Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NPAP1P2 Gene

Subcategory (RNA class) for NPAP1P2 Gene

lncRNA

Aliases for NPAP1P2 Gene

  • Nuclear Pore Associated Protein 1 Pseudogene 2 2 3 5

External Ids for NPAP1P2 Gene

ORGUL Members for NPAP1P2 Gene

Previous GeneCards Identifiers for NPAP1P2 Gene

  • GC10P081622
  • GC10P081727
  • GC10P080041
  • GC10P080068
  • GC10P080092
  • GC10P080115

Summaries for NPAP1P2 Gene

GeneCards Summary for NPAP1P2 Gene

NPAP1P2 (Nuclear Pore Associated Protein 1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPAP1P2 Gene

Genomics for NPAP1P2 Gene

Regulatory Elements for NPAP1P2 Gene

Enhancers for NPAP1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F079125 1.8 FANTOM5 Ensembl ENCODE 16.2 -714.6 -714578 41.5 HDGF PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 PPIF ZMIZ1-AS1 LOC642361 PGGT1BP2 NPAP1P2 ENSG00000272489 ZMIZ1 GC10M079169
GH10F079066 1.5 FANTOM5 ENCODE 16.2 -784.1 -784119 20.2 MLX FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 MEF2D ZNF610 ZNF585B LOC642361 ZMIZ1-AS1 NPAP1P2 PGGT1BP2 ZMIZ1 GC10M079169
GH10F079110 1.3 Ensembl ENCODE 16.2 -746.3 -746270 6.6 ATF1 PKNOX1 ARNT SIN3A ARID4B GLI4 FOS ZNF263 MCM3 ZNF488 NPAP1P2 PGGT1BP2 ZMIZ1 GC10M079169
GH10F079442 1.1 ENCODE 16.2 -415.8 -415830 5.0 HDGF PKNOX1 ARNT CREB3L1 SIN3A YBX1 FEZF1 ZNF2 YY1 FOS ENSG00000272489 NPAP1P2 PGGT1BP2 ZNF519P1 ENSG00000235858 ZCCHC24 LOC105378382
GH10F079346 1.1 ENCODE 16.2 -511.7 -511694 4.5 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 ZNF143 KLF13 NPAP1P2 PGGT1BP2 ZNF519P1 ENSG00000235858 ENSG00000272489 LOC642361 PPIF ZCCHC24 ENSG00000235426
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NPAP1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for NPAP1P2 Gene

Chromosome:
10
Start:
79,860,573 bp from pter
End:
79,862,137 bp from pter
Size:
1,565 bases
Orientation:
Plus strand

Genomic View for NPAP1P2 Gene

Genes around NPAP1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPAP1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPAP1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPAP1P2 Gene

Proteins for NPAP1P2 Gene

Post-translational modifications for NPAP1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPAP1P2 Gene

Domains & Families for NPAP1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPAP1P2 Gene

Function for NPAP1P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPAP1P2 Gene

Localization for NPAP1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NPAP1P2 Gene

Pathways & Interactions for NPAP1P2 Gene

SuperPathways for NPAP1P2 Gene

No Data Available

Interacting Proteins for NPAP1P2 Gene

Gene Ontology (GO) - Biological Process for NPAP1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPAP1P2 Gene

Transcripts for NPAP1P2 Gene

mRNA/cDNA for NPAP1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPAP1P2 Gene

No ASD Table

Relevant External Links for NPAP1P2 Gene

GeneLoc Exon Structure for
NPAP1P2
ECgene alternative splicing isoforms for
NPAP1P2

Expression for NPAP1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NPAP1P2 Gene

mRNA differential expression in normal tissues according to GTEx for NPAP1P2 Gene

This gene is overexpressed in Testis (x46.8).

NURSA nuclear receptor signaling pathways regulating expression of NPAP1P2 Gene:

NPAP1P2
genes like me logo Genes that share expression patterns with NPAP1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NPAP1P2 Gene

Orthologs for NPAP1P2 Gene

Evolution for NPAP1P2 Gene

ENSEMBL:
Gene Tree for NPAP1P2 (if available)
TreeFam:
Gene Tree for NPAP1P2 (if available)

No data available for Orthologs for NPAP1P2 Gene

Paralogs for NPAP1P2 Gene

No data available for Paralogs for NPAP1P2 Gene

Variants for NPAP1P2 Gene

Relevant External Links for NPAP1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPAP1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPAP1P2 Gene

Disorders for NPAP1P2 Gene

No disorders were found for NPAP1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPAP1P2 Gene

Publications for NPAP1P2 Gene

No publications were found for NPAP1P2 Gene.

Products for NPAP1P2 Gene

Sources for NPAP1P2 Gene

Content
Loading form....