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Aliases for NMTRV-TAC1-1 Gene

Subcategory (RNA class) for NMTRV-TAC1-1 Gene

tRNA

Quality Score for this RNA gene is

4

Aliases for NMTRV-TAC1-1 Gene

  • Nuclear-Encoded Mitochondrial Transfer RNA-Val (TAC) 1-1 2 3
  • Transfer RNA Valine 37 (Anticodon UAC) Pseudogene 2 3
  • Nmt-TRNA-Val-TAC-1-1 3
  • TRNAV37P 3

External Ids for NMTRV-TAC1-1 Gene

ORGUL Members for NMTRV-TAC1-1 Gene

Previous HGNC Symbols for NMTRV-TAC1-1 Gene

  • TRNAV37P

Summaries for NMTRV-TAC1-1 Gene

GeneCards Summary for NMTRV-TAC1-1 Gene

NMTRV-TAC1-1 (Nuclear-Encoded Mitochondrial Transfer RNA-Val (TAC) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

fRNAdb sequence ontologies for NMTRV-TAC1-1 Gene

  • tRNA: Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. tRNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNAs corresponding amino acid is attached (by aminoacyl-tRNA synthetases). tRNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for NMTRV-TAC1-1 Gene

Genomics for NMTRV-TAC1-1 Gene

Regulatory Elements for NMTRV-TAC1-1 Gene

Enhancers for NMTRV-TAC1-1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around NMTRV-TAC1-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NMTRV-TAC1-1 Gene

Chromosome:
6
Start:
156,547,912 bp from pter
End:
156,547,986 bp from pter
Size:
75 bases
Orientation:
Minus strand

Genomic View for NMTRV-TAC1-1 Gene

Genes around NMTRV-TAC1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NMTRV-TAC1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NMTRV-TAC1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NMTRV-TAC1-1 Gene

ORGUL Member Location for NMTRV-TAC1-1 Gene

ORGUL Member Location for NMTRV-TAC1-1 gene

Proteins for NMTRV-TAC1-1 Gene

Post-translational modifications for NMTRV-TAC1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NMTRV-TAC1-1 Gene

Domains & Families for NMTRV-TAC1-1 Gene

Gene Families for NMTRV-TAC1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NMTRV-TAC1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NMTRV-TAC1-1 Gene

Function for NMTRV-TAC1-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NMTRV-TAC1-1 Gene

Localization for NMTRV-TAC1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NMTRV-TAC1-1 Gene

Pathways & Interactions for NMTRV-TAC1-1 Gene

SuperPathways for NMTRV-TAC1-1 Gene

No Data Available

Interacting Proteins for NMTRV-TAC1-1 Gene

Gene Ontology (GO) - Biological Process for NMTRV-TAC1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NMTRV-TAC1-1 Gene

Drugs & Compounds for NMTRV-TAC1-1 Gene

No Compound Related Data Available

Transcripts for NMTRV-TAC1-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for NMTRV-TAC1-1 Gene

No ASD Table

Relevant External Links for NMTRV-TAC1-1 Gene

GeneLoc Exon Structure for
NMTRV-TAC1-1
ECgene alternative splicing isoforms for
NMTRV-TAC1-1

No data available for mRNA/cDNA for NMTRV-TAC1-1 Gene

Expression for NMTRV-TAC1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for NMTRV-TAC1-1 Gene

Orthologs for NMTRV-TAC1-1 Gene

No data available for Orthologs and Evolution for NMTRV-TAC1-1 Gene

Paralogs for NMTRV-TAC1-1 Gene

No data available for Paralogs for NMTRV-TAC1-1 Gene

Variants for NMTRV-TAC1-1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for NMTRV-TAC1-1 Gene

Disorders for NMTRV-TAC1-1 Gene

No disorders were found for NMTRV-TAC1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NMTRV-TAC1-1 Gene

Publications for NMTRV-TAC1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 67
  2. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe T.M. … Eddy S.R. (Nucleic Acids Res. 1997) 1
  3. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou Y.M. (Trends Biochem. Sci. 1993) 1

Products for NMTRV-TAC1-1 Gene

Sources for NMTRV-TAC1-1 Gene

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