholog for NPIPA7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for NPIPA7 Gene

ENSEMBL:
Gene Tree for NPIPA7 (if available)
TreeFam:
Gene Tree for NPIPA7 (if available)

Paralogs for NPIPA7 Gene

genes like me logo Genes that share paralogs with NPIPA7: view

Variants for NPIPA7 Gene

Sequence variations from dbSNP and Humsavar for NPIPA7 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs28495887 -- 16,388,588(+) TGCGG(G/T)GGCAT intron-variant
rs55743086 -- 16,383,194(+) TGAGG(C/G)AGGAG intron-variant
rs55836802 -- 16,383,008(+) AAAAA(-/A)TGGCC intron-variant
rs55848020 -- 16,383,299(+) AAAAA(A/C)AAAAA intron-variant
rs55957609 -- 16,382,886(+) GGCAG(A/G)AGAAT intron-variant

Relevant External Links for NPIPA7 Gene

HapMap Linkage Disequilibrium report
NPIPA7

No data available for Structural Variations from Database of Genomic Variants (DGV) for NPIPA7 Gene

Disorders for NPIPA7 Gene

No disorders were found for NPIPA7 Gene.

No data available for UniProtKB/Swiss-Prot for NPIPA7 Gene

Publications for NPIPA7 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  3. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for NPIPA7 Gene

Sources for NPIPA7 Gene

Back to Top

Content