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Aliases for NOP14-AS1 Gene

Subcategory (RNA class) for NOP14-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NOP14-AS1 Gene

  • NOP14 Antisense RNA 1 2 3 5
  • NOP14 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 4 Open Reading Frame 10 2
  • RES4-24 3
  • C4orf10 3

External Ids for NOP14-AS1 Gene

Previous HGNC Symbols for NOP14-AS1 Gene

  • C4orf10

Summaries for NOP14-AS1 Gene

GeneCards Summary for NOP14-AS1 Gene

NOP14-AS1 (NOP14 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NOP14-AS1 Gene

Genomics for NOP14-AS1 Gene

Regulatory Elements for NOP14-AS1 Gene

Enhancers for NOP14-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around NOP14-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for NOP14-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around NOP14-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NOP14-AS1 Gene

Chromosome:
4
Start:
2,934,899 bp from pter
End:
2,961,738 bp from pter
Size:
26,840 bases
Orientation:
Plus strand

Genomic View for NOP14-AS1 Gene

Genes around NOP14-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NOP14-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NOP14-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOP14-AS1 Gene

Proteins for NOP14-AS1 Gene

Post-translational modifications for NOP14-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NOP14-AS1 Gene

Domains & Families for NOP14-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NOP14-AS1 Gene

Function for NOP14-AS1 Gene

Phenotypes for NOP14-AS1 Gene

genes like me logo Genes that share phenotypes with NOP14-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NOP14-AS1 Gene

Localization for NOP14-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NOP14-AS1 Gene

Pathways & Interactions for NOP14-AS1 Gene

SuperPathways for NOP14-AS1 Gene

No Data Available

Interacting Proteins for NOP14-AS1 Gene

Gene Ontology (GO) - Biological Process for NOP14-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NOP14-AS1 Gene

Drugs & Compounds for NOP14-AS1 Gene

No Compound Related Data Available

Transcripts for NOP14-AS1 Gene

mRNA/cDNA for NOP14-AS1 Gene

(8) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NOP14-AS1 Gene

NOP14 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NOP14-AS1 Gene

No ASD Table

Relevant External Links for NOP14-AS1 Gene

GeneLoc Exon Structure for
NOP14-AS1
ECgene alternative splicing isoforms for
NOP14-AS1

Expression for NOP14-AS1 Gene

mRNA expression in normal human tissues for NOP14-AS1 Gene

SOURCE GeneReport for Unigene cluster for NOP14-AS1 Gene Hs.398178

genes like me logo Genes that share expression patterns with NOP14-AS1: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for NOP14-AS1 Gene

Orthologs for NOP14-AS1 Gene

Evolution for NOP14-AS1 Gene

ENSEMBL:
Gene Tree for NOP14-AS1 (if available)
TreeFam:
Gene Tree for NOP14-AS1 (if available)

No data available for Orthologs for NOP14-AS1 Gene

Paralogs for NOP14-AS1 Gene

No data available for Paralogs for NOP14-AS1 Gene

Variants for NOP14-AS1 Gene

Sequence variations from dbSNP and Humsavar for NOP14-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1263338 -- 2,937,291(-) GCCCT(A/G)GTACG nc-transcript-variant
rs2798287 -- 2,936,924(-) TTGGA(G/T)ATGAG nc-transcript-variant
rs10030687 -- 2,936,960(+) CCAGC(A/G)CTGTC nc-transcript-variant
rs35331318 -- 2,937,431(+) ATCCC(-/C)TGGGG nc-transcript-variant
rs116765105 -- 2,937,076(+) CTCTG(G/T)TCCAG nc-transcript-variant

Relevant External Links for NOP14-AS1 Gene

HapMap Linkage Disequilibrium report
NOP14-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NOP14-AS1 Gene

Disorders for NOP14-AS1 Gene

Relevant External Links for NOP14-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NOP14-AS1

No disorders were found for NOP14-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NOP14-AS1 Gene

Publications for NOP14-AS1 Gene

  1. The primary structure and genomic organization of five novel transcripts located close to the Huntington's disease gene on human chromosome 4p16.3. (PMID: 9734812) Hadano S. … Ikeda J.-E. (DNA Res. 1998) 2 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for NOP14-AS1 Gene

Sources for NOP14-AS1 Gene

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