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Aliases for NOL8 Gene

Aliases for NOL8 Gene

  • Nucleolar Protein 8 2 3
  • NOP132 3 4 6
  • Nucleolar Protein Nop132 3 4
  • C9orf34 3 4
  • Chromosome 9 Open Reading Frame 34 2
  • BA62C3.3 3
  • BA62C3.4 3

External Ids for NOL8 Gene

Previous Symbols for NOL8 Gene

  • C9orf34

Summaries for NOL8 Gene

Entrez Gene Summary for NOL8 Gene

  • NOL8 binds Ras-related GTP-binding proteins (see MIM 608267) and plays a role in cell growth (Sekiguchi et al., 2004 [PubMed 14660641]).[supplied by OMIM, Mar 2008]

GeneCards Summary for NOL8 Gene

NOL8 (Nucleolar Protein 8) is a Protein Coding gene. GO annotations related to this gene include RNA binding and nucleotide binding.

UniProtKB/Swiss-Prot for NOL8 Gene

  • Plays an essential role in the survival of diffuse-type gastric cancer cells. Acts as a nucleolar anchoring protein for DDX47. May be involved in regulation of gene expression at the post-transcriptional level or in ribosome biogenesis in cancer cells.

Gene Wiki entry for NOL8 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NOL8 Gene

Genomics for NOL8 Gene

Genomic Location for NOL8 Gene

Start:
92,297,358 bp from pter
End:
92,325,636 bp from pter
Size:
28,279 bases
Orientation:
Minus strand

Genomic View for NOL8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NOL8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOL8 Gene

Regulatory Elements for NOL8 Gene

Proteins for NOL8 Gene

  • Protein details for NOL8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q76FK4-NOL8_HUMAN
    Recommended name:
    Nucleolar protein 8
    Protein Accession:
    Q76FK4
    Secondary Accessions:
    • Q5TCC7
    • Q5TCC8
    • Q5TCD3
    • Q5TCD5
    • Q5TCD6
    • Q5TCD7
    • Q76D35
    • Q7L3E2
    • Q9H586
    • Q9H795
    • Q9H7W7
    • Q9H9J6
    • Q9NWA4
    • Q9NWM4

    Protein attributes for NOL8 Gene

    Size:
    1167 amino acids
    Molecular mass:
    131616 Da
    Quaternary structure:
    • Interacts with the GTP form of RRAGA, RRAGC and RRAGD. Interacts with NIP7. Interacts with DDX18; the interaction is RNA-dependent. Interacts with DDX47; the interaction is RNA-dependent.
    SequenceCaution:
    • Sequence=BAA91356.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAA91356.1; Type=Frameshift; Positions=1136; Evidence={ECO:0000305}; Sequence=BAB14229.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAB15003.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for NOL8 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NOL8 Gene

Proteomics data for NOL8 Gene at MOPED

Post-translational modifications for NOL8 Gene

No data available for DME Specific Peptides for NOL8 Gene

Domains for NOL8 Gene

Gene Families for NOL8 Gene

HGNC:
  • RBM :RNA binding motif (RRM) containing

Protein Domains for NOL8 Gene

Suggested Antigen Peptide Sequences for NOL8 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q76FK4

UniProtKB/Swiss-Prot:

NOL8_HUMAN
Domain:
  • Contains 1 RRM (RNA recognition motif) domain.:
    • Q76FK4
genes like me logo Genes that share domains with NOL8: view

Function for NOL8 Gene

Molecular function for NOL8 Gene

UniProtKB/Swiss-Prot Function: Plays an essential role in the survival of diffuse-type gastric cancer cells. Acts as a nucleolar anchoring protein for DDX47. May be involved in regulation of gene expression at the post-transcriptional level or in ribosome biogenesis in cancer cells.
UniProtKB/Swiss-Prot Induction: Up-regulated in diffuse-type gastric cancers.

Gene Ontology (GO) - Molecular Function for NOL8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding --
GO:0005515 protein binding IPI 11073942
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with NOL8: view
genes like me logo Genes that share phenotypes with NOL8: view

miRNA for NOL8 Gene

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for NOL8 Gene

Localization for NOL8 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NOL8 Gene

Nucleus, nucleolus. Note=Localizes in the nucleolar-organizing region during ribosome biogenesis.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NOL8 Gene COMPARTMENTS Subcellular localization image for NOL8 gene
Compartment Confidence
nucleus 5
cytosol 2
golgi apparatus 1

Gene Ontology (GO) - Cellular Components for NOL8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IDA --
genes like me logo Genes that share ontologies with NOL8: view

Pathways for NOL8 Gene

SuperPathways for NOL8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NOL8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006260 DNA replication IMP 14660641
GO:0006364 rRNA processing IMP 16963496
GO:0030307 positive regulation of cell growth IMP 14660641
genes like me logo Genes that share ontologies with NOL8: view

