NOX5 Gene
protein-coding GIFtS: 48
GCID: GC15P069222
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|
NADPH oxidase, EF-hand calcium binding domain 5
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Aliases
for NOX5 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| NADPH Oxidase, EF-Hand Calcium Binding Domain 51 2 | | NOX5A1 5 | | NOX5B1 5 | | NADPH Oxidase 52 | | EC 1.6.3.-3 |
Export aliases for NOX5 gene to outside databasesPrevious GC identifers: GC15P065065 GC15P062322 GC15P066801 GC15P066939 GC15P066940 GC15P067009 GC15P046055 |
Summaries
for NOX5 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for NOX5:
This gene is predominantly expressed in the testis and lymphocyte-rich areas of spleen and lymph nodes. It encodes acalcium-dependen NADPH oxidase that generates superoxide, and functions as a calcium-dependent proton channel that mayregulate redox-dependent processes in lymphocytes and spermatozoa. Alternatively spliced transcript variants encodingdifferent isoforms have been described for this gene. (provided by RefSeq, Oct 2011)
UniProtKB/Swiss-Prot: NOX5_HUMAN, Q96PH1Function: Calcium-dependent NADPH oxidase that generates superoxide. Also functions as a calcium-dependent protonchannel and may regulate redox-dependent processes in lymphocytes and spermatozoa. May play a role in cell growth andapoptosis. Isoform v2 and isoform v5 are involved in endothelial generation of reactive oxygen species (ROS),proliferation and angiogenesis and contribute to endothelial response to thrombin
Gene Wiki entry for NOX5
|
Genomic Views
for NOX5 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000015.9 NC_018926.1 NT_010194.17
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the NOX5 gene promoter:
RFX1 MIF-1 HNF-4alpha2 Evi-1 HNF-4alpha1 POU2F1 POU2F1b POU2F1a HOXA5 POU2F1c
Other transcription factors
Search SABiosciences Chromatin IP Primers for NOX5
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NOX5 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 15q23 Ensembl cytogenetic band: 15q23 HGNC cytogenetic band: 15q22.31NOX5 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 15 GeneLoc Exon Structure GeneLoc location for GC15P069222: view genomic region
(about GC identifiers)
Start:
|
69,222,839 bp from pter |
End:
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69,355,083 bp from pter |
Size:
|
132,245 bases |
Orientation:
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plus strand |
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Proteins
for NOX5 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: NOX5_HUMAN, Q96PH1 (See
protein sequence)Recommended Name: NADPH oxidase 5 Size: 765 amino acids; 86439 Da
Cofactor: FAD
Cofactor: Magnesium
Subcellular location: Membrane; Multi-pass membrane protein (Potential)
Subcellular location: Isoform v2: Endoplasmic reticulum
Subcellular location: Isoform v5: Endoplasmic reticulum
Developmental stage: Expressed in fetal tissues
Sequence caution: Sequence=AAG33638.1; Type=Erroneous initiation; Note=Translation N-terminally extended;Sequence=BAB15319.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=BAB84897.1;Type=Erroneous initiation; Note=Translation N-terminally shortened;
Secondary accessions: B2RBJ4 Q08AN2 Q08AN3 Q8TEQ1 Q8TER4 Q96PH2 Q96PJ8 Q96PJ9 Q9H6E0 Q9HAM8Alternative splicing: 6 isoforms: Q96PH1-1 Q96PH1-3 Q96PH1-4 Q96PH1-2 Q96PH1-5 Q96PH1-6 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for NOX5: NX_Q96PH1
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q96PH1
NOX5 Protein expression data from MOPED and PaxDb: --
REFSEQ proteins (3 alternative transcripts):
NP_001171708.1 NP_001171709.1 NP_078781.3
ENSEMBL proteins: ENSP00000410887 ENSP00000454143 ENSP00000416828 ENSP00000373518 ENSP00000432440 ENSP00000455703
Human Recombinant Protein Products:
Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005783 | endoplasmic reticulum |
IEA | -- | | GO:0016021 | integral to membrane |
IEA | -- |
NOX5 for ontologies About GeneDecksing
NOX5 Antibody Products:
Assay Products for NOX5: |
Protein
Domains /
Families
for NOX5 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
NOX5 for domains About GeneDecksing
5/8 InterPro domains/families (see all 8):Graphical View of Domain Structure for InterPro Entry Q96PH1ProtoNet protein and cluster: Q96PH1 1 Blocks protein family: IPB013130 Ferric reductase-like transmembrane component
UniProtKB/Swiss-Prot: NOX5_HUMAN, Q96PH1Domain: Isoform v1 and isoform v2 of this protein have four functional EF-hand calcium-binding domains. Isoform v3 andisoform v4 have the third EF-hand domain interrupted by an insertSimilarity: Contains 4 EF-hand domainsSimilarity: Contains 1 FAD-binding FR-type domainSimilarity: Contains 1 ferric oxidoreductase domain |
Function
