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Aliases for NOP56P3 Gene

Subcategory (RNA class) for NOP56P3 Gene

lncRNA

Aliases for NOP56P3 Gene

  • NOP56 Ribonucleoprotein Pseudogene 3 2 3 5

External Ids for NOP56P3 Gene

ORGUL Members for NOP56P3 Gene

Previous GeneCards Identifiers for NOP56P3 Gene

  • GC00U935866

Summaries for NOP56P3 Gene

GeneCards Summary for NOP56P3 Gene

NOP56P3 (NOP56 Ribonucleoprotein Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for NOP56P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NOP56P3 Gene

Genomics for NOP56P3 Gene

GeneHancer (GH) Regulatory Elements for NOP56P3 Gene

Promoters and enhancers for NOP56P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I079557 Enhancer 1.1 Ensembl ENCODE 550.8 +0.4 357 3.9 ELF3 FOXA2 MLX ARID4B DMAP1 RAD21 RARA ETS1 YY1 CREM NOP56P3 PAWR ENSG00000258044 ENSG00000257894 LOC105369864
GH12I079554 Enhancer 0.8 Ensembl ENCODE 0.8 -3.3 -3323 1.6 CTCF ZNF654 RXRA RAD21 ZNF592 YY1 SP1 GATA3 SMC3 ZNF143 PAWR ENSG00000258044 NOP56P3 ENSG00000257474
GH12I079545 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.4 -10381 5.8 CLOCK FOXA2 SMAD1 MLX ARID4B NEUROD1 SIN3A DMAP1 ZNF2 ETS1 PAWR ENSG00000258044 ENSG00000257894 ENSG00000257474 NOP56P3
GH12I079565 Enhancer 1 Ensembl ENCODE 0.4 +8.0 8041 1.9 ELF3 FOXA2 MLX RAD21 RARA YY1 SLC30A9 CREM MIXL1 MXD4 PAWR ENSG00000258044 NOP56P3 LOC105369864
GH12I079684 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.1 +130.4 130383 9.2 HDGF PKNOX1 CLOCK FOXA2 ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF213 LOC105369864 PAWR ENSG00000258044 ENSG00000257894 NOP56P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NOP56P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NOP56P3 Gene

Genomic Locations for NOP56P3 Gene
chr12:79,558,782-79,559,166
(GRCh38/hg38)
Size:
385 bases
Orientation:
Plus strand

Genomic View for NOP56P3 Gene

Genes around NOP56P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NOP56P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NOP56P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOP56P3 Gene

Proteins for NOP56P3 Gene

Post-translational modifications for NOP56P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NOP56P3 Gene

Domains & Families for NOP56P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NOP56P3 Gene

Function for NOP56P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NOP56P3 Gene

Localization for NOP56P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NOP56P3 Gene

Pathways & Interactions for NOP56P3 Gene

SuperPathways for NOP56P3 Gene

No Data Available

Interacting Proteins for NOP56P3 Gene

Gene Ontology (GO) - Biological Process for NOP56P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NOP56P3 Gene

Drugs & Compounds for NOP56P3 Gene

No Compound Related Data Available

Transcripts for NOP56P3 Gene

mRNA/cDNA for NOP56P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NOP56P3 Gene

No ASD Table

Relevant External Links for NOP56P3 Gene

GeneLoc Exon Structure for
NOP56P3
ECgene alternative splicing isoforms for
NOP56P3

Expression for NOP56P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NOP56P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of NOP56P3 Gene:

NOP56P3
genes like me logo Genes that share expression patterns with NOP56P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NOP56P3 Gene

Orthologs for NOP56P3 Gene

Evolution for NOP56P3 Gene

ENSEMBL:
Gene Tree for NOP56P3 (if available)
TreeFam:
Gene Tree for NOP56P3 (if available)

No data available for Orthologs for NOP56P3 Gene

Paralogs for NOP56P3 Gene

No data available for Paralogs for NOP56P3 Gene

Variants for NOP56P3 Gene

Additional Variant Information for NOP56P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NOP56P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NOP56P3 Gene

Disorders for NOP56P3 Gene

No disorders were found for NOP56P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NOP56P3 Gene

Publications for NOP56P3 Gene

No publications were found for NOP56P3 Gene.

Products for NOP56P3 Gene

Sources for NOP56P3 Gene

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