Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NPIPA3 Gene

Aliases for NPIPA3 Gene

  • Nuclear Pore Complex Interacting Protein Family, Member A3 2 3

External Ids for NPIPA3 Gene

Summaries for NPIPA3 Gene

GeneCards Summary for NPIPA3 Gene

NPIPA3 (Nuclear Pore Complex Interacting Protein Family, Member A3) is a Protein Coding gene. An important paralog of this gene is NPIPB11.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPIPA3 Gene

Genomics for NPIPA3 Gene

Genomic Location for NPIPA3 Gene

Start:
14,708,944 bp from pter
End:
14,952,073 bp from pter
Size:
243,130 bases
Orientation:
Plus strand

Genomic View for NPIPA3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NPIPA3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPIPA3 Gene

No data available for Regulatory Elements for NPIPA3 Gene

Proteins for NPIPA3 Gene

  • Protein details for NPIPA3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    F8WFD2-NPIA3_HUMAN
    Recommended name:
    Nuclear pore complex-interacting protein family member A3
    Protein Accession:
    F8WFD2
    Secondary Accessions:

    Protein attributes for NPIPA3 Gene

    Size:
    350 amino acids
    Molecular mass:
    40061 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NPIPA3 Gene

Proteomics data for NPIPA3 Gene at MOPED

Post-translational modifications for NPIPA3 Gene

No Post-translational modifications

Other Protein References for NPIPA3 Gene

No data available for DME Specific Peptides for NPIPA3 Gene

Domains for NPIPA3 Gene

Protein Domains for NPIPA3 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

NPIA3_HUMAN
Family:
  • Belongs to the NPIP family.:
    • F8WFD2
genes like me logo Genes that share domains with NPIPA3: view

No data available for Gene Families for NPIPA3 Gene

Function for NPIPA3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NPIPA3 Gene

Localization for NPIPA3 Gene

No data available for Gene Ontology (GO) - Cellular Components for NPIPA3 Gene

Pathways for NPIPA3 Gene

SuperPathways for NPIPA3 Gene

No Data Available

Interacting Proteins for NPIPA3 Gene

Gene Ontology (GO) - Biological Process for NPIPA3 Gene

None

No data available for Pathways by source for NPIPA3 Gene

Transcripts for NPIPA3 Gene

mRNA/cDNA for NPIPA3 Gene

(29) REFSEQ mRNAs :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPIPA3 Gene

No ASD Table

Relevant External Links for NPIPA3 Gene

GeneLoc Exon Structure for
NPIPA3
ECgene alternative splicing isoforms for
NPIPA3

Expression for NPIPA3 Gene

mRNA expression in normal human tissues for NPIPA3 Gene

mRNA differential expression in normal tissues according to GTEx for NPIPA3 Gene

This gene is overexpressed in Brain - Cerebellum (6.1) and Brain - Cerebellar Hemisphere (5.0).
genes like me logo Genes that share expressions with NPIPA3: view

Orthologs for NPIPA3 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for NPIPA3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 84 (a)
OneToMany
Species with no ortholog for NPIPA3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for NPIPA3 Gene

ENSEMBL:
Gene Tree for NPIPA3 (if available)
TreeFam:
Gene Tree for NPIPA3 (if available)

Paralogs for NPIPA3 Gene

genes like me logo Genes that share paralogs with NPIPA3: view

Variants for NPIPA3 Gene

Relevant External Links for NPIPA3 Gene

HapMap Linkage Disequilibrium report
NPIPA3

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for NPIPA3 Gene

Disorders for NPIPA3 Gene

No disorders were found for NPIPA3 Gene.

No data available for UniProtKB/Swiss-Prot for NPIPA3 Gene

Publications for NPIPA3 Gene

  1. Novel retinal and cone photoreceptor transcripts revealed by human macular expression profiling. (PMID: 18055785) Hornan D.M. … Webster A.R. (Invest. Ophthalmol. Vis. Sci. 2007) 3
  2. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for NPIPA3 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate NPIPA3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for NPIPA3
    • Block miRNA regulation of NPIPA3 using miScript Target Protectors

    Sources for NPIPA3 Gene

    Back to Top

    Content