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Aliases for NOP56P3 Gene

Subcategory (RNA class) for NOP56P3 Gene

lncRNA

Aliases for NOP56P3 Gene

  • NOP56 Ribonucleoprotein Pseudogene 3 2 3 5

External Ids for NOP56P3 Gene

ORGUL Members for NOP56P3 Gene

Previous GeneCards Identifiers for NOP56P3 Gene

  • GC00U935866

Summaries for NOP56P3 Gene

GeneCards Summary for NOP56P3 Gene

NOP56P3 (NOP56 Ribonucleoprotein Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NOP56P3 Gene

Genomics for NOP56P3 Gene

Regulatory Elements for NOP56P3 Gene

Enhancers for NOP56P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G079557 1.2 Ensembl ENCODE 0.7 +0.4 358 3.9 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 PPARG KAT8 RCOR2 HNF4A PAWR ENSG00000258044 ENSG00000257894 NOP56P3 LOC105369864
GH12G079545 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.4 -10382 5.8 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF143 FOS SP5 PAWR ENSG00000258044 ENSG00000257894 ENSG00000257474 NOP56P3
GH12G079554 1 Ensembl ENCODE 0.7 -3.3 -3324 1.6 CTCF ZNF654 ZHX2 RAD21 YY1 MCM7 GATA3 RAD51 ZNF366 ZNF512 PAWR ENSG00000258044 NOP56P3 ENSG00000257474
GH12G079565 1.1 Ensembl ENCODE 0.4 +8.0 8041 1.9 ELF3 FOXA2 MLX RAD21 RARA YY1 SLC30A9 GATA4 CREM MIXL1 PAWR ENSG00000258044 NOP56P3 LOC105369864
GH12G079684 1.6 FANTOM5 ENCODE dbSUPER 0.1 +130.4 130384 9.2 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZBTB7B YY1 FOS DEK ENSG00000258044 ENSG00000257894 LOC105369864 NOP56P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NOP56P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for NOP56P3 Gene

Chromosome:
12
Start:
79,558,782 bp from pter
End:
79,559,166 bp from pter
Size:
385 bases
Orientation:
Plus strand

Genomic View for NOP56P3 Gene

Genes around NOP56P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NOP56P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NOP56P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOP56P3 Gene

Proteins for NOP56P3 Gene

Post-translational modifications for NOP56P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NOP56P3 Gene

Domains & Families for NOP56P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NOP56P3 Gene

Function for NOP56P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NOP56P3 Gene

Localization for NOP56P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NOP56P3 Gene

Pathways & Interactions for NOP56P3 Gene

SuperPathways for NOP56P3 Gene

No Data Available

Interacting Proteins for NOP56P3 Gene

Gene Ontology (GO) - Biological Process for NOP56P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NOP56P3 Gene

Drugs & Compounds for NOP56P3 Gene

No Compound Related Data Available

Transcripts for NOP56P3 Gene

mRNA/cDNA for NOP56P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NOP56P3 Gene

No ASD Table

Relevant External Links for NOP56P3 Gene

GeneLoc Exon Structure for
NOP56P3
ECgene alternative splicing isoforms for
NOP56P3

Expression for NOP56P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NOP56P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of NOP56P3 Gene:

NOP56P3
genes like me logo Genes that share expression patterns with NOP56P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NOP56P3 Gene

Orthologs for NOP56P3 Gene

Evolution for NOP56P3 Gene

ENSEMBL:
Gene Tree for NOP56P3 (if available)
TreeFam:
Gene Tree for NOP56P3 (if available)

No data available for Orthologs for NOP56P3 Gene

Paralogs for NOP56P3 Gene

No data available for Paralogs for NOP56P3 Gene

Variants for NOP56P3 Gene

Relevant External Links for NOP56P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NOP56P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NOP56P3 Gene

Disorders for NOP56P3 Gene

No disorders were found for NOP56P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NOP56P3 Gene

Publications for NOP56P3 Gene

No publications were found for NOP56P3 Gene.

Products for NOP56P3 Gene

Sources for NOP56P3 Gene

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