for NOX5 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: NOX5_HUMAN, Q96PH1Function: Calcium-dependent NADPH oxidase that generates superoxide. Also functions as a calcium-dependent protonchannel and may regulate redox-dependent processes in lymphocytes and spermatozoa. May play a role in cell growth andapoptosis. Isoform v2 and isoform v5 are involved in endothelial generation of reactive oxygen species (ROS),proliferation and angiogenesis and contribute to endothelial response to thrombinEnzyme regulation: Activated by calcium which induces conformational changes and interaction between the N-terminalregulatory region and the C-terminal catalytic region. Inhibited by diphenylene iodoniumBiophysicochemical properties: Kinetic parameters: KM=1.06 uM for calcium;Induction: Down-regulated by TGFB1Enzyme Number (IUBMB): EC 1.6.3.-1
Clone
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OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NOX5 (see all 4)
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
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In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NOX5 |
Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6): About this table
NOX5 for ontologies About GeneDecksing
2 GenomeRNAi human phenotypes for NOX5:
|
Pathways & Interactions
for NOX5 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Apoptotic Pathways in Synovial Fibroblasts | | | 2 | PAK Pathway | |
2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for NOX5
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for NOX5
1 Interacting protein for NOX5 (Q96PH12) via UniProtKB, MINT, STRING, and/or I2DAbout this table
Gene Ontology (GO): 5/13 biological process terms (GO ID links to tree view) (see all 13): About this table
NOX5 for ontologies About GeneDecksing
|
Drugs & Compounds
for NOX5 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
NOX5 for compounds About GeneDecksing
 Browse Tocris compounds for NOX5
5 HMDB Compounds for NOX5 About this table
2 Novoseek chemical compound relationships for NOX5 gene About this table
Search CenterWatch for drugs/clinical trials and news about NOX5
|
Transcripts
for NOX5 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for NOX5 gene (3 alternative transcripts): NM_001184779.1 NM_001184780.1 NM_024505.3 Unigene Cluster for NOX5: NADPH oxidase, EF-hand calcium binding domain 5 Hs.657932 [show with all ESTs]Unigene Representative Sequence: NR_0336719 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000448182 ENST00000260364(uc002arq.2 uc002arp.2 uc010bid.2)
ENST00000455873 ENST00000388866(uc002arr.2 uc002ars.2 uc010bif.2)
ENST00000530406 ENST00000527315(uc010bie.2) ENST00000525143 ENST00000525163
ENST00000529367
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NOX5 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NOX5 (see all 4)
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector (see all 3): NOX5 (NM_024505) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NOX5 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NOX5 |
Additional cDNA sequence: AF275321.1 AF317889.1 AF325189.1 AF325190.1 AF353088.1 AF353089.1 AK026011.1 AK074058.1 AK314689.1 AY166601.1 AY358983.1 BC017998.1 BC125097.1 BC125098.1 DQ413001.1 NR_033671.2 NR_033672.1 10 DOTS entries: DT.452299 DT.99947465 DT.97838444 DT.97838445 DT.100682814 DT.97838442 DT.65288255 DT.100759159 DT.121049990 DT.75185674 24/94 AceView cDNA sequences (see all 94): BI826643 AF325189 BQ013471 AI652853 BQ215955 BU625703 BE045942 CD107927 NM_145658 BF434176 BM929516 BC017998 AI990773 AW340601 AI797949 AY166601 H52859 BM564110 AY358983 AF353088 AF353089 NM_024505 AF325190 CR610432
GeneLoc Exon Structure
|
Expression
for NOX5 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| NOX5 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --
About this image
Genevestigator expression for NOX5
SOURCE GeneReport for Unigene cluster: Hs.657932
UniProtKB/Swiss-Prot: NOX5_HUMAN, Q96PH1Tissue specificity: Mainly expressed in pachytene spermatocytes of testis and in lymphocyte-rich areas of spleen andlymph nodes. Isoform v1 is expressed in spleen. Isoform v2 is expressed in testis. Also detected in ovary, placenta,pancreas, cardiac fibroblasts. Expressed in B-cells and prostate malignant cells. Isoform v1 and isoform v3 areexpressed in epithelial colorectal adenocarcinoma cells. Isoform v2 and isoform v4 are expressed in endothelial cells.Isoform v1, isoform v2, isoform v3 and isoform v4 are expressed in pulmonary artery smooth muscle cells. Isoform v2and isoform v5 are expressed in microvascular endothelial cells (at protein level)
SABiosciences Expression via Pathway-Focused PCR Arrays including NOX5: | Oxidative Stress in human mouse rat | | Nitric Oxide Signaling Pathway in human mouse rat | | Apoptosis 384HT in human mouse rat | | Inflammatory Response & Autoimmunity 384HT in human mouse rat |
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NOX5
Browse OriGene validated miRNA SYBR primer pairs
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Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NOX5 |
Orthologs
for NOX5 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of eukaryotes.