No data available for Pathways by source for NOL8 Gene

Compounds for NOL8 Gene

(1) HMDB Compounds for NOL8 Gene

Compound Synonyms Cas Number PubMed IDs
Guanosine triphosphate
  • 5'-GTP
86-01-1
genes like me logo Genes that share compounds with NOL8: view

Transcripts for NOL8 Gene

Unigene Clusters for NOL8 Gene

Nucleolar protein 8:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NOL8 Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6 ^ 7a · 7b · 7c ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^
SP1: - - - - - - - - - - - - - - -
SP2:
SP3: - - - - - -
SP4:
SP5: - - - - - - - - -
SP6: - - - - - - - -
SP7: - - - - - - -
SP8: - - -
SP9: - - - - - -
SP10:
SP11: - - - -
SP12: - - - -
SP13: - -
SP14:
SP15: -
SP16:

ExUns: 15a · 15b ^ 16 ^ 17a · 17b · 17c ^ 18 ^ 19 ^ 20a · 20b ^ 21a · 21b
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10: -
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:

Relevant External Links for NOL8 Gene

GeneLoc Exon Structure for
NOL8
ECgene alternative splicing isoforms for
NOL8

Expression for NOL8 Gene

mRNA expression in normal human tissues for NOL8 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for NOL8 Gene

SOURCE GeneReport for Unigene cluster for NOL8 Gene Hs.442199

mRNA Expression by UniProt/SwissProt for NOL8 Gene

Q76FK4-NOL8_HUMAN
Tissue specificity: Expressed in various diffuse-type gastric cancers. Detected at lower levels in skeletal muscle.
genes like me logo Genes that share expressions with NOL8: view

No data available for mRNA differential expression in normal tissues for NOL8 Gene

Orthologs for NOL8 Gene

This gene was present in the common ancestor of animals.

Orthologs for NOL8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NOL8 35
  • 99.37 (n)
  • 98.63 (a)
NOL8 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 63 (a)
OneToMany
NOL8 35
  • 83.15 (n)
  • 74.46 (a)
NOL8 36
  • 74 (a)
OneToMany
dog
(Canis familiaris)
Mammalia NOL8 35
  • 77.57 (n)
  • 68.08 (a)
NOL8 36
  • 66 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Nol8 35
  • 77.28 (n)
  • 65.43 (a)
Nol8 16
Nol8 36
  • 64 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NOL8 36
  • 44 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NOL8 36
  • 45 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nol8 35
  • 76.93 (n)
  • 64.95 (a)
chicken
(Gallus gallus)
Aves NOL8 35
  • 56.67 (n)
  • 46.09 (a)
NOL8 36
  • 41 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia NOL8 36
  • 40 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.14813 35
zebrafish
(Danio rerio)
Actinopterygii nol8 36
  • 34 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG14230 36
  • 24 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 32 (a)
OneToOne
Species with no ortholog for NOL8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NOL8 Gene

ENSEMBL:
Gene Tree for NOL8 (if available)
TreeFam:
Gene Tree for NOL8 (if available)

Paralogs for NOL8 Gene

Pseudogenes.org Pseudogenes for NOL8 Gene

genes like me logo Genes that share paralogs with NOL8: view

No data available for Paralogs for NOL8 Gene

Variants for NOL8 Gene

Sequence variations from dbSNP and Humsavar for NOL8 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs11116 -- 92,297,726(-) ATTTT(A/T)AAAAT utr-variant-3-prime, nc-transcript-variant
rs15717 - 92,310,625(+) GATTC(C/G)TCATC reference, missense, nc-transcript-variant
rs710162 -- 92,297,508(-) TTTTT(A/T)AATAA utr-variant-3-prime, nc-transcript-variant
rs710163 -- 92,297,522(+) TTCAT(A/G)TAAAC utr-variant-3-prime, nc-transcript-variant
rs921122 - 92,301,665(+) TTTAC(C/T)ACAGT missense, reference, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for NOL8 Gene

Variant ID Type Subtype PubMed ID
nsv893573 CNV Gain 21882294

Relevant External Links for NOL8 Gene

HapMap Linkage Disequilibrium report
NOL8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NOL8 Gene

Disorders for NOL8 Gene

(1) University of Copenhagen DISEASES for NOL8 Gene

Relevant External Links for NOL8

Genetic Association Database (GAD)
NOL8
Human Genome Epidemiology (HuGE) Navigator
NOL8
genes like me logo Genes that share disorders with NOL8: view

No data available for UniProtKB/Swiss-Prot for NOL8 Gene

Publications for NOL8 Gene

  1. A novel human nucleolar protein, Nop132, binds to the G proteins, RRAG A/C/D. (PMID: 14660641) Sekiguchi T. … Nishimoto T. (J. Biol. Chem. 2004) 3 4 23
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. Identification of NOL8, a nucleolar protein containing an RNA recognition motif (RRM), which was overexpressed in diffuse-type gastric cancer. (PMID: 15132771) Jinawath N. … Nakamura Y. (Cancer Sci. 2004) 3 4
  5. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4

Products for NOL8 Gene

Sources for NOL8 Gene

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