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Aliases for NPCDR1 Gene

Subcategory (RNA class) for NPCDR1 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for NPCDR1 Gene

  • Nasopharyngeal Carcinoma, Down-Regulated 1 2 3
  • NPCDRG 3 4
  • NPCR 3 4
  • Nasopharyngeal Carcinoma-Related Gene Protein 4
  • Nasopharyngeal Carcinoma-Related Protein 3

External Ids for NPCDR1 Gene

Previous GeneCards Identifiers for NPCDR1 Gene

  • GC03M059914
  • GC02U900761

Summaries for NPCDR1 Gene

GeneCards Summary for NPCDR1 Gene

NPCDR1 (Nasopharyngeal Carcinoma, Down-Regulated 1) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with NPCDR1 include Acute Apical Periodontitis and Nasopharyngeal Carcinoma.

Additional gene information for NPCDR1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPCDR1 Gene

Genomics for NPCDR1 Gene

Genomic Location for NPCDR1 Gene

Chromosome:
3
Orientation:
Unknown strand

Genomic View for NPCDR1 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

No data available for Regulatory Elements and RefSeq DNA sequence for NPCDR1 Gene

Proteins for NPCDR1 Gene

  • Protein details for NPCDR1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BY65-NPCR1_HUMAN
    Recommended name:
    Nasopharyngeal carcinoma down-regulated gene protein 1
    Protein Accession:
    Q9BY65
    Secondary Accessions:
    • Q8NG33

    Protein attributes for NPCDR1 Gene

    Size:
    106 amino acids
    Molecular mass:
    11990 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAK19052.1; Type=Frameshift; Positions=102; Evidence={ECO:0000305}; Sequence=AAM61757.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=AAM61757.1; Type=Frameshift; Positions=102; Evidence={ECO:0000305};

neXtProt entry for NPCDR1 Gene

Post-translational modifications for NPCDR1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPCDR1 Gene

Domains & Families for NPCDR1 Gene

Protein Domains for NPCDR1 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for NPCDR1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NPCDR1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for NPCDR1 Gene

Function for NPCDR1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for NPCDR1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPCDR1 Gene

Localization for NPCDR1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for NPCDR1 gene
Compartment Confidence
cytosol 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPCDR1 Gene

Pathways & Interactions for NPCDR1 Gene

SuperPathways for NPCDR1 Gene

No Data Available

Interacting Proteins for NPCDR1 Gene

Gene Ontology (GO) - Biological Process for NPCDR1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPCDR1 Gene

Drugs & Compounds for NPCDR1 Gene

No Compound Related Data Available

Transcripts for NPCDR1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for NPCDR1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for NPCDR1 Gene

No ASD Table

Relevant External Links for NPCDR1 Gene

ECgene alternative splicing isoforms for
NPCDR1

No data available for mRNA/cDNA for NPCDR1 Gene

Expression for NPCDR1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPCDR1 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPCDR1 Gene:

NPCDR1

SOURCE GeneReport for Unigene cluster for NPCDR1 Gene:

Hs.683659

Evidence on tissue expression from TISSUES for NPCDR1 Gene

  • Blood(2)
genes like me logo Genes that share expression patterns with NPCDR1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPCDR1 Gene

Orthologs for NPCDR1 Gene

No data available for Orthologs and Evolution for NPCDR1 Gene

Paralogs for NPCDR1 Gene

No data available for Paralogs for NPCDR1 Gene

Variants for NPCDR1 Gene

Variation tolerance for NPCDR1 Gene

Gene Damage Index Score: 19.18; 98.79% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for NPCDR1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPCDR1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for NPCDR1 Gene

Disorders for NPCDR1 Gene

MalaCards: The human disease database

(6) MalaCards diseases for NPCDR1 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
acute apical periodontitis
  • acute apical periodontitis of pulpal origin
nasopharyngeal carcinoma
  • nasopharynx carcinoma
plasmodium ovale malaria
  • malariaby plasmodium ovale
kyasanur forest disease
  • kfd
mixed malaria
  • malaria by more than one parasite
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for NPCDR1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NPCDR1
genes like me logo Genes that share disorders with NPCDR1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for NPCDR1 Gene

Publications for NPCDR1 Gene

  1. Genetic variants associated with breast size also influence breast cancer risk. (PMID: 22747683) Eriksson N … Tung JY (BMC medical genetics 2012) 3 60

Products for NPCDR1 Gene

Sources for NPCDR1 Gene

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