Orthologs for NOX5 gene from 6/20 species (see all 20) About this table
Species with no ortholog for NOX5
ENSEMBL Gene Tree for NOX5 (if available)
TreeFam Gene Tree for NOX5 (if available) |
Paralogs
for NOX5 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for NOX5 gene
- NOX12 CYBB2 NOX32 NOX42 DUOX22 DUOX12
NOX5 for paralogs About GeneDecksing
|
Genomic Variants
for NOX5 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 15 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for NOX5 (69222839 - 69355083 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 3 variations for NOX5
1 CNV: 7070
2 Indels: 49582 11099 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing NOX5 |
|
Disorders
/ Diseases
for NOX5 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
NOX5 for disorders About GeneDecksing
OMIM gene information: 606572
OMIM disorders: --
14  diseases for NOX5: About MalaCardsgastroesophageal reflux disease barrett's esophagus hairy cell leukemia chronic granulomatous disease
myocardial infarction t-cell leukemia leukemia prostate cancer
esophagitis cholesterol prostatitis immunodeficiency
adenocarcinoma neuronitis
Human Genome Epidemiology (HuGE) Navigator: NOX5 (2 documents)
Export disorders for NOX5 gene to outside databases
|
Publications
for NOX5 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for NOX5 gene, integrated from 9 sources (see all 52):
(articles sorted by number of sources associating them with NOX5) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- A Ca(2+)-activated NADPH oxidase in testis, spleen, and lymph nodes. (PubMed id 11483596)1, 2, 3, 9 Banfi B....Krause K.-H. (2001)
- Mechanism of Ca2+ activation of the NADPH oxidase 5 (NOX5). (PubMed id 14982937)1, 2, 9 Banfi B.... Cox J.A. (2004)
- NOX5 variants are functionally active in endothelial cells. (PubMed id 17275676)1, 2 BelAiba R.S.... Gorlach A. (2007)
- Expression and activity of NOX5 in the circulating malignant B cells of hairy cell leukemia. (PubMed id 16339585)1, 2 Kamiguti A.S.... Zuzel M. (2005)
- NAD(P)H oxidase 4 mediates transforming growth factor-beta1-induced differentiation of cardiac fibroblasts into myofibroblasts. (PubMed id 16179589)1, 2 Cucoranu I.... Sorescu D. (2005)
- Point mutations in the proline-rich region of p22phox are dominant inhibitors of Nox1- and Nox2-dependent reactive oxygen generation. (PubMed id 15994299)1, 2 Kawahara T.... Lambeth J.D. (2005)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- Homologs of gp91phox: cloning and tissue expression of Nox3, Nox4, and Nox5. (PubMed id 11376945)1, 2 Cheng G.... Lambeth J.D. (2001)
- NADPH oxidase 5 (NOX5) interacts with and is regulated by calmodulin. (PubMed id 17346712)1, 9 Tirone F. and Cox J.A. (2007)
- NOX5: from basic biology to signaling and disease. (PubMed id 22182486)1 Bedard K....Krause K.H. (2012)
|
External Searches for NOX5 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing NOX5 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing NOX5 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing NOX5 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for NOX5 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for NOX5 gene:
Search GeneIP for patents involving NOX5
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for NOX5 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
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| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NOX5 |
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