Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NOP14-AS1 Gene

Subcategory (RNA class) for NOP14-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NOP14-AS1 Gene

  • NOP14 Antisense RNA 1 2 3 5
  • NOP14 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 4 Open Reading Frame 10 2
  • RES4-24 3
  • C4orf10 3

External Ids for NOP14-AS1 Gene

Previous HGNC Symbols for NOP14-AS1 Gene

  • C4orf10

Summaries for NOP14-AS1 Gene

GeneCards Summary for NOP14-AS1 Gene

NOP14-AS1 (NOP14 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NOP14-AS1 Gene

Genomics for NOP14-AS1 Gene

Regulatory Elements for NOP14-AS1 Gene

Enhancers for NOP14-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F002865 1.2 Ensembl ENCODE 25.5 -66.9 -66907 4.0 ATF1 ARNT ARID4B ZNF766 ELK1 GATA2 ZNF263 SP5 NCOA1 MEF2D GRK4 NOP14-AS1 ADD1 TNIP2 MFSD10 NOP14 GC04P002843 GC04P002844 GC04P002845 PIR46708
GH04F002415 1.1 ENCODE 15.6 -516.9 -516900 4.2 PKNOX1 CREB3L1 ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF207 ZNF143 SP3 ZFYVE28 NOP14-AS1 MIR943 SH3BP2 RNF4 MXD4 GC04M002409
GH04F002871 0.7 Ensembl 23 -62.4 -62399 2.6 SOX5 SOX13 PKNOX1 TEAD1 HLF CEBPB CEBPG TEAD3 RARA SMARCA4 GRK4 NOP14-AS1 MFSD10 TNIP2 GC04P002844 GC04P002845 GC04P002843 GC04P002904 PIR46708
GH04F003368 1.1 FANTOM5 ENCODE 14.5 +435.3 435338 2.7 RING1 KLF1 PKNOX1 JUN MAX FEZF1 BMI1 ZIC2 ZNF366 EED NOP14-AS1 RGS12 PIR55428 PIR36896
GH04F002467 1.1 ENCODE 14.5 -465.0 -464978 4.6 PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 FOS NOP14-AS1 HAUS3 MIR943 TMEM129 RNF4 ZFYVE28 SH3BP2 GC04M002457 GC04P002484
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NOP14-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for NOP14-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001235018 -199 2201 HDGF ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 FOS PAF1 SP3

Genomic Location for NOP14-AS1 Gene

2,934,899 bp from pter
2,961,738 bp from pter
26,840 bases
Plus strand

Genomic View for NOP14-AS1 Gene

Genes around NOP14-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NOP14-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NOP14-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOP14-AS1 Gene

Proteins for NOP14-AS1 Gene

Post-translational modifications for NOP14-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NOP14-AS1 Gene

Domains & Families for NOP14-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NOP14-AS1 Gene

Function for NOP14-AS1 Gene

Phenotypes for NOP14-AS1 Gene

genes like me logo Genes that share phenotypes with NOP14-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NOP14-AS1 Gene

Localization for NOP14-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NOP14-AS1 Gene

Pathways & Interactions for NOP14-AS1 Gene

SuperPathways for NOP14-AS1 Gene

No Data Available

Interacting Proteins for NOP14-AS1 Gene

Gene Ontology (GO) - Biological Process for NOP14-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NOP14-AS1 Gene

Transcripts for NOP14-AS1 Gene

mRNA/cDNA for NOP14-AS1 Gene

(8) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NOP14-AS1 Gene

NOP14 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NOP14-AS1 Gene

No ASD Table

Relevant External Links for NOP14-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NOP14-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NOP14-AS1 Gene

SOURCE GeneReport for Unigene cluster for NOP14-AS1 Gene:

genes like me logo Genes that share expression patterns with NOP14-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NOP14-AS1 Gene

Orthologs for NOP14-AS1 Gene

Evolution for NOP14-AS1 Gene

Gene Tree for NOP14-AS1 (if available)
Gene Tree for NOP14-AS1 (if available)

No data available for Orthologs for NOP14-AS1 Gene

Paralogs for NOP14-AS1 Gene

No data available for Paralogs for NOP14-AS1 Gene

Variants for NOP14-AS1 Gene

Sequence variations from dbSNP and Humsavar for NOP14-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10000927 -- 2,938,702(+) ggggt(C/T)ttcct intron-variant, nc-transcript-variant, utr-variant-3-prime
rs10002702 -- 2,938,335(+) GACCA(A/G/T)CATGG intron-variant, nc-transcript-variant, utr-variant-3-prime
rs10030687 -- 2,936,960(+) CCAGC(A/G)CTGTC nc-transcript-variant
rs1054090 -- 2,941,634(-) TCTCC(A/G)AGCCC intron-variant, nc-transcript-variant, reference, missense
rs10576953 -- 2,950,877(+) GAGAC(-/AGAG)AGAGA intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for NOP14-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv593438 CNV gain 21841781
nsv593437 CNV gain 21841781
nsv474400 CNV novel sequence insertion 20440878
nsv461163 CNV gain 19166990
esv3599414 CNV gain 21293372
esv3599412 CNV gain 21293372
esv2726867 CNV deletion 23290073
esv2726866 CNV deletion 23290073
esv2726865 CNV deletion 23290073
esv2726835 CNV deletion 23290073
esv1551216 CNV deletion 17803354

Relevant External Links for NOP14-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NOP14-AS1 Gene

Disorders for NOP14-AS1 Gene

Relevant External Links for NOP14-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for NOP14-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NOP14-AS1 Gene

Publications for NOP14-AS1 Gene

  1. The primary structure and genomic organization of five novel transcripts located close to the Huntington's disease gene on human chromosome 4p16.3. (PMID: 9734812) Hadano S. … Ikeda J.-E. (DNA Res. 1998) 2 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for NOP14-AS1 Gene

Sources for NOP14-AS1 Gene

Loading